RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 TP53BP2Q13625 1128 aa14.5□□□□□ -0.09
SPG11-210ENST00000558319 TRIM48Q8IWZ4 208 aa14.5□□□□□ -0.09
SPG11-210ENST00000558319 INTS13Q9NVM9 706 aa14.5□□□□□ -0.09
SPG11-210ENST00000558319 LCMT1Q9UIC8 334 aa14.5□□□□□ -0.09
SPG11-210ENST00000558319 PVALEFA0A1B0GWK0 134 aa14.5□□□□□ -0.09
SPG11-210ENST00000558319 A0A1W2PQC6 194 aa14.5□□□□□ -0.09
SPG11-210ENST00000558319 PIPSLA2A3N6 862 aa14.5□□□□□ -0.09
SPG11-210ENST00000558319 PGK2P07205 417 aa14.5□□□□□ -0.09
SPG11-210ENST00000558319 ITGB6P18564 788 aa14.5□□□□□ -0.09
SPG11-210ENST00000558319 SLC18A3Q16572 532 aa14.5□□□□□ -0.09
SPG11-210ENST00000558319 CARNMT1Q8N4J0 409 aa14.5□□□□□ -0.09
SPG11-210ENST00000558319 CALML6Q8TD86 181 aa14.5□□□□□ -0.09
SPG11-210ENST00000558319 ROGDIQ9GZN7 287 aa14.5□□□□□ -0.09
SPG11-210ENST00000558319 IGFLR1Q9H665 355 aa14.5□□□□□ -0.09
SPG11-210ENST00000558319 SLC25A13Q9UJS0 675 aa14.5□□□□□ -0.09
SPG11-210ENST00000558319 NLRP1Q9C000 1473 aa14.5□□□□□ -0.09
SPG11-210ENST00000558319 ATP12AP54707 1039 aa14.5□□□□□ -0.09
SPG11-210ENST00000558319 NCOA4Q13772 614 aa14.5□□□□□ -0.09
SPG11-210ENST00000558319 NFIL3Q16649 462 aa14.5□□□□□ -0.09
SPG11-210ENST00000558319 ALKBH2Q6NS38 261 aa14.5□□□□□ -0.09
SPG11-210ENST00000558319 SCUBE1Q8IWY4 988 aa14.5□□□□□ -0.09
SPG11-210ENST00000558319 RAB42Q8N4Z0 105 aa14.5□□□□□ -0.09
SPG11-210ENST00000558319 UBASH3BQ8TF42 649 aa14.5□□□□□ -0.09
SPG11-210ENST00000558319 ANKRD49Q8WVL7 239 aa14.5□□□□□ -0.09
SPG11-210ENST00000558319 ARHGEF26Q96DR7 871 aa14.5□□□□□ -0.09
SPG11-210ENST00000558319 GINS4Q9BRT9 223 aa14.5□□□□□ -0.09
SPG11-210ENST00000558319 HDHD2Q9H0R4 259 aa14.5□□□□□ -0.09
SPG11-210ENST00000558319 PMPCBO75439 489 aa14.49□□□□□ -0.09
SPG11-210ENST00000558319 PSMA4P25789 261 aaKnown RBP14.49□□□□□ -0.09
SPG11-210ENST00000558319 CACNA2D1P54289 1103 aa14.49□□□□□ -0.09
SPG11-210ENST00000558319 ARHGAP22Q7Z5H3 698 aa14.49□□□□□ -0.09
SPG11-210ENST00000558319 REXO1L1PQ8IX06 675 aa14.49□□□□□ -0.09
SPG11-210ENST00000558319 C19orf18Q8NEA5 215 aa14.49□□□□□ -0.09
SPG11-210ENST00000558319 CASKIN2Q8WXE0 1202 aa14.49□□□□□ -0.09
SPG11-210ENST00000558319 THUMPD3Q9BV44 507 aaKnown RBP14.49□□□□□ -0.09
SPG11-210ENST00000558319 DNMT1P26358 1616 aaKnown RBP14.49□□□□□ -0.09
SPG11-210ENST00000558319 TTLL13PA6NNM8 815 aa14.49□□□□□ -0.09
SPG11-210ENST00000558319 UBE2Q2LH0YL09 131 aa14.49□□□□□ -0.09
SPG11-210ENST00000558319 FAM200BP0CF97 657 aa14.49□□□□□ -0.09
SPG11-210ENST00000558319 HOXA7P31268 230 aaPredicted RBP14.49□□□□□ -0.09
SPG11-210ENST00000558319 GALNTL6Q49A17 601 aa14.49□□□□□ -0.09
SPG11-210ENST00000558319 LPCAT2Q7L5N7 544 aa14.49□□□□□ -0.09
SPG11-210ENST00000558319 KLHL4Q9C0H6 718 aa14.49□□□□□ -0.09
SPG11-210ENST00000558319 MRPL39Q9NYK5 338 aaKnown RBP14.49□□□□□ -0.09
SPG11-210ENST00000558319 OTOAQ7RTW8 1153 aa14.49□□□□□ -0.09
SPG11-210ENST00000558319 KIAA1586Q9HCI6 787 aa14.49□□□□□ -0.09
SPG11-210ENST00000558319 LSM7Q9UK45 103 aaKnown RBP14.49□□□□□ -0.09
SPG11-210ENST00000558319 CYP19A1P11511 503 aaPredicted RBP14.49□□□□□ -0.09
SPG11-210ENST00000558319 PTPN7P35236 360 aa14.49□□□□□ -0.09
SPG11-210ENST00000558319 C18orf8Q96DM3 657 aa14.49□□□□□ -0.09
SPG11-210ENST00000558319 TRIM24O15164 1050 aa14.49□□□□□ -0.09
SPG11-210ENST00000558319 ASNA1O43681 348 aa14.49□□□□□ -0.09
SPG11-210ENST00000558319 TRIM13O60858 407 aa14.49□□□□□ -0.09
SPG11-210ENST00000558319 GTF2H1P32780 548 aa14.49□□□□□ -0.09
SPG11-210ENST00000558319 HUNKP57058 714 aa14.49□□□□□ -0.09
SPG11-210ENST00000558319 AASDHQ4L235 1098 aaPredicted RBP14.49□□□□□ -0.09
SPG11-210ENST00000558319 GNASQ5JWF2 1037 aa14.49□□□□□ -0.09
SPG11-210ENST00000558319 ARMC6Q6NXE6 501 aa14.49□□□□□ -0.09
SPG11-210ENST00000558319 MIB1Q86YT6 1006 aa14.49□□□□□ -0.09
SPG11-210ENST00000558319 MYCBPAPQ8TBZ2 947 aa14.49□□□□□ -0.09
SPG11-210ENST00000558319 NARS2Q96I59 477 aaKnown RBP14.49□□□□□ -0.09
SPG11-210ENST00000558319 MKNK1Q9BUB5 465 aa14.49□□□□□ -0.09
SPG11-210ENST00000558319 NMRK2Q9NPI5 230 aa14.49□□□□□ -0.09
SPG11-210ENST00000558319 IL1RAPL1Q9NZN1 696 aa14.49□□□□□ -0.09
SPG11-210ENST00000558319 MPP6Q9NZW5 540 aa14.49□□□□□ -0.09
SPG11-210ENST00000558319 CCL15-CCL14A0A0B4J2E2 113 aa14.48□□□□□ -0.09
SPG11-210ENST00000558319 CCL15Q16663 113 aa14.48□□□□□ -0.09
SPG11-210ENST00000558319 KLHL17Q6TDP4 642 aa14.48□□□□□ -0.09
SPG11-210ENST00000558319 DEPDC7Q96QD5 511 aa14.48□□□□□ -0.09
SPG11-210ENST00000558319 IPPQ9Y573 584 aa14.48□□□□□ -0.09
SPG11-210ENST00000558319 NPC1L1Q9UHC9 1359 aa14.48□□□□□ -0.09
SPG11-210ENST00000558319 ITGB3P05106 788 aa14.48□□□□□ -0.09
SPG11-210ENST00000558319 RALBP11234 206 aa14.48□□□□□ -0.09
SPG11-210ENST00000558319 FLT3P36888 993 aa14.48□□□□□ -0.09
SPG11-210ENST00000558319 HSPA13P48723 471 aa14.48□□□□□ -0.09
SPG11-210ENST00000558319 KCNMA1Q12791 1236 aa14.48□□□□□ -0.09
SPG11-210ENST00000558319 FAM71DQ8N9W8 422 aa14.48□□□□□ -0.09
SPG11-210ENST00000558319 BLOC1S5Q8TDH9 187 aa14.48□□□□□ -0.09
SPG11-210ENST00000558319 SLC30A1Q9Y6M5 507 aa14.48□□□□□ -0.09
SPG11-210ENST00000558319 BIVM-ERCC5R4GMW8 1640 aa14.48□□□□□ -0.09
SPG11-210ENST00000558319 P4HA2O15460 535 aa14.48□□□□□ -0.09
SPG11-210ENST00000558319 SH3BGRLO75368 114 aa14.48□□□□□ -0.09
SPG11-210ENST00000558319 SNRPAP09012 282 aaKnown RBP14.48□□□□□ -0.09
SPG11-210ENST00000558319 SFNP31947 248 aa14.48□□□□□ -0.09
SPG11-210ENST00000558319 PRKCEQ02156 737 aa14.48□□□□□ -0.09
SPG11-210ENST00000558319 SGSM1Q2NKQ1 1148 aa14.48□□□□□ -0.09
SPG11-210ENST00000558319 PIH1D1Q9NWS0 290 aaKnown RBP14.48□□□□□ -0.09
SPG11-210ENST00000558319 SLC39A10Q9ULF5 831 aa14.48□□□□□ -0.09
SPG11-210ENST00000558319 C3orf70A6NLC5 250 aaPredicted RBP14.48□□□□□ -0.09
SPG11-210ENST00000558319 ATP6V1B2P21281 511 aa14.48□□□□□ -0.09
SPG11-210ENST00000558319 SLC1A1P43005 524 aa14.48□□□□□ -0.09
SPG11-210ENST00000558319 C11orf88Q6PI97 169 aa14.48□□□□□ -0.09
SPG11-210ENST00000558319 DENND5BQ6ZUT9 1274 aa14.48□□□□□ -0.09
SPG11-210ENST00000558319 FOPNLQ96NB1 174 aa14.48□□□□□ -0.09
SPG11-210ENST00000558319 TMEM79Q9BSE2 394 aa14.48□□□□□ -0.09
SPG11-210ENST00000558319 C6orf62Q9GZU0 229 aaPredicted RBP14.48□□□□□ -0.09
SPG11-210ENST00000558319 FAM25AB3EWG3 89 aa14.48□□□□□ -0.09
SPG11-210ENST00000558319 FAM25CB3EWG5 89 aa14.48□□□□□ -0.09
SPG11-210ENST00000558319 FAM25GB3EWG6 89 aa14.48□□□□□ -0.09
SPG11-210ENST00000558319 SNPHO15079 494 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms