RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 LZTS1Q9Y250 596 aa11.74□□□□□ -0.53
PCAT29-201ENST00000558411 DENND3A2RUS2 1198 aa11.74□□□□□ -0.53
PCAT29-201ENST00000558411 C2orf71A6NGG8 1288 aa11.74□□□□□ -0.53
PCAT29-201ENST00000558411 SUPT3HO75486 399 aa11.74□□□□□ -0.53
PCAT29-201ENST00000558411 FAM155BO75949 473 aa11.74□□□□□ -0.53
PCAT29-201ENST00000558411 PDE1BQ01064 536 aa11.74□□□□□ -0.53
PCAT29-201ENST00000558411 KDSRQ06136 332 aa11.74□□□□□ -0.53
PCAT29-201ENST00000558411 PPP3CAQ08209 521 aa11.74□□□□□ -0.53
PCAT29-201ENST00000558411 GPS1Q13098 491 aa11.74□□□□□ -0.53
PCAT29-201ENST00000558411 CCNIQ14094 377 aa11.74□□□□□ -0.53
PCAT29-201ENST00000558411 KRT81Q14533 505 aa11.74□□□□□ -0.53
PCAT29-201ENST00000558411 LPIN1Q14693 890 aa11.74□□□□□ -0.53
PCAT29-201ENST00000558411 HIF1AQ16665 826 aa11.74□□□□□ -0.53
PCAT29-201ENST00000558411 CCDC92Q53HC0 331 aaPredicted RBP11.74□□□□□ -0.53
PCAT29-201ENST00000558411 KLHL35Q6PF15 583 aa11.74□□□□□ -0.53
PCAT29-201ENST00000558411 DHRS4L2Q6PKH6 230 aa11.74□□□□□ -0.53
PCAT29-201ENST00000558411 Q6ZNX1 250 aa11.74□□□□□ -0.53
PCAT29-201ENST00000558411 FAM178BQ8IXR5 827 aa11.74□□□□□ -0.53
PCAT29-201ENST00000558411 RAB3IL1Q8TBN0 382 aa11.74□□□□□ -0.53
PCAT29-201ENST00000558411 PYDC1Q8WXC3 89 aa11.74□□□□□ -0.53
PCAT29-201ENST00000558411 MRRFQ96E11 262 aaKnown RBP11.74□□□□□ -0.53
PCAT29-201ENST00000558411 KREMEN1Q96MU8 473 aa11.74□□□□□ -0.53
PCAT29-201ENST00000558411 YIPF2Q9BWQ6 316 aa11.74□□□□□ -0.53
PCAT29-201ENST00000558411 SENP6Q9GZR1 1112 aaPredicted RBP11.74□□□□□ -0.53
PCAT29-201ENST00000558411 TUFT1Q9NNX1 390 aa11.74□□□□□ -0.53
PCAT29-201ENST00000558411 GPCPD1Q9NPB8 672 aa11.74□□□□□ -0.53
PCAT29-201ENST00000558411 TFCP2L1Q9NZI6 479 aa11.74□□□□□ -0.53
PCAT29-201ENST00000558411 KCND2Q9NZV8 630 aa11.74□□□□□ -0.53
PCAT29-201ENST00000558411 VAV3Q9UKW4 847 aa11.74□□□□□ -0.53
PCAT29-201ENST00000558411 MAD1L1Q9Y6D9 718 aa11.74□□□□□ -0.53
PCAT29-201ENST00000558411 KANSL1LA0AUZ9 987 aa11.73□□□□□ -0.53
PCAT29-201ENST00000558411 DCAF8L1A6NGE4 600 aa11.73□□□□□ -0.53
PCAT29-201ENST00000558411 CCDC160A6NGH7 325 aa11.73□□□□□ -0.53
PCAT29-201ENST00000558411 SFI1A8K8P3 1242 aa11.73□□□□□ -0.53
PCAT29-201ENST00000558411 TXNDC9O14530 226 aa11.73□□□□□ -0.53
PCAT29-201ENST00000558411 GRIN3BO60391 1043 aa11.73□□□□□ -0.53
PCAT29-201ENST00000558411 CBFA2T3O75081 653 aa11.73□□□□□ -0.53
PCAT29-201ENST00000558411 ADRA2BP18089 450 aa11.73□□□□□ -0.53
PCAT29-201ENST00000558411 MLH1P40692 756 aa11.73□□□□□ -0.53
PCAT29-201ENST00000558411 NR1H2P55055 460 aa11.73□□□□□ -0.53
PCAT29-201ENST00000558411 NCKAP1LP55160 1127 aa11.73□□□□□ -0.53
PCAT29-201ENST00000558411 OXCT1P55809 520 aa11.73□□□□□ -0.53
PCAT29-201ENST00000558411 MCCD1P59942 119 aaPredicted RBP11.73□□□□□ -0.53
PCAT29-201ENST00000558411 APOFQ13790 326 aa11.73□□□□□ -0.53
PCAT29-201ENST00000558411 TRIP10Q15642 601 aa11.73□□□□□ -0.53
PCAT29-201ENST00000558411 MYLK3Q32MK0 819 aa11.73□□□□□ -0.53
PCAT29-201ENST00000558411 HSF5Q4G112 596 aaPredicted RBP11.73□□□□□ -0.53
PCAT29-201ENST00000558411 PRR16Q569H4 304 aa11.73□□□□□ -0.53
PCAT29-201ENST00000558411 GPATCH4Q5T3I0 446 aaKnown RBP11.73□□□□□ -0.53
PCAT29-201ENST00000558411 ATG16L1Q676U5 607 aa11.73□□□□□ -0.53
PCAT29-201ENST00000558411 PGM2L1Q6PCE3 622 aa11.73□□□□□ -0.53
PCAT29-201ENST00000558411 CAPN12Q6ZSI9 719 aa11.73□□□□□ -0.53
PCAT29-201ENST00000558411 TSHZ1Q6ZSZ6 1077 aa11.73□□□□□ -0.53
PCAT29-201ENST00000558411 C3orf62Q6ZUJ4 267 aa11.73□□□□□ -0.53
PCAT29-201ENST00000558411 TMEM126BQ8IUX1 230 aa11.73□□□□□ -0.53
PCAT29-201ENST00000558411 KSR1Q8IVT5 923 aa11.73□□□□□ -0.53
PCAT29-201ENST00000558411 C12orf56Q8IXR9 622 aa11.73□□□□□ -0.53
PCAT29-201ENST00000558411 SLC25A41Q8N5S1 370 aa11.73□□□□□ -0.53
PCAT29-201ENST00000558411 PYROXD1Q8WU10 500 aa11.73□□□□□ -0.53
PCAT29-201ENST00000558411 DDX1Q92499 740 aaKnown RBP11.73□□□□□ -0.53
PCAT29-201ENST00000558411 KAT5Q92993 513 aa11.73□□□□□ -0.53
PCAT29-201ENST00000558411 TTC17Q96AE7 1141 aa11.73□□□□□ -0.53
PCAT29-201ENST00000558411 BIRC8Q96P09 236 aa11.73□□□□□ -0.53
PCAT29-201ENST00000558411 UIMC1Q96RL1 719 aa11.73□□□□□ -0.53
PCAT29-201ENST00000558411 EIF2AK1Q9BQI3 630 aaKnown RBP11.73□□□□□ -0.53
PCAT29-201ENST00000558411 SIKE1Q9BRV8 207 aa11.73□□□□□ -0.53
PCAT29-201ENST00000558411 STRA6Q9BX79 667 aa11.73□□□□□ -0.53
PCAT29-201ENST00000558411 OXCT2Q9BYC2 517 aaPredicted RBP11.73□□□□□ -0.53
PCAT29-201ENST00000558411 FHDC1Q9C0D6 1143 aaPredicted RBP11.73□□□□□ -0.53
PCAT29-201ENST00000558411 ALG13Q9NP73 1137 aaKnown RBP11.73□□□□□ -0.53
PCAT29-201ENST00000558411 SH3PXD2BA1X283 911 aa11.72□□□□□ -0.53
PCAT29-201ENST00000558411 BMP3P12645 472 aa11.72□□□□□ -0.53
PCAT29-201ENST00000558411 GLRA2P23416 452 aa11.72□□□□□ -0.53
PCAT29-201ENST00000558411 POLD1P28340 1107 aa11.72□□□□□ -0.53
PCAT29-201ENST00000558411 DLG4P78352 724 aa11.72□□□□□ -0.53
PCAT29-201ENST00000558411 PPIDQ08752 370 aaKnown RBP11.72□□□□□ -0.53
PCAT29-201ENST00000558411 NCOA4Q13772 614 aa11.72□□□□□ -0.53
PCAT29-201ENST00000558411 TFDP1Q14186 410 aa11.72□□□□□ -0.53
PCAT29-201ENST00000558411 TLR1Q15399 786 aa11.72□□□□□ -0.53
PCAT29-201ENST00000558411 LRRC36Q1X8D7 754 aa11.72□□□□□ -0.53
PCAT29-201ENST00000558411 HP1BP3Q5SSJ5 553 aaPredicted RBP11.72□□□□□ -0.53
PCAT29-201ENST00000558411 LRRC8BQ6P9F7 803 aa11.72□□□□□ -0.53
PCAT29-201ENST00000558411 TRIM67Q6ZTA4 783 aa11.72□□□□□ -0.53
PCAT29-201ENST00000558411 SH2D5Q6ZV89 423 aa11.72□□□□□ -0.53
PCAT29-201ENST00000558411 ZNF410Q86VK4 478 aa11.72□□□□□ -0.53
PCAT29-201ENST00000558411 ERI1Q8IV48 349 aaKnown RBP11.72□□□□□ -0.53
PCAT29-201ENST00000558411 MCOLN2Q8IZK6 566 aa11.72□□□□□ -0.53
PCAT29-201ENST00000558411 CEP70Q8NHQ1 597 aa11.72□□□□□ -0.53
PCAT29-201ENST00000558411 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.72□□□□□ -0.53
PCAT29-201ENST00000558411 SLC26A7Q8TE54 656 aa11.72□□□□□ -0.53
PCAT29-201ENST00000558411 SNRNP27Q8WVK2 155 aaKnown RBP11.72□□□□□ -0.53
PCAT29-201ENST00000558411 LENG9Q96B70 501 aa11.72□□□□□ -0.53
PCAT29-201ENST00000558411 FAM111AQ96PZ2 611 aa11.72□□□□□ -0.53
PCAT29-201ENST00000558411 MPHOSPH6Q99547 160 aaKnown RBP11.72□□□□□ -0.53
PCAT29-201ENST00000558411 PCDH9Q9HC56 1237 aa11.72□□□□□ -0.53
PCAT29-201ENST00000558411 C6orf203Q9P0P8 240 aaPredicted RBP11.72□□□□□ -0.53
PCAT29-201ENST00000558411 DTNAQ9Y4J8 743 aa11.72□□□□□ -0.53
PCAT29-201ENST00000558411 AK5Q9Y6K8 562 aa11.72□□□□□ -0.53
PCAT29-201ENST00000558411 MYH14Q7Z406 1995 aaKnown RBP11.72□□□□□ -0.53
PCAT29-201ENST00000558411 LOXHD1Q8IVV2 1947 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms