RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 TM4SF5O14894 197 aa12.37□□□□□ -0.43
CASC4-205ENST00000558735 TGFB1I1O43294 461 aa12.37□□□□□ -0.43
CASC4-205ENST00000558735 HRO43593 1189 aa12.37□□□□□ -0.43
CASC4-205ENST00000558735 HCRTO43612 131 aa12.37□□□□□ -0.43
CASC4-205ENST00000558735 ATP2C2O75185 946 aa12.37□□□□□ -0.43
CASC4-205ENST00000558735 KRT19P08727 400 aa12.37□□□□□ -0.43
CASC4-205ENST00000558735 ZSCAN22P10073 491 aaPredicted RBP12.37□□□□□ -0.43
CASC4-205ENST00000558735 ACAT1P24752 427 aaKnown RBP12.37□□□□□ -0.43
CASC4-205ENST00000558735 CYP2F1P24903 491 aa12.37□□□□□ -0.43
CASC4-205ENST00000558735 CASP1P29466 404 aa12.37□□□□□ -0.43
CASC4-205ENST00000558735 CDC25CP30307 473 aa12.37□□□□□ -0.43
CASC4-205ENST00000558735 CXCL12P48061 93 aa12.37□□□□□ -0.43
CASC4-205ENST00000558735 KPNA1P52294 538 aaPredicted RBP12.37□□□□□ -0.43
CASC4-205ENST00000558735 NFE2Q16621 373 aaPredicted RBP12.37□□□□□ -0.43
CASC4-205ENST00000558735 DDR2Q16832 855 aa12.37□□□□□ -0.43
CASC4-205ENST00000558735 CCDC142Q17RM4 750 aa12.37□□□□□ -0.43
CASC4-205ENST00000558735 ARHGAP29Q52LW3 1261 aa12.37□□□□□ -0.43
CASC4-205ENST00000558735 INTS6LQ5JSJ4 861 aaKnown RBP12.37□□□□□ -0.43
CASC4-205ENST00000558735 SDHAF4Q5VUM1 108 aa12.37□□□□□ -0.43
CASC4-205ENST00000558735 C1orf228Q6PIY5 440 aa12.37□□□□□ -0.43
CASC4-205ENST00000558735 TXNDC11Q6PKC3 985 aa12.37□□□□□ -0.43
CASC4-205ENST00000558735 STXBP4Q6ZWJ1 553 aa12.37□□□□□ -0.43
CASC4-205ENST00000558735 TMEM86AQ8N2M4 240 aa12.37□□□□□ -0.43
CASC4-205ENST00000558735 MAB21L3Q8N8X9 362 aa12.37□□□□□ -0.43
CASC4-205ENST00000558735 STKLD1Q8NE28 680 aa12.37□□□□□ -0.43
CASC4-205ENST00000558735 BPIFB1Q8TDL5 484 aa12.37□□□□□ -0.43
CASC4-205ENST00000558735 CHAMP1Q96JM3 812 aa12.37□□□□□ -0.43
CASC4-205ENST00000558735 MTMR12Q9C0I1 747 aa12.37□□□□□ -0.43
CASC4-205ENST00000558735 SMG9Q9H0W8 520 aaKnown RBP12.37□□□□□ -0.43
CASC4-205ENST00000558735 GKN1Q9NS71 199 aa12.37□□□□□ -0.43
CASC4-205ENST00000558735 HSPBP1Q9NZL4 362 aa12.37□□□□□ -0.43
CASC4-205ENST00000558735 ANGPTL2Q9UKU9 493 aa12.37□□□□□ -0.43
CASC4-205ENST00000558735 PCDHA7Q9UN72 937 aa12.37□□□□□ -0.43
CASC4-205ENST00000558735 ATRXP46100 2492 aa12.37□□□□□ -0.43
CASC4-205ENST00000558735 FAM208BQ5VWN6 2430 aa12.37□□□□□ -0.43
CASC4-205ENST00000558735 CNOT1A5YKK6 2376 aaKnown RBP12.36□□□□□ -0.43
CASC4-205ENST00000558735 SPECC1L-ADORA2AF8WAN1 911 aa12.36□□□□□ -0.43
CASC4-205ENST00000558735 K7ESF4 209 aa12.36□□□□□ -0.43
CASC4-205ENST00000558735 CLIC2O15247 247 aa12.36□□□□□ -0.43
CASC4-205ENST00000558735 EIF3DO15371 548 aaKnown RBP eCLIP12.36□□□□□ -0.43
CASC4-205ENST00000558735 POLR2DO15514 142 aaKnown RBP12.36□□□□□ -0.43
CASC4-205ENST00000558735 CST3P01034 146 aaPredicted RBP12.36□□□□□ -0.43
CASC4-205ENST00000558735 TMEM191BP0C7N4 346 aa12.36□□□□□ -0.43
CASC4-205ENST00000558735 CSH1P0DML2 217 aa12.36□□□□□ -0.43
CASC4-205ENST00000558735 CSH2P0DML3 217 aa12.36□□□□□ -0.43
CASC4-205ENST00000558735 LMO2P25791 158 aa12.36□□□□□ -0.43
CASC4-205ENST00000558735 LHX1P48742 406 aa12.36□□□□□ -0.43
CASC4-205ENST00000558735 ASIC1P78348 528 aa12.36□□□□□ -0.43
CASC4-205ENST00000558735 MYL7Q01449 175 aa12.36□□□□□ -0.43
CASC4-205ENST00000558735 SATB1Q01826 763 aa12.36□□□□□ -0.43
CASC4-205ENST00000558735 TNK2Q07912 1038 aa12.36□□□□□ -0.43
CASC4-205ENST00000558735 EHHADHQ08426 723 aa12.36□□□□□ -0.43
CASC4-205ENST00000558735 SIM2Q14190 667 aaPredicted RBP12.36□□□□□ -0.43
CASC4-205ENST00000558735 SURF1Q15526 300 aa12.36□□□□□ -0.43
CASC4-205ENST00000558735 LPAL2Q16609 132 aa12.36□□□□□ -0.43
CASC4-205ENST00000558735 DUOXA2Q1HG44 320 aa12.36□□□□□ -0.43
CASC4-205ENST00000558735 TXNDC8Q6A555 127 aa12.36□□□□□ -0.43
CASC4-205ENST00000558735 FAM171BQ6P995 826 aa12.36□□□□□ -0.43
CASC4-205ENST00000558735 DPH6Q7L8W6 267 aa12.36□□□□□ -0.43
CASC4-205ENST00000558735 LONP2Q86WA8 852 aa12.36□□□□□ -0.43
CASC4-205ENST00000558735 RALGPS2Q86X27 583 aaPredicted RBP12.36□□□□□ -0.43
CASC4-205ENST00000558735 TOP6BLQ8N6T0 577 aa12.36□□□□□ -0.43
CASC4-205ENST00000558735 RDH13Q8NBN7 331 aa12.36□□□□□ -0.43
CASC4-205ENST00000558735 SPATA18Q8TC71 538 aa12.36□□□□□ -0.43
CASC4-205ENST00000558735 LEO1Q8WVC0 666 aaPredicted RBP12.36□□□□□ -0.43
CASC4-205ENST00000558735 HPDLQ96IR7 371 aa12.36□□□□□ -0.43
CASC4-205ENST00000558735 ANKRD36BP1Q96IX9 119 aa12.36□□□□□ -0.43
CASC4-205ENST00000558735 FAM83CQ9BQN1 747 aa12.36□□□□□ -0.43
CASC4-205ENST00000558735 BLZF1Q9H2G9 400 aa12.36□□□□□ -0.43
CASC4-205ENST00000558735 KIAA1586Q9HCI6 787 aa12.36□□□□□ -0.43
CASC4-205ENST00000558735 ABCB6Q9NP58 842 aa12.36□□□□□ -0.43
CASC4-205ENST00000558735 RBM12Q9NTZ6 932 aaKnown RBP12.36□□□□□ -0.43
CASC4-205ENST00000558735 MAGED2Q9UNF1 606 aaPredicted RBP12.36□□□□□ -0.43
CASC4-205ENST00000558735 CCL26Q9Y258 94 aa12.36□□□□□ -0.43
CASC4-205ENST00000558735 GDF9O60383 454 aa12.35□□□□□ -0.43
CASC4-205ENST00000558735 F13A1P00488 732 aa12.35□□□□□ -0.43
CASC4-205ENST00000558735 PDIA4P13667 645 aaKnown RBP12.35□□□□□ -0.43
CASC4-205ENST00000558735 CTHP32929 405 aa12.35□□□□□ -0.43
CASC4-205ENST00000558735 RPL10AP62906 217 aaKnown RBP12.35□□□□□ -0.43
CASC4-205ENST00000558735 PKP1Q13835 747 aa12.35□□□□□ -0.43
CASC4-205ENST00000558735 FAM26FQ5R3K3 315 aa12.35□□□□□ -0.43
CASC4-205ENST00000558735 PRR23BQ6ZRT6 265 aa12.35□□□□□ -0.43
CASC4-205ENST00000558735 TRAPPC11Q7Z392 1133 aa12.35□□□□□ -0.43
CASC4-205ENST00000558735 MON1AQ86VX9 555 aa12.35□□□□□ -0.43
CASC4-205ENST00000558735 ADGRF2Q8IZF7 708 aa12.35□□□□□ -0.43
CASC4-205ENST00000558735 SCFD1Q8WVM8 642 aa12.35□□□□□ -0.43
CASC4-205ENST00000558735 KBTBD7Q8WVZ9 684 aa12.35□□□□□ -0.43
CASC4-205ENST00000558735 ZNF516Q92618 1163 aa12.35□□□□□ -0.43
CASC4-205ENST00000558735 USP13Q92995 863 aaPredicted RBP12.35□□□□□ -0.43
CASC4-205ENST00000558735 MYRFLQ96LU7 910 aa12.35□□□□□ -0.43
CASC4-205ENST00000558735 GCNAQ96QF7 691 aa12.35□□□□□ -0.43
CASC4-205ENST00000558735 AGPAT3Q9NRZ7 376 aa12.35□□□□□ -0.43
CASC4-205ENST00000558735 THG1LQ9NWX6 298 aaKnown RBP12.35□□□□□ -0.43
CASC4-205ENST00000558735 ZMYM5Q9UJ78 669 aa12.35□□□□□ -0.43
CASC4-205ENST00000558735 RCOR1Q9UKL0 485 aa12.35□□□□□ -0.43
CASC4-205ENST00000558735 TICRRQ7Z2Z1 1910 aa12.35□□□□□ -0.43
CASC4-205ENST00000558735 OTOL1A6NHN0 477 aaPredicted RBP12.34□□□□□ -0.43
CASC4-205ENST00000558735 SOBPA7XYQ1 873 aa12.34□□□□□ -0.43
CASC4-205ENST00000558735 NOL4O94818 638 aa12.34□□□□□ -0.43
CASC4-205ENST00000558735 TNNC2P02585 160 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms