RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 TKTP29401 623 aaKnown RBP21.57■■□□□ 1.04
SNRPA1-205ENST00000558036 CKAP4Q07065 602 aaKnown RBP21.57■■□□□ 1.04
SNRPA1-205ENST00000558036 C2orf54Q08AI8 447 aa21.57■■□□□ 1.04
SNRPA1-205ENST00000558036 XYLT1Q86Y38 959 aa21.57■■□□□ 1.04
SNRPA1-205ENST00000558036 GOLGA1Q92805 767 aa21.57■■□□□ 1.04
SNRPA1-205ENST00000558036 HESX1Q9UBX0 185 aa21.57■■□□□ 1.04
SNRPA1-205ENST00000558036 E5RJQ4 531 aa21.56■■□□□ 1.04
SNRPA1-205ENST00000558036 CLDN5O00501 218 aa21.56■■□□□ 1.04
SNRPA1-205ENST00000558036 CXCL10P02778 98 aa21.56■■□□□ 1.04
SNRPA1-205ENST00000558036 PDE4CQ08493 712 aa21.56■■□□□ 1.04
SNRPA1-205ENST00000558036 ZNF211Q13398 564 aaPredicted RBP21.56■■□□□ 1.04
SNRPA1-205ENST00000558036 STILQ15468 1287 aa21.56■■□□□ 1.04
SNRPA1-205ENST00000558036 ARHGAP17Q68EM7 881 aa21.56■■□□□ 1.04
SNRPA1-205ENST00000558036 DCUN1D2Q6PH85 259 aa21.56■■□□□ 1.04
SNRPA1-205ENST00000558036 C3orf20Q8ND61 904 aa21.56■■□□□ 1.04
SNRPA1-205ENST00000558036 APBB2Q92870 758 aa21.56■■□□□ 1.04
SNRPA1-205ENST00000558036 CD101Q93033 1021 aa21.56■■□□□ 1.04
SNRPA1-205ENST00000558036 TNIP3Q96KP6 325 aa21.56■■□□□ 1.04
SNRPA1-205ENST00000558036 RNF216Q9NWF9 866 aaPredicted RBP21.56■■□□□ 1.04
SNRPA1-205ENST00000558036 TDRD15B5MCY1 1934 aaKnown RBP21.56■■□□□ 1.04
SNRPA1-205ENST00000558036 TMEM191CA6NGB0 347 aa21.56■■□□□ 1.04
SNRPA1-205ENST00000558036 DYNC1I1O14576 645 aa21.56■■□□□ 1.04
SNRPA1-205ENST00000558036 PTPN1P18031 435 aaKnown RBP21.56■■□□□ 1.04
SNRPA1-205ENST00000558036 OGDHQ02218 1023 aa21.56■■□□□ 1.04
SNRPA1-205ENST00000558036 DSC1Q08554 894 aa21.56■■□□□ 1.04
SNRPA1-205ENST00000558036 PPP1R15BQ5SWA1 713 aa21.56■■□□□ 1.04
SNRPA1-205ENST00000558036 AADACL2Q6P093 401 aa21.56■■□□□ 1.04
SNRPA1-205ENST00000558036 ABI1Q8IZP0 508 aa21.56■■□□□ 1.04
SNRPA1-205ENST00000558036 PIWIL1Q96J94 861 aaKnown RBP21.56■■□□□ 1.04
SNRPA1-205ENST00000558036 STRIP2Q9ULQ0 834 aa21.56■■□□□ 1.04
SNRPA1-205ENST00000558036 PRG3Q9Y2Y8 225 aaPredicted RBP21.56■■□□□ 1.04
SNRPA1-205ENST00000558036 OR1G1P47890 313 aa21.55■■□□□ 1.04
SNRPA1-205ENST00000558036 ZNF252P-AS1Q0IIN9 211 aa21.55■■□□□ 1.04
SNRPA1-205ENST00000558036 CFAP221Q4G0U5 840 aa21.55■■□□□ 1.04
SNRPA1-205ENST00000558036 MDH1BQ5I0G3 518 aa21.55■■□□□ 1.04
SNRPA1-205ENST00000558036 COLGALT2Q8IYK4 626 aa21.55■■□□□ 1.04
SNRPA1-205ENST00000558036 JOSD2Q8TAC2 188 aa21.55■■□□□ 1.04
SNRPA1-205ENST00000558036 SLC35F5Q8WV83 523 aa21.55■■□□□ 1.04
SNRPA1-205ENST00000558036 RSPH1Q8WYR4 309 aa21.55■■□□□ 1.04
SNRPA1-205ENST00000558036 UROC1Q96N76 676 aa21.55■■□□□ 1.04
SNRPA1-205ENST00000558036 CRTAC1Q9NQ79 661 aa21.55■■□□□ 1.04
SNRPA1-205ENST00000558036 LRFN2Q9ULH4 789 aa21.55■■□□□ 1.04
SNRPA1-205ENST00000558036 USTQ9Y2C2 406 aa21.55■■□□□ 1.04
SNRPA1-205ENST00000558036 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.55■■□□□ 1.04
SNRPA1-205ENST00000558036 PROSCO94903 275 aa21.55■■□□□ 1.04
SNRPA1-205ENST00000558036 CLTBP09497 229 aa21.55■■□□□ 1.04
SNRPA1-205ENST00000558036 ODC1P11926 461 aa21.55■■□□□ 1.04
SNRPA1-205ENST00000558036 ITGB8P26012 769 aa21.55■■□□□ 1.04
SNRPA1-205ENST00000558036 RFC1P35251 1148 aaPredicted RBP21.55■■□□□ 1.04
SNRPA1-205ENST00000558036 PAFAH1B1P43034 410 aa21.55■■□□□ 1.04
SNRPA1-205ENST00000558036 DCLRE1AQ6PJP8 1040 aa21.55■■□□□ 1.04
SNRPA1-205ENST00000558036 FUKQ8N0W3 1084 aa21.55■■□□□ 1.04
SNRPA1-205ENST00000558036 TMEM86AQ8N2M4 240 aa21.55■■□□□ 1.04
SNRPA1-205ENST00000558036 EMC1Q8N766 993 aa21.55■■□□□ 1.04
SNRPA1-205ENST00000558036 SPATA4Q8NEY3 305 aa21.55■■□□□ 1.04
SNRPA1-205ENST00000558036 VWCEQ96DN2 955 aa21.55■■□□□ 1.04
SNRPA1-205ENST00000558036 SELENOOQ9BVL4 669 aa21.55■■□□□ 1.04
SNRPA1-205ENST00000558036 ELAC1Q9H777 363 aaKnown RBP21.55■■□□□ 1.04
SNRPA1-205ENST00000558036 KRT3P12035 628 aa21.54■■□□□ 1.04
SNRPA1-205ENST00000558036 GABRB2P47870 512 aa21.54■■□□□ 1.04
SNRPA1-205ENST00000558036 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.54■■□□□ 1.047e-6■□□□□ 8.4
SNRPA1-205ENST00000558036 ANKLE1Q8NAG6 615 aa21.54■■□□□ 1.04
SNRPA1-205ENST00000558036 ANKRD52Q8NB46 1076 aa21.54■■□□□ 1.04
SNRPA1-205ENST00000558036 PBKQ96KB5 322 aa21.54■■□□□ 1.04
SNRPA1-205ENST00000558036 CASD1Q96PB1 797 aa21.54■■□□□ 1.04
SNRPA1-205ENST00000558036 RTP3Q9BQQ7 232 aa21.54■■□□□ 1.04
SNRPA1-205ENST00000558036 PRDM5Q9NQX1 630 aaPredicted RBP21.54■■□□□ 1.04
SNRPA1-205ENST00000558036 METTL5Q9NRN9 209 aaKnown RBP21.54■■□□□ 1.04
SNRPA1-205ENST00000558036 TANC1Q9C0D5 1861 aa21.53■■□□□ 1.04
SNRPA1-205ENST00000558036 MYBPHLA2RUH7 354 aa21.53■■□□□ 1.04
SNRPA1-205ENST00000558036 GABBR2O75899 941 aa21.53■■□□□ 1.04
SNRPA1-205ENST00000558036 LHX1P48742 406 aa21.53■■□□□ 1.04
SNRPA1-205ENST00000558036 PEX5P50542 639 aa21.53■■□□□ 1.04
SNRPA1-205ENST00000558036 FAM183BPQ6ZVS7 135 aa21.53■■□□□ 1.04
SNRPA1-205ENST00000558036 CRIPAKQ8N1N5 446 aa21.53■■□□□ 1.04
SNRPA1-205ENST00000558036 MSANTD4Q8NCY6 345 aa21.53■■□□□ 1.04
SNRPA1-205ENST00000558036 IPO4Q8TEX9 1081 aaKnown RBP21.53■■□□□ 1.04
SNRPA1-205ENST00000558036 FAM193BQ96PV7 902 aaPredicted RBP21.53■■□□□ 1.04
SNRPA1-205ENST00000558036 SYT15Q9BQS2 421 aa21.53■■□□□ 1.04
SNRPA1-205ENST00000558036 KANSL3Q9P2N6 904 aa21.53■■□□□ 1.04
SNRPA1-205ENST00000558036 MIF4GDA9UHW6 222 aaKnown RBP21.53■■□□□ 1.04
SNRPA1-205ENST00000558036 UPP2O95045 317 aa21.53■■□□□ 1.04
SNRPA1-205ENST00000558036 RHOXF2BP0C7M4 288 aa21.53■■□□□ 1.04
SNRPA1-205ENST00000558036 CTNNA1P35221 906 aaKnown RBP21.53■■□□□ 1.04
SNRPA1-205ENST00000558036 FAM102AQ5T9C2 384 aaPredicted RBP21.53■■□□□ 1.04
SNRPA1-205ENST00000558036 PAQR9Q6ZVX9 377 aa21.53■■□□□ 1.04
SNRPA1-205ENST00000558036 SCUBE3Q8IX30 993 aa21.53■■□□□ 1.04
SNRPA1-205ENST00000558036 UBL4BQ8N7F7 174 aa21.53■■□□□ 1.04
SNRPA1-205ENST00000558036 RHOXF2Q9BQY4 288 aa21.53■■□□□ 1.04
SNRPA1-205ENST00000558036 B3GNT5Q9BYG0 378 aa21.53■■□□□ 1.04
SNRPA1-205ENST00000558036 RBM12Q9NTZ6 932 aaKnown RBP21.53■■□□□ 1.04
SNRPA1-205ENST00000558036 F8VP50 259 aa21.52■■□□□ 1.04
SNRPA1-205ENST00000558036 M0QZQ0 153 aa21.52■■□□□ 1.04
SNRPA1-205ENST00000558036 GRAP2O75791 330 aa21.52■■□□□ 1.04
SNRPA1-205ENST00000558036 TCF4P15884 667 aa21.52■■□□□ 1.04
SNRPA1-205ENST00000558036 RABGGTBP53611 331 aa21.52■■□□□ 1.04
SNRPA1-205ENST00000558036 BCAT1P54687 386 aa21.52■■□□□ 1.04
SNRPA1-205ENST00000558036 BCAR1P56945 870 aa21.52■■□□□ 1.04
SNRPA1-205ENST00000558036 MRPS25P82663 173 aaKnown RBP21.52■■□□□ 1.04
SNRPA1-205ENST00000558036 BST2Q10589 180 aaKnown RBP21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms