RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 ZNF394Q53GI3 561 aa27.2■■□□□ 1.94
SMAD6-202ENST00000557916 ELOVL4Q9GZR5 314 aa27.2■■□□□ 1.94
SMAD6-202ENST00000557916 UBE2TQ9NPD8 197 aaPredicted RBP27.2■■□□□ 1.94
SMAD6-202ENST00000557916 POU2F2P09086 479 aa27.19■■□□□ 1.94
SMAD6-202ENST00000557916 APBA1Q02410 837 aa27.19■■□□□ 1.94
SMAD6-202ENST00000557916 SMAD2Q15796 467 aaKnown RBP27.19■■□□□ 1.94
SMAD6-202ENST00000557916 FKBP15Q5T1M5 1219 aa27.19■■□□□ 1.94
SMAD6-202ENST00000557916 APTXQ7Z2E3 356 aaKnown RBP27.19■■□□□ 1.94
SMAD6-202ENST00000557916 UBR7Q8N806 425 aa27.19■■□□□ 1.94
SMAD6-202ENST00000557916 APEX2Q9UBZ4 518 aa27.19■■□□□ 1.94
SMAD6-202ENST00000557916 GOLGA6L19H0YKK7 550 aa27.18■■□□□ 1.94
SMAD6-202ENST00000557916 BDNFP23560 247 aa27.18■■□□□ 1.94
SMAD6-202ENST00000557916 KCNMA1Q12791 1236 aa27.18■■□□□ 1.94
SMAD6-202ENST00000557916 CBX2Q14781 532 aaPredicted RBP27.18■■□□□ 1.94
SMAD6-202ENST00000557916 ELMOD1Q8N336 334 aa27.18■■□□□ 1.94
SMAD6-202ENST00000557916 NECTIN4Q96NY8 510 aa27.18■■□□□ 1.94
SMAD6-202ENST00000557916 B3GNT5Q9BYG0 378 aa27.18■■□□□ 1.94
SMAD6-202ENST00000557916 LGALS16A8MUM7 142 aa27.17■■□□□ 1.94
SMAD6-202ENST00000557916 IL9P15248 144 aa27.17■■□□□ 1.94
SMAD6-202ENST00000557916 RAD23BP54727 409 aa27.17■■□□□ 1.94
SMAD6-202ENST00000557916 EPHB3P54753 998 aa27.17■■□□□ 1.94
SMAD6-202ENST00000557916 ZNF445P59923 1031 aa27.17■■□□□ 1.94
SMAD6-202ENST00000557916 GJB7Q6PEY0 223 aa27.17■■□□□ 1.94
SMAD6-202ENST00000557916 C12orf29Q8N999 325 aa27.17■■□□□ 1.94
SMAD6-202ENST00000557916 SLC4A11Q8NBS3 891 aa27.17■■□□□ 1.94
SMAD6-202ENST00000557916 TMEM176AQ96HP8 235 aa27.17■■□□□ 1.94
SMAD6-202ENST00000557916 ZNF512Q96ME7 567 aaPredicted RBP27.17■■□□□ 1.94
SMAD6-202ENST00000557916 KREMEN1Q96MU8 473 aa27.17■■□□□ 1.94
SMAD6-202ENST00000557916 SIX2Q9NPC8 291 aa27.17■■□□□ 1.94
SMAD6-202ENST00000557916 CEP72Q9P209 647 aa27.17■■□□□ 1.94
SMAD6-202ENST00000557916 PCDHB4Q9Y5E5 795 aa27.17■■□□□ 1.94
SMAD6-202ENST00000557916 CLDN5O00501 218 aa27.16■■□□□ 1.94
SMAD6-202ENST00000557916 ACO1P21399 889 aaKnown RBP27.16■■□□□ 1.94
SMAD6-202ENST00000557916 MAGEA11P43364 429 aa27.16■■□□□ 1.94
SMAD6-202ENST00000557916 MFAP3P55082 362 aa27.16■■□□□ 1.94
SMAD6-202ENST00000557916 ENOSF1Q7L5Y1 443 aa27.16■■□□□ 1.94
SMAD6-202ENST00000557916 GRASPQ7Z6J2 395 aaPredicted RBP27.16■■□□□ 1.94
SMAD6-202ENST00000557916 FAM81BQ96LP2 452 aa27.16■■□□□ 1.94
SMAD6-202ENST00000557916 HEXIM2Q96MH2 286 aaKnown RBP27.16■■□□□ 1.94
SMAD6-202ENST00000557916 MED10Q9BTT4 135 aa27.16■■□□□ 1.94
SMAD6-202ENST00000557916 ZNF518BQ9C0D4 1074 aa27.16■■□□□ 1.94
SMAD6-202ENST00000557916 FAM49BQ9NUQ9 324 aa27.16■■□□□ 1.94
SMAD6-202ENST00000557916 BMP1P13497 986 aa27.16■■□□□ 1.94
SMAD6-202ENST00000557916 PTPN2P17706 415 aa27.16■■□□□ 1.94
SMAD6-202ENST00000557916 ATF6P18850 670 aa27.16■■□□□ 1.94
SMAD6-202ENST00000557916 RPL10AP62906 217 aaKnown RBP27.16■■□□□ 1.94
SMAD6-202ENST00000557916 UBXN1Q04323 297 aa27.16■■□□□ 1.94
SMAD6-202ENST00000557916 IQCEQ6IPM2 695 aa27.16■■□□□ 1.94
SMAD6-202ENST00000557916 TMEM270Q6UE05 265 aa27.16■■□□□ 1.94
SMAD6-202ENST00000557916 VSTM1Q6UX27 236 aa27.16■■□□□ 1.94
SMAD6-202ENST00000557916 SCN4BQ8IWT1 228 aa27.16■■□□□ 1.94
SMAD6-202ENST00000557916 JAKMIP2Q96AA8 810 aa27.16■■□□□ 1.94
SMAD6-202ENST00000557916 LSM14BQ9BX40 385 aaKnown RBP27.16■■□□□ 1.94
SMAD6-202ENST00000557916 POMKQ9H5K3 350 aa27.16■■□□□ 1.94
SMAD6-202ENST00000557916 HCFC1R1Q9NWW0 138 aa27.16■■□□□ 1.94
SMAD6-202ENST00000557916 DNMT3BQ9UBC3 853 aaKnown RBP27.16■■□□□ 1.94
SMAD6-202ENST00000557916 ATP8B3O60423 1300 aa27.16■■□□□ 1.94
SMAD6-202ENST00000557916 CCDC130P13994 396 aa27.15■■□□□ 1.94
SMAD6-202ENST00000557916 GPR15P49685 360 aa27.15■■□□□ 1.94
SMAD6-202ENST00000557916 DDR2Q16832 855 aa27.15■■□□□ 1.94
SMAD6-202ENST00000557916 DPY19L2P1Q6NXN4 242 aa27.15■■□□□ 1.94
SMAD6-202ENST00000557916 FUKQ8N0W3 1084 aa27.15■■□□□ 1.94
SMAD6-202ENST00000557916 SLC2A14Q8TDB8 520 aa27.15■■□□□ 1.94
SMAD6-202ENST00000557916 GIPC2Q8TF65 315 aa27.15■■□□□ 1.94
SMAD6-202ENST00000557916 WDR6Q9NNW5 1121 aaKnown RBP27.15■■□□□ 1.94
SMAD6-202ENST00000557916 ASB3Q9Y575 518 aa27.15■■□□□ 1.94
SMAD6-202ENST00000557916 UNC80Q8N2C7 3258 aa27.14■■□□□ 1.94
SMAD6-202ENST00000557916 GRIK1P39086 918 aa27.14■■□□□ 1.93
SMAD6-202ENST00000557916 NTHL1P78549 312 aa27.14■■□□□ 1.93
SMAD6-202ENST00000557916 VEPH1Q14D04 833 aa27.14■■□□□ 1.93
SMAD6-202ENST00000557916 PAQR9Q6ZVX9 377 aa27.14■■□□□ 1.93
SMAD6-202ENST00000557916 ITIH5Q86UX2 942 aa27.14■■□□□ 1.93
SMAD6-202ENST00000557916 FAM35AQ86V20 835 aa27.14■■□□□ 1.93
SMAD6-202ENST00000557916 GPR152Q8TDT2 470 aa27.14■■□□□ 1.93
SMAD6-202ENST00000557916 CYFIP2Q96F07 1278 aa27.14■■□□□ 1.93
SMAD6-202ENST00000557916 CORO1BQ9BR76 489 aa27.14■■□□□ 1.93
SMAD6-202ENST00000557916 DNAJC12Q9UKB3 198 aa27.14■■□□□ 1.93
SMAD6-202ENST00000557916 CLUHO75153 1309 aa27.13■■□□□ 1.93
SMAD6-202ENST00000557916 ADORA2BP29275 332 aa27.13■■□□□ 1.93
SMAD6-202ENST00000557916 ARHGAP44Q17R89 818 aa27.13■■□□□ 1.93
SMAD6-202ENST00000557916 FILIP1LQ4L180 1135 aa27.13■■□□□ 1.93
SMAD6-202ENST00000557916 PABPC1LQ4VXU2 614 aaKnown RBP27.13■■□□□ 1.93
SMAD6-202ENST00000557916 TJAP1Q5JTD0 557 aa27.13■■□□□ 1.93
SMAD6-202ENST00000557916 KLHDC7AQ5VTJ3 777 aa27.13■■□□□ 1.93
SMAD6-202ENST00000557916 SDHAF4Q5VUM1 108 aa27.13■■□□□ 1.93
SMAD6-202ENST00000557916 PSMG2Q969U7 264 aa27.13■■□□□ 1.93
SMAD6-202ENST00000557916 HNRNPABQ99729 332 aaKnown RBP27.13■■□□□ 1.93
SMAD6-202ENST00000557916 SERPINC1P01008 464 aa27.12■■□□□ 1.93
SMAD6-202ENST00000557916 SYCP1Q15431 976 aa27.12■■□□□ 1.93
SMAD6-202ENST00000557916 TAF12Q16514 161 aa27.12■■□□□ 1.93
SMAD6-202ENST00000557916 DNAJB7Q7Z6W7 309 aaPredicted RBP27.12■■□□□ 1.93
SMAD6-202ENST00000557916 RBBP8NLQ8NC74 664 aaPredicted RBP27.12■■□□□ 1.93
SMAD6-202ENST00000557916 SMARCD1Q96GM5 515 aa27.12■■□□□ 1.93
SMAD6-202ENST00000557916 PHF7Q9BWX1 381 aaPredicted RBP27.12■■□□□ 1.93
SMAD6-202ENST00000557916 PLCB1Q9NQ66 1216 aa27.12■■□□□ 1.93
SMAD6-202ENST00000557916 RTN4Q9NQC3 1192 aaKnown RBP27.12■■□□□ 1.93
SMAD6-202ENST00000557916 C2orf16Q68DN1 1984 aa27.12■■□□□ 1.93
SMAD6-202ENST00000557916 RNF225M0QZC1 329 aaPredicted RBP27.11■■□□□ 1.93
SMAD6-202ENST00000557916 TRIM66O15016 1216 aa27.11■■□□□ 1.93
SMAD6-202ENST00000557916 RHOP08100 348 aa27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms