RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 CDC42EP1Q00587 391 aa11.4□□□□□ -0.58
CSPG4P5-201ENST00000558731 SOX4Q06945 474 aaPredicted RBP11.4□□□□□ -0.58
CSPG4P5-201ENST00000558731 PDCLQ13371 301 aa11.4□□□□□ -0.58
CSPG4P5-201ENST00000558731 KYAT1Q16773 422 aa11.4□□□□□ -0.58
CSPG4P5-201ENST00000558731 WDTC1Q8N5D0 677 aa11.4□□□□□ -0.58
CSPG4P5-201ENST00000558731 SH2D3CQ8N5H7 860 aa11.4□□□□□ -0.58
CSPG4P5-201ENST00000558731 KCTD6Q8NC69 237 aa11.4□□□□□ -0.58
CSPG4P5-201ENST00000558731 ARRDC4Q8NCT1 418 aa11.4□□□□□ -0.58
CSPG4P5-201ENST00000558731 NDRG1Q92597 394 aaKnown RBP11.4□□□□□ -0.58
CSPG4P5-201ENST00000558731 GLT1D1Q96MS3 346 aa11.4□□□□□ -0.58
CSPG4P5-201ENST00000558731 NEUROG2Q9H2A3 272 aa11.4□□□□□ -0.58
CSPG4P5-201ENST00000558731 FAM204AQ9H8W3 233 aa11.4□□□□□ -0.58
CSPG4P5-201ENST00000558731 PLXNA1Q9UIW2 1896 aa11.4□□□□□ -0.58
CSPG4P5-201ENST00000558731 KIAA0100Q14667 2235 aaKnown RBP11.4□□□□□ -0.59
CSPG4P5-201ENST00000558731 CLDN5O00501 218 aa11.39□□□□□ -0.59
CSPG4P5-201ENST00000558731 PHF2O75151 1096 aa11.39□□□□□ -0.59
CSPG4P5-201ENST00000558731 B3GAT3O94766 335 aa11.39□□□□□ -0.59
CSPG4P5-201ENST00000558731 ALDH1A1P00352 501 aa11.39□□□□□ -0.59
CSPG4P5-201ENST00000558731 FLT3P36888 993 aa11.39□□□□□ -0.59
CSPG4P5-201ENST00000558731 TAF6P49848 677 aa11.39□□□□□ -0.59
CSPG4P5-201ENST00000558731 ATN1P54259 1190 aaPredicted RBP11.39□□□□□ -0.59
CSPG4P5-201ENST00000558731 CAP1Q01518 475 aa11.39□□□□□ -0.59
CSPG4P5-201ENST00000558731 OGDHQ02218 1023 aa11.39□□□□□ -0.59
CSPG4P5-201ENST00000558731 KRT17Q04695 432 aa11.39□□□□□ -0.59
CSPG4P5-201ENST00000558731 POU5F1BQ06416 359 aa11.39□□□□□ -0.59
CSPG4P5-201ENST00000558731 PHF13Q86YI8 300 aaPredicted RBP11.39□□□□□ -0.59
CSPG4P5-201ENST00000558731 RFX6Q8HWS3 928 aa11.39□□□□□ -0.59
CSPG4P5-201ENST00000558731 HACE1Q8IYU2 909 aa11.39□□□□□ -0.59
CSPG4P5-201ENST00000558731 LRRN4Q8WUT4 740 aa11.39□□□□□ -0.59
CSPG4P5-201ENST00000558731 PIWIL1Q96J94 861 aaKnown RBP11.39□□□□□ -0.59
CSPG4P5-201ENST00000558731 FMO2Q99518 471 aa11.39□□□□□ -0.59
CSPG4P5-201ENST00000558731 STRIP2Q9ULQ0 834 aa11.39□□□□□ -0.59
CSPG4P5-201ENST00000558731 PASKQ96RG2 1323 aa11.39□□□□□ -0.59
CSPG4P5-201ENST00000558731 HADHQ16836 314 aaKnown RBP11.39□□□□□ -0.59
CSPG4P5-201ENST00000558731 SH3PXD2AQ5TCZ1 1133 aa11.39□□□□□ -0.59
CSPG4P5-201ENST00000558731 C9orf57Q5W0N0 161 aa11.39□□□□□ -0.59
CSPG4P5-201ENST00000558731 EMBQ6PCB8 327 aa11.39□□□□□ -0.59
CSPG4P5-201ENST00000558731 MFSD7Q6UXD7 560 aa11.39□□□□□ -0.59
CSPG4P5-201ENST00000558731 RNF180Q86T96 592 aa11.39□□□□□ -0.59
CSPG4P5-201ENST00000558731 SLC2A14Q8TDB8 520 aa11.39□□□□□ -0.59
CSPG4P5-201ENST00000558731 CALR3Q96L12 384 aaKnown RBP11.39□□□□□ -0.59
CSPG4P5-201ENST00000558731 MAK16Q9BXY0 300 aaKnown RBP11.39□□□□□ -0.59
CSPG4P5-201ENST00000558731 SLITRK6Q9H5Y7 841 aa11.39□□□□□ -0.59
CSPG4P5-201ENST00000558731 AGO3Q9H9G7 860 aaKnown RBP11.39□□□□□ -0.59
CSPG4P5-201ENST00000558731 AVENQ9NQS1 362 aaPredicted RBP11.39□□□□□ -0.59
CSPG4P5-201ENST00000558731 PCDH10Q9P2E7 1040 aa11.39□□□□□ -0.59
CSPG4P5-201ENST00000558731 GTF2IRD1Q9UHL9 959 aa11.39□□□□□ -0.59
CSPG4P5-201ENST00000558731 R3HDM2Q9Y2K5 976 aaKnown RBP11.39□□□□□ -0.59
CSPG4P5-201ENST00000558731 TRPV2Q9Y5S1 764 aa11.39□□□□□ -0.59
CSPG4P5-201ENST00000558731 GOLGA6CA6NDK9 693 aa11.39□□□□□ -0.59
CSPG4P5-201ENST00000558731 CYB561D2O14569 222 aa11.39□□□□□ -0.59
CSPG4P5-201ENST00000558731 GOLGA6DP0CG33 693 aa11.39□□□□□ -0.59
CSPG4P5-201ENST00000558731 VDRP11473 427 aa11.39□□□□□ -0.59
CSPG4P5-201ENST00000558731 CYBAP13498 195 aa11.39□□□□□ -0.59
CSPG4P5-201ENST00000558731 ATICP31939 592 aa11.39□□□□□ -0.59
CSPG4P5-201ENST00000558731 SLCO1A2P46721 670 aa11.39□□□□□ -0.59
CSPG4P5-201ENST00000558731 PEX5P50542 639 aa11.39□□□□□ -0.59
CSPG4P5-201ENST00000558731 TTC27Q6P3X3 843 aa11.39□□□□□ -0.59
CSPG4P5-201ENST00000558731 FBXO25Q8TCJ0 367 aa11.39□□□□□ -0.59
CSPG4P5-201ENST00000558731 PPM1EQ8WY54 764 aa11.39□□□□□ -0.59
CSPG4P5-201ENST00000558731 ADAM2Q99965 735 aa11.39□□□□□ -0.59
CSPG4P5-201ENST00000558731 FAM105AQ9NUU6 356 aa11.39□□□□□ -0.59
CSPG4P5-201ENST00000558731 GOLGA6AQ9NYA3 693 aa11.39□□□□□ -0.59
CSPG4P5-201ENST00000558731 HTTP42858 3142 aa11.39□□□□□ -0.59
CSPG4P5-201ENST00000558731 SGK1O00141 431 aa11.38□□□□□ -0.59
CSPG4P5-201ENST00000558731 BCAR1P56945 870 aa11.38□□□□□ -0.59
CSPG4P5-201ENST00000558731 ITIH3Q06033 890 aa11.38□□□□□ -0.59
CSPG4P5-201ENST00000558731 KRT81Q14533 505 aa11.38□□□□□ -0.59
CSPG4P5-201ENST00000558731 WSCD1Q658N2 575 aa11.38□□□□□ -0.59
CSPG4P5-201ENST00000558731 ADGRF2Q8IZF7 708 aa11.38□□□□□ -0.59
CSPG4P5-201ENST00000558731 SH3TC2Q8TF17 1288 aa11.38□□□□□ -0.59
CSPG4P5-201ENST00000558731 CFAP57Q96MR6 1250 aa11.38□□□□□ -0.59
CSPG4P5-201ENST00000558731 ZNF560Q96MR9 790 aa11.38□□□□□ -0.59
CSPG4P5-201ENST00000558731 HERPUD2Q9BSE4 406 aa11.38□□□□□ -0.59
CSPG4P5-201ENST00000558731 TRPV6Q9H1D0 765 aa11.38□□□□□ -0.59
CSPG4P5-201ENST00000558731 PLAAQ9Y263 795 aa11.38□□□□□ -0.59
CSPG4P5-201ENST00000558731 MRPL42Q9Y6G3 142 aaKnown RBP11.38□□□□□ -0.59
CSPG4P5-201ENST00000558731 MBLAC1A4D2B0 266 aaPredicted RBP11.38□□□□□ -0.59
CSPG4P5-201ENST00000558731 GOLGA8MH3BSY2 632 aa11.38□□□□□ -0.59
CSPG4P5-201ENST00000558731 KIF3CO14782 793 aa11.38□□□□□ -0.59
CSPG4P5-201ENST00000558731 SPTLC1O15269 473 aa11.38□□□□□ -0.59
CSPG4P5-201ENST00000558731 GAS8O95995 478 aa11.38□□□□□ -0.59
CSPG4P5-201ENST00000558731 CHRNA3P32297 505 aa11.38□□□□□ -0.59
CSPG4P5-201ENST00000558731 COILP38432 576 aaPredicted RBP11.38□□□□□ -0.59
CSPG4P5-201ENST00000558731 SLC1A1P43005 524 aa11.38□□□□□ -0.59
CSPG4P5-201ENST00000558731 RNASELQ05823 741 aaKnown RBP11.38□□□□□ -0.59
CSPG4P5-201ENST00000558731 SF3A3Q12874 501 aaKnown RBP eCLIP11.38□□□□□ -0.59
CSPG4P5-201ENST00000558731 ZDHHC14Q8IZN3 488 aa11.38□□□□□ -0.59
CSPG4P5-201ENST00000558731 WHAMMQ8TF30 809 aa11.38□□□□□ -0.59
CSPG4P5-201ENST00000558731 AENQ8WTP8 325 aaKnown RBP11.38□□□□□ -0.59
CSPG4P5-201ENST00000558731 RAPGEF5Q92565 580 aa11.38□□□□□ -0.59
CSPG4P5-201ENST00000558731 ZIM3Q96PE6 472 aa11.38□□□□□ -0.59
CSPG4P5-201ENST00000558731 FAM107BQ9H098 131 aa11.38□□□□□ -0.59
CSPG4P5-201ENST00000558731 PADI3Q9ULW8 664 aa11.38□□□□□ -0.59
CSPG4P5-201ENST00000558731 F5H423 210 aaPredicted RBP11.38□□□□□ -0.59
CSPG4P5-201ENST00000558731 CSPG5O95196 566 aa11.38□□□□□ -0.59
CSPG4P5-201ENST00000558731 LSM8O95777 96 aaKnown RBP11.38□□□□□ -0.59
CSPG4P5-201ENST00000558731 CD4P01730 458 aa11.38□□□□□ -0.59
CSPG4P5-201ENST00000558731 DESP17661 470 aa11.38□□□□□ -0.59
CSPG4P5-201ENST00000558731 ZNF132P52740 706 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms