RNA–Protein interactions for RNA: ENST00000558376.5

RABGGTA-204, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-204ENST00000558376 EML5Q05BV3 1969 aa12.04□□□□□ -0.48
RABGGTA-204ENST00000558376 ZNF638Q14966 1978 aaKnown RBP12.04□□□□□ -0.48
RABGGTA-204ENST00000558376 SOAT2O75908 522 aa12.04□□□□□ -0.48
RABGGTA-204ENST00000558376 FAM13AO94988 1023 aa12.04□□□□□ -0.48
RABGGTA-204ENST00000558376 PTMAP06454 111 aaKnown RBP12.04□□□□□ -0.48
RABGGTA-204ENST00000558376 CXCL8P10145 99 aa12.04□□□□□ -0.48
RABGGTA-204ENST00000558376 LRPAP1P30533 357 aa12.04□□□□□ -0.48
RABGGTA-204ENST00000558376 CTHP32929 405 aa12.04□□□□□ -0.48
RABGGTA-204ENST00000558376 CNR2P34972 360 aa12.04□□□□□ -0.48
RABGGTA-204ENST00000558376 AARSP49588 968 aaKnown RBP eCLIP12.04□□□□□ -0.48
RABGGTA-204ENST00000558376 EPHB3P54753 998 aa12.04□□□□□ -0.48
RABGGTA-204ENST00000558376 YWHAHQ04917 246 aaPredicted RBP12.04□□□□□ -0.48
RABGGTA-204ENST00000558376 PON2Q15165 354 aa12.04□□□□□ -0.48
RABGGTA-204ENST00000558376 DGKKQ5KSL6 1271 aa12.04□□□□□ -0.48
RABGGTA-204ENST00000558376 CENPPQ6IPU0 288 aa12.04□□□□□ -0.48
RABGGTA-204ENST00000558376 APTXQ7Z2E3 356 aaKnown RBP12.04□□□□□ -0.48
RABGGTA-204ENST00000558376 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.04□□□□□ -0.48
RABGGTA-204ENST00000558376 GUF1Q8N442 669 aaKnown RBP12.04□□□□□ -0.48
RABGGTA-204ENST00000558376 CSGALNACT2Q8N6G5 542 aa12.04□□□□□ -0.48
RABGGTA-204ENST00000558376 TTC9BQ8N6N2 239 aa12.04□□□□□ -0.48
RABGGTA-204ENST00000558376 ATAD1Q8NBU5 361 aa12.04□□□□□ -0.48
RABGGTA-204ENST00000558376 MSANTD3Q96H12 275 aa12.04□□□□□ -0.48
RABGGTA-204ENST00000558376 DRC1Q96MC2 740 aa12.04□□□□□ -0.48
RABGGTA-204ENST00000558376 TMEM209Q96SK2 561 aa12.04□□□□□ -0.48
RABGGTA-204ENST00000558376 INTS13Q9NVM9 706 aa12.04□□□□□ -0.48
RABGGTA-204ENST00000558376 ANKFY1Q9P2R3 1169 aa12.04□□□□□ -0.48
RABGGTA-204ENST00000558376 CEP295Q9C0D2 2601 aa12.04□□□□□ -0.48
RABGGTA-204ENST00000558376 SCN1AP35498 2009 aa12.03□□□□□ -0.48
RABGGTA-204ENST00000558376 DENND4CQ5VZ89 1909 aa12.03□□□□□ -0.48
RABGGTA-204ENST00000558376 TEX33O43247 280 aa12.03□□□□□ -0.48
RABGGTA-204ENST00000558376 TOM1L1O75674 476 aa12.03□□□□□ -0.48
RABGGTA-204ENST00000558376 GPR17Q13304 367 aa12.03□□□□□ -0.48
RABGGTA-204ENST00000558376 ARID5BQ14865 1188 aa12.03□□□□□ -0.48
RABGGTA-204ENST00000558376 NOLC1Q14978 699 aaKnown RBP eCLIP12.03□□□□□ -0.48
RABGGTA-204ENST00000558376 DNAJB7Q7Z6W7 309 aaPredicted RBP12.03□□□□□ -0.48
RABGGTA-204ENST00000558376 WDR5BQ86VZ2 330 aa12.03□□□□□ -0.48
RABGGTA-204ENST00000558376 TMEM161BQ8NDZ6 487 aa12.03□□□□□ -0.48
RABGGTA-204ENST00000558376 SPIRE2Q8WWL2 714 aa12.03□□□□□ -0.48
RABGGTA-204ENST00000558376 MRFAP1L1Q96HT8 127 aa12.03□□□□□ -0.48
RABGGTA-204ENST00000558376 FIZ1Q96SL8 496 aa12.03□□□□□ -0.48
RABGGTA-204ENST00000558376 C17orf75Q9HAS0 396 aa12.03□□□□□ -0.48
RABGGTA-204ENST00000558376 PARVGQ9HBI0 331 aa12.03□□□□□ -0.48
RABGGTA-204ENST00000558376 TTC26A0AVF1 554 aa12.02□□□□□ -0.48
RABGGTA-204ENST00000558376 OR6C75A6NL08 312 aa12.02□□□□□ -0.48
RABGGTA-204ENST00000558376 PPEF2O14830 753 aa12.02□□□□□ -0.48
RABGGTA-204ENST00000558376 AXIN1O15169 862 aa12.02□□□□□ -0.48
RABGGTA-204ENST00000558376 GCNT3O95395 438 aa12.02□□□□□ -0.48
RABGGTA-204ENST00000558376 MAPTP10636 758 aaKnown RBP12.02□□□□□ -0.48
RABGGTA-204ENST00000558376 GUCY2CP25092 1073 aa12.02□□□□□ -0.48
RABGGTA-204ENST00000558376 HOXA6P31267 233 aa12.02□□□□□ -0.48
RABGGTA-204ENST00000558376 MCL1Q07820 350 aa12.02□□□□□ -0.48
RABGGTA-204ENST00000558376 TNK2Q07912 1038 aa12.02□□□□□ -0.48
RABGGTA-204ENST00000558376 PKN3Q6P5Z2 889 aa12.02□□□□□ -0.48
RABGGTA-204ENST00000558376 CEP68Q76N32 757 aa12.02□□□□□ -0.48
RABGGTA-204ENST00000558376 CCDC186Q7Z3E2 898 aa12.02□□□□□ -0.48
RABGGTA-204ENST00000558376 FILIP1Q7Z7B0 1213 aa12.02□□□□□ -0.48
RABGGTA-204ENST00000558376 RALGPS2Q86X27 583 aaPredicted RBP12.02□□□□□ -0.48
RABGGTA-204ENST00000558376 TRIM44Q96DX7 344 aaPredicted RBP12.02□□□□□ -0.48
RABGGTA-204ENST00000558376 KIF12Q96FN5 646 aa12.02□□□□□ -0.48
RABGGTA-204ENST00000558376 VPS16Q9H269 839 aa12.02□□□□□ -0.48
RABGGTA-204ENST00000558376 MTMR11A4FU01 709 aa12.02□□□□□ -0.49
RABGGTA-204ENST00000558376 LACTBL1A8MY62 500 aa12.02□□□□□ -0.49
RABGGTA-204ENST00000558376 KCNJ18B7U540 433 aa12.02□□□□□ -0.49
RABGGTA-204ENST00000558376 TM4SF5O14894 197 aa12.02□□□□□ -0.49
RABGGTA-204ENST00000558376 EXTL3O43909 919 aa12.02□□□□□ -0.49
RABGGTA-204ENST00000558376 PRAMEF12O95522 483 aa12.02□□□□□ -0.49
RABGGTA-204ENST00000558376 CLTAP09496 248 aa12.02□□□□□ -0.49
RABGGTA-204ENST00000558376 KCNA4P22459 653 aa12.02□□□□□ -0.49
RABGGTA-204ENST00000558376 TNFSF9P41273 254 aa12.02□□□□□ -0.49
RABGGTA-204ENST00000558376 ALDH1A3P47895 512 aa12.02□□□□□ -0.49
RABGGTA-204ENST00000558376 CDR1P51861 262 aa12.02□□□□□ -0.49
RABGGTA-204ENST00000558376 STRN3Q13033 797 aa12.02□□□□□ -0.49
RABGGTA-204ENST00000558376 PLD1Q13393 1074 aa12.02□□□□□ -0.49
RABGGTA-204ENST00000558376 CCINQ13939 588 aa12.02□□□□□ -0.49
RABGGTA-204ENST00000558376 KCNJ12Q14500 433 aa12.02□□□□□ -0.49
RABGGTA-204ENST00000558376 NR1I3Q14994 352 aa12.02□□□□□ -0.49
RABGGTA-204ENST00000558376 KRT31Q15323 416 aa12.02□□□□□ -0.49
RABGGTA-204ENST00000558376 SF3A2Q15428 464 aaKnown RBP12.02□□□□□ -0.49
RABGGTA-204ENST00000558376 CCDC6Q16204 474 aa12.02□□□□□ -0.49
RABGGTA-204ENST00000558376 ARHGAP29Q52LW3 1261 aa12.02□□□□□ -0.49
RABGGTA-204ENST00000558376 COBLL1Q53SF7 1204 aa12.02□□□□□ -0.49
RABGGTA-204ENST00000558376 TCP11X2Q5H9J9 407 aa12.02□□□□□ -0.49
RABGGTA-204ENST00000558376 GPR158Q5T848 1215 aa12.02□□□□□ -0.49
RABGGTA-204ENST00000558376 N4BP2L1Q5TBK1 243 aaPredicted RBP12.02□□□□□ -0.49
RABGGTA-204ENST00000558376 C1orf228Q6PIY5 440 aa12.02□□□□□ -0.49
RABGGTA-204ENST00000558376 ZPBP2Q6X784 338 aa12.02□□□□□ -0.49
RABGGTA-204ENST00000558376 DSTYKQ6XUX3 929 aa12.02□□□□□ -0.49
RABGGTA-204ENST00000558376 EPM2AIP1Q7L775 607 aaPredicted RBP12.02□□□□□ -0.49
RABGGTA-204ENST00000558376 ZNF720Q7Z2F6 126 aa12.02□□□□□ -0.49
RABGGTA-204ENST00000558376 KCTD10Q9H3F6 313 aa12.02□□□□□ -0.49
RABGGTA-204ENST00000558376 ATXN3LQ9H3M9 355 aa12.02□□□□□ -0.49
RABGGTA-204ENST00000558376 PLEKHA5Q9HAU0 1116 aa12.02□□□□□ -0.49
RABGGTA-204ENST00000558376 RXFP3Q9NSD7 469 aa12.02□□□□□ -0.49
RABGGTA-204ENST00000558376 TAB2Q9NYJ8 693 aa12.02□□□□□ -0.49
RABGGTA-204ENST00000558376 CLDN3O15551 220 aa12.01□□□□□ -0.49
RABGGTA-204ENST00000558376 PLS3P13797 630 aa12.01□□□□□ -0.49
RABGGTA-204ENST00000558376 GABRR2P28476 465 aa12.01□□□□□ -0.49
RABGGTA-204ENST00000558376 PXNP49023 591 aaPredicted RBP12.01□□□□□ -0.49
RABGGTA-204ENST00000558376 ZNF131P52739 623 aa12.01□□□□□ -0.49
RABGGTA-204ENST00000558376 MYBPC2Q14324 1141 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms