RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 NLRC4Q9NPP4 1024 aa11.13□□□□□ -0.63
LRRC28-204ENST00000558172 MAN1C1Q9NR34 630 aa11.13□□□□□ -0.63
LRRC28-204ENST00000558172 TMLHEQ9NVH6 421 aa11.13□□□□□ -0.63
LRRC28-204ENST00000558172 ZDHHC7Q9NXF8 308 aa11.13□□□□□ -0.63
LRRC28-204ENST00000558172 HMGXB4Q9UGU5 601 aa11.13□□□□□ -0.63
LRRC28-204ENST00000558172 MYO6Q9UM54 1294 aa11.13□□□□□ -0.63
LRRC28-204ENST00000558172 DOCK6Q96HP0 2047 aa11.13□□□□□ -0.63
LRRC28-204ENST00000558172 C2orf16Q68DN1 1984 aa11.12□□□□□ -0.63
LRRC28-204ENST00000558172 DENND4CQ5VZ89 1909 aa11.12□□□□□ -0.63
LRRC28-204ENST00000558172 A0A1W2PQJ5 194 aa11.12□□□□□ -0.63
LRRC28-204ENST00000558172 SPDYE4A6NLX3 237 aa11.12□□□□□ -0.63
LRRC28-204ENST00000558172 F8VZ95 297 aa11.12□□□□□ -0.63
LRRC28-204ENST00000558172 RNF225M0QZC1 329 aaPredicted RBP11.12□□□□□ -0.63
LRRC28-204ENST00000558172 ZMYND10O75800 440 aa11.12□□□□□ -0.63
LRRC28-204ENST00000558172 SEC24AO95486 1093 aa11.12□□□□□ -0.63
LRRC28-204ENST00000558172 LRG1P02750 347 aa11.12□□□□□ -0.63
LRRC28-204ENST00000558172 C8AP07357 584 aa11.12□□□□□ -0.63
LRRC28-204ENST00000558172 HNRNPA1P09651 372 aaKnown RBP eCLIP11.12□□□□□ -0.63
LRRC28-204ENST00000558172 CCDC172P0C7W6 258 aa11.12□□□□□ -0.63
LRRC28-204ENST00000558172 SPATA31D3P0C874 917 aa11.12□□□□□ -0.63
LRRC28-204ENST00000558172 HAPLN1P10915 354 aaPredicted RBP11.12□□□□□ -0.63
LRRC28-204ENST00000558172 CD19P15391 556 aa11.12□□□□□ -0.63
LRRC28-204ENST00000558172 HOXA9P31269 272 aa11.12□□□□□ -0.63
LRRC28-204ENST00000558172 USP8P40818 1118 aa11.12□□□□□ -0.63
LRRC28-204ENST00000558172 ALDH1A3P47895 512 aa11.12□□□□□ -0.63
LRRC28-204ENST00000558172 JAM2P57087 298 aa11.12□□□□□ -0.63
LRRC28-204ENST00000558172 RPL10AP62906 217 aaKnown RBP11.12□□□□□ -0.63
LRRC28-204ENST00000558172 ORC1Q13415 861 aa11.12□□□□□ -0.63
LRRC28-204ENST00000558172 TRIM14Q14142 442 aa11.12□□□□□ -0.63
LRRC28-204ENST00000558172 CCDC85BQ15834 202 aaPredicted RBP11.12□□□□□ -0.63
LRRC28-204ENST00000558172 CNGA2Q16280 664 aa11.12□□□□□ -0.63
LRRC28-204ENST00000558172 PPM1LQ5SGD2 360 aa11.12□□□□□ -0.63
LRRC28-204ENST00000558172 SPECC1LQ69YQ0 1117 aa11.12□□□□□ -0.63
LRRC28-204ENST00000558172 ANKRD54Q6NXT1 300 aa11.12□□□□□ -0.63
LRRC28-204ENST00000558172 SPATA31D4Q6ZUB0 917 aa11.12□□□□□ -0.63
LRRC28-204ENST00000558172 VSTM4Q8IW00 320 aa11.12□□□□□ -0.63
LRRC28-204ENST00000558172 FAM71AQ8IYT1 594 aa11.12□□□□□ -0.63
LRRC28-204ENST00000558172 C12orf29Q8N999 325 aa11.12□□□□□ -0.63
LRRC28-204ENST00000558172 ATAD1Q8NBU5 361 aa11.12□□□□□ -0.63
LRRC28-204ENST00000558172 ZNF397Q8NF99 534 aaPredicted RBP11.12□□□□□ -0.63
LRRC28-204ENST00000558172 CMASQ8NFW8 434 aaPredicted RBP11.12□□□□□ -0.63
LRRC28-204ENST00000558172 B3GNT5Q9BYG0 378 aa11.12□□□□□ -0.63
LRRC28-204ENST00000558172 RHOBTB2Q9BYZ6 727 aa11.12□□□□□ -0.63
LRRC28-204ENST00000558172 GPR88Q9GZN0 384 aa11.12□□□□□ -0.63
LRRC28-204ENST00000558172 NUCKS1Q9H1E3 243 aaKnown RBP11.12□□□□□ -0.63
LRRC28-204ENST00000558172 SFXN1Q9H9B4 322 aa11.12□□□□□ -0.63
LRRC28-204ENST00000558172 CLDND1Q9NY35 253 aa11.12□□□□□ -0.63
LRRC28-204ENST00000558172 ABI2Q9NYB9 513 aaPredicted RBP11.12□□□□□ -0.63
LRRC28-204ENST00000558172 AJAP1Q9UKB5 411 aaPredicted RBP11.12□□□□□ -0.63
LRRC28-204ENST00000558172 COG5Q9UP83 839 aa11.12□□□□□ -0.63
LRRC28-204ENST00000558172 ASB3Q9Y575 518 aa11.12□□□□□ -0.63
LRRC28-204ENST00000558172 PATJQ8NI35 1801 aa11.12□□□□□ -0.63
LRRC28-204ENST00000558172 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.11□□□□□ -0.63
LRRC28-204ENST00000558172 TRIM66O15016 1216 aa11.11□□□□□ -0.63
LRRC28-204ENST00000558172 EPHB6O15197 1021 aa11.11□□□□□ -0.63
LRRC28-204ENST00000558172 LINC01565O15544 149 aa11.11□□□□□ -0.63
LRRC28-204ENST00000558172 AP5Z1O43299 807 aa11.11□□□□□ -0.63
LRRC28-204ENST00000558172 MED7O43513 233 aa11.11□□□□□ -0.63
LRRC28-204ENST00000558172 PAPLNO95428 1278 aa11.11□□□□□ -0.63
LRRC28-204ENST00000558172 VNN2O95498 520 aa11.11□□□□□ -0.63
LRRC28-204ENST00000558172 GLP2RO95838 553 aa11.11□□□□□ -0.63
LRRC28-204ENST00000558172 POU2F2P09086 479 aa11.11□□□□□ -0.63
LRRC28-204ENST00000558172 BDNFP23560 247 aa11.11□□□□□ -0.63
LRRC28-204ENST00000558172 CYP2F1P24903 491 aa11.11□□□□□ -0.63
LRRC28-204ENST00000558172 GNA15P30679 374 aa11.11□□□□□ -0.63
LRRC28-204ENST00000558172 CLCN1P35523 988 aa11.11□□□□□ -0.63
LRRC28-204ENST00000558172 SOX5P35711 763 aa11.11□□□□□ -0.63
LRRC28-204ENST00000558172 EPHB3P54753 998 aa11.11□□□□□ -0.63
LRRC28-204ENST00000558172 SLC8A3P57103 927 aa11.11□□□□□ -0.63
LRRC28-204ENST00000558172 SKIV2LQ15477 1246 aaKnown RBP11.11□□□□□ -0.63
LRRC28-204ENST00000558172 MEA1Q16626 185 aa11.11□□□□□ -0.63
LRRC28-204ENST00000558172 MGAT5BQ3V5L5 792 aa11.11□□□□□ -0.63
LRRC28-204ENST00000558172 PPP1R26Q5T8A7 1209 aaPredicted RBP11.11□□□□□ -0.63
LRRC28-204ENST00000558172 PAQR9Q6ZVX9 377 aa11.11□□□□□ -0.63
LRRC28-204ENST00000558172 FAM35AQ86V20 835 aa11.11□□□□□ -0.63
LRRC28-204ENST00000558172 FUKQ8N0W3 1084 aa11.11□□□□□ -0.63
LRRC28-204ENST00000558172 ELMOD1Q8N336 334 aa11.11□□□□□ -0.63
LRRC28-204ENST00000558172 VN1R2Q8NFZ6 395 aa11.11□□□□□ -0.63
LRRC28-204ENST00000558172 MAFAQ8NHW3 353 aaPredicted RBP11.11□□□□□ -0.63
LRRC28-204ENST00000558172 SLC7A14Q8TBB6 771 aa11.11□□□□□ -0.63
LRRC28-204ENST00000558172 SLC2A14Q8TDB8 520 aa11.11□□□□□ -0.63
LRRC28-204ENST00000558172 PPM1EQ8WY54 764 aa11.11□□□□□ -0.63
LRRC28-204ENST00000558172 SMARCD1Q96GM5 515 aa11.11□□□□□ -0.63
LRRC28-204ENST00000558172 MRFAP1L1Q96HT8 127 aa11.11□□□□□ -0.63
LRRC28-204ENST00000558172 C8orf48Q96LL4 319 aa11.11□□□□□ -0.63
LRRC28-204ENST00000558172 SEPT5Q99719 369 aaPredicted RBP11.11□□□□□ -0.63
LRRC28-204ENST00000558172 LPIN3Q9BQK8 851 aa11.11□□□□□ -0.63
LRRC28-204ENST00000558172 PRKD2Q9BZL6 878 aa11.11□□□□□ -0.63
LRRC28-204ENST00000558172 TTYH3Q9C0H2 523 aa11.11□□□□□ -0.63
LRRC28-204ENST00000558172 FAM49BQ9NUQ9 324 aa11.11□□□□□ -0.63
LRRC28-204ENST00000558172 HESX1Q9UBX0 185 aa11.11□□□□□ -0.63
LRRC28-204ENST00000558172 SLC27A5Q9Y2P5 690 aa11.11□□□□□ -0.63
LRRC28-204ENST00000558172 INSL5Q9Y5Q6 135 aa11.11□□□□□ -0.63
LRRC28-204ENST00000558172 CCDC195A0A1B0GUA6 201 aa11.1□□□□□ -0.63
LRRC28-204ENST00000558172 GOLGA6L3A6NEY3 463 aa11.1□□□□□ -0.63
LRRC28-204ENST00000558172 CYP26A1O43174 497 aa11.1□□□□□ -0.63
LRRC28-204ENST00000558172 XYLBO75191 536 aa11.1□□□□□ -0.63
LRRC28-204ENST00000558172 AP1G2O75843 785 aa11.1□□□□□ -0.63
LRRC28-204ENST00000558172 TPM1P09493 284 aa11.1□□□□□ -0.63
LRRC28-204ENST00000558172 FAM200BP0CF97 657 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms