RNA–Protein interactions for RNA: ENST00000558471.5

LRRC28-206, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-206ENST00000558471 COL25A1Q9BXS0 654 aaPredicted RBP13.31□□□□□ -0.28
LRRC28-206ENST00000558471 B3GNT5Q9BYG0 378 aa13.31□□□□□ -0.28
LRRC28-206ENST00000558471 ELOVL4Q9GZR5 314 aa13.31□□□□□ -0.28
LRRC28-206ENST00000558471 CISHQ9NSE2 258 aa13.31□□□□□ -0.28
LRRC28-206ENST00000558471 A0A0C4DFX4 3053 aa13.31□□□□□ -0.28
LRRC28-206ENST00000558471 NCOR1O75376 2440 aa13.3□□□□□ -0.28
LRRC28-206ENST00000558471 C2CD4DB7Z1M9 353 aa13.3□□□□□ -0.28
LRRC28-206ENST00000558471 CLDN5O00501 218 aa13.3□□□□□ -0.28
LRRC28-206ENST00000558471 PRKCSHP14314 528 aaPredicted RBP13.3□□□□□ -0.28
LRRC28-206ENST00000558471 SLC9A1P19634 815 aa13.3□□□□□ -0.28
LRRC28-206ENST00000558471 FSHRP23945 695 aa13.3□□□□□ -0.28
LRRC28-206ENST00000558471 MAGEA11P43364 429 aa13.3□□□□□ -0.28
LRRC28-206ENST00000558471 DDR2Q16832 855 aa13.3□□□□□ -0.28
LRRC28-206ENST00000558471 SLC5A9Q2M3M2 681 aa13.3□□□□□ -0.28
LRRC28-206ENST00000558471 ZSCAN23Q3MJ62 389 aa13.3□□□□□ -0.28
LRRC28-206ENST00000558471 ZNF394Q53GI3 561 aa13.3□□□□□ -0.28
LRRC28-206ENST00000558471 SDHAF4Q5VUM1 108 aa13.3□□□□□ -0.28
LRRC28-206ENST00000558471 IQCEQ6IPM2 695 aa13.3□□□□□ -0.28
LRRC28-206ENST00000558471 PHLDB3Q6NSJ2 640 aa13.3□□□□□ -0.28
LRRC28-206ENST00000558471 PAQR9Q6ZVX9 377 aa13.3□□□□□ -0.28
LRRC28-206ENST00000558471 GJD3Q8N144 294 aa13.3□□□□□ -0.28
LRRC28-206ENST00000558471 C12orf29Q8N999 325 aa13.3□□□□□ -0.28
LRRC28-206ENST00000558471 ITFG1Q8TB96 612 aa13.3□□□□□ -0.28
LRRC28-206ENST00000558471 FAM200AQ8TCP9 573 aa13.3□□□□□ -0.28
LRRC28-206ENST00000558471 KAT5Q92993 513 aa13.3□□□□□ -0.28
LRRC28-206ENST00000558471 BPIFA3Q9BQP9 254 aa13.3□□□□□ -0.28
LRRC28-206ENST00000558471 NT5C1AQ9BXI3 368 aa13.3□□□□□ -0.28
LRRC28-206ENST00000558471 LRRC3Q9BY71 257 aa13.3□□□□□ -0.28
LRRC28-206ENST00000558471 ZNF518BQ9C0D4 1074 aa13.3□□□□□ -0.28
LRRC28-206ENST00000558471 NAT10Q9H0A0 1025 aaKnown RBP13.3□□□□□ -0.28
LRRC28-206ENST00000558471 INTS2Q9H0H0 1204 aaKnown RBP13.3□□□□□ -0.28
LRRC28-206ENST00000558471 HSD3B7Q9H2F3 369 aa13.3□□□□□ -0.28
LRRC28-206ENST00000558471 NDST4Q9H3R1 872 aa13.3□□□□□ -0.28
LRRC28-206ENST00000558471 GCNT4Q9P109 453 aa13.3□□□□□ -0.28
LRRC28-206ENST00000558471 USTQ9Y2C2 406 aa13.3□□□□□ -0.28
LRRC28-206ENST00000558471 NR2E1Q9Y466 385 aa13.3□□□□□ -0.28
LRRC28-206ENST00000558471 ASB3Q9Y575 518 aa13.3□□□□□ -0.28
LRRC28-206ENST00000558471 DENND4CQ5VZ89 1909 aa13.29□□□□□ -0.28
LRRC28-206ENST00000558471 VCANP13611 3396 aa13.29□□□□□ -0.28
LRRC28-206ENST00000558471 TBXAS1P24557 533 aaPredicted RBP13.29□□□□□ -0.28
LRRC28-206ENST00000558471 SSTR3P32745 418 aaPredicted RBP13.29□□□□□ -0.28
LRRC28-206ENST00000558471 GRIK1P39086 918 aa13.29□□□□□ -0.28
LRRC28-206ENST00000558471 CCR2P41597 374 aa13.29□□□□□ -0.28
LRRC28-206ENST00000558471 ZNF165P49910 485 aa13.29□□□□□ -0.28
LRRC28-206ENST00000558471 CACNA2D1P54289 1103 aa13.29□□□□□ -0.28
LRRC28-206ENST00000558471 RAD23BP54727 409 aa13.29□□□□□ -0.28
LRRC28-206ENST00000558471 EPHA5P54756 1037 aa13.29□□□□□ -0.28
LRRC28-206ENST00000558471 RPL10AP62906 217 aaKnown RBP13.29□□□□□ -0.28
LRRC28-206ENST00000558471 VEPH1Q14D04 833 aa13.29□□□□□ -0.28
LRRC28-206ENST00000558471 KRT31Q15323 416 aa13.29□□□□□ -0.28
LRRC28-206ENST00000558471 PRSS36Q5K4E3 855 aa13.29□□□□□ -0.28
LRRC28-206ENST00000558471 CYP4A22Q5TCH4 519 aa13.29□□□□□ -0.28
LRRC28-206ENST00000558471 VSTM1Q6UX27 236 aa13.29□□□□□ -0.28
LRRC28-206ENST00000558471 GBP6Q6ZN66 633 aa13.29□□□□□ -0.28
LRRC28-206ENST00000558471 RRAGAQ7L523 313 aa13.29□□□□□ -0.28
LRRC28-206ENST00000558471 GET4Q7L5D6 327 aaPredicted RBP13.29□□□□□ -0.28
LRRC28-206ENST00000558471 OTOP3Q7RTS5 596 aa13.29□□□□□ -0.28
LRRC28-206ENST00000558471 ITIH5Q86UX2 942 aa13.29□□□□□ -0.28
LRRC28-206ENST00000558471 ARHGEF19Q8IW93 802 aa13.29□□□□□ -0.28
LRRC28-206ENST00000558471 SCN4BQ8IWT1 228 aa13.29□□□□□ -0.28
LRRC28-206ENST00000558471 DHX40Q8IX18 779 aaKnown RBP13.29□□□□□ -0.28
LRRC28-206ENST00000558471 FUKQ8N0W3 1084 aa13.29□□□□□ -0.28
LRRC28-206ENST00000558471 PPM1KQ8N3J5 372 aa13.29□□□□□ -0.28
LRRC28-206ENST00000558471 TTC39CQ8N584 583 aa13.29□□□□□ -0.28
LRRC28-206ENST00000558471 AOPEPQ8N6M6 819 aa13.29□□□□□ -0.28
LRRC28-206ENST00000558471 UBR7Q8N806 425 aa13.29□□□□□ -0.28
LRRC28-206ENST00000558471 STKLD1Q8NE28 680 aa13.29□□□□□ -0.28
LRRC28-206ENST00000558471 PSMG2Q969U7 264 aa13.29□□□□□ -0.28
LRRC28-206ENST00000558471 TCEAL4Q96EI5 215 aa13.29□□□□□ -0.28
LRRC28-206ENST00000558471 MYADMQ96S97 322 aa13.29□□□□□ -0.28
LRRC28-206ENST00000558471 FAM124BQ9H5Z6 455 aaPredicted RBP13.29□□□□□ -0.28
LRRC28-206ENST00000558471 ZNF334Q9HCZ1 680 aaPredicted RBP13.29□□□□□ -0.28
LRRC28-206ENST00000558471 AVENQ9NQS1 362 aaPredicted RBP13.29□□□□□ -0.28
LRRC28-206ENST00000558471 TMEM30AQ9NV96 361 aa13.29□□□□□ -0.28
LRRC28-206ENST00000558471 TAB2Q9NYJ8 693 aa13.29□□□□□ -0.28
LRRC28-206ENST00000558471 MRPS23Q9Y3D9 190 aaKnown RBP13.29□□□□□ -0.28
LRRC28-206ENST00000558471 ZNF638Q14966 1978 aaKnown RBP13.29□□□□□ -0.28
LRRC28-206ENST00000558471 GTPBP10A4D1E9 387 aaKnown RBP13.28□□□□□ -0.28
LRRC28-206ENST00000558471 NRG2O14511 850 aaPredicted RBP13.28□□□□□ -0.28
LRRC28-206ENST00000558471 MOSPD3O75425 235 aa13.28□□□□□ -0.28
LRRC28-206ENST00000558471 MYL4P12829 197 aa13.28□□□□□ -0.28
LRRC28-206ENST00000558471 CCDC130P13994 396 aa13.28□□□□□ -0.28
LRRC28-206ENST00000558471 ZNF18P17022 549 aa13.28□□□□□ -0.28
LRRC28-206ENST00000558471 HMGA1P17096 107 aaKnown RBP13.28□□□□□ -0.28
LRRC28-206ENST00000558471 GJA1P17302 382 aa13.28□□□□□ -0.28
LRRC28-206ENST00000558471 ACO1P21399 889 aaKnown RBP13.28□□□□□ -0.28
LRRC28-206ENST00000558471 PON1P27169 355 aa13.28□□□□□ -0.28
LRRC28-206ENST00000558471 GBP2P32456 591 aaPredicted RBP13.28□□□□□ -0.28
LRRC28-206ENST00000558471 APBA1Q02410 837 aa13.28□□□□□ -0.28
LRRC28-206ENST00000558471 KCNMA1Q12791 1236 aa13.28□□□□□ -0.28
LRRC28-206ENST00000558471 MTMR3Q13615 1198 aa13.28□□□□□ -0.28
LRRC28-206ENST00000558471 EXOC3L4Q17RC7 722 aa13.28□□□□□ -0.28
LRRC28-206ENST00000558471 TRIM65Q6PJ69 517 aa13.28□□□□□ -0.28
LRRC28-206ENST00000558471 POTEHQ6S545 545 aa13.28□□□□□ -0.28
LRRC28-206ENST00000558471 PDZD4Q76G19 769 aaPredicted RBP13.28□□□□□ -0.28
LRRC28-206ENST00000558471 TMC8Q8IU68 726 aa13.28□□□□□ -0.28
LRRC28-206ENST00000558471 ZDHHC14Q8IZN3 488 aa13.28□□□□□ -0.28
LRRC28-206ENST00000558471 TDRD5Q8NAT2 981 aaKnown RBP13.28□□□□□ -0.28
LRRC28-206ENST00000558471 SLC4A11Q8NBS3 891 aa13.28□□□□□ -0.28
LRRC28-206ENST00000558471 LEMD2Q8NC56 503 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms