RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 H0Y858 1186 aa5.68□□□□□ -1.5
MTHFD1-216ENST00000557539 FSBPO95073 299 aa5.68□□□□□ -1.5
MTHFD1-216ENST00000557539 AMY1AP04745 511 aa5.68□□□□□ -1.5
MTHFD1-216ENST00000557539 DDCP20711 480 aa5.68□□□□□ -1.5
MTHFD1-216ENST00000557539 PRDX5P30044 214 aa5.68□□□□□ -1.5
MTHFD1-216ENST00000557539 SREBF1P36956 1147 aa5.68□□□□□ -1.5
MTHFD1-216ENST00000557539 EPS15P42566 896 aa5.68□□□□□ -1.5
MTHFD1-216ENST00000557539 MAPKAPK2P49137 400 aa5.68□□□□□ -1.5
MTHFD1-216ENST00000557539 ITGA8P53708 1063 aa5.68□□□□□ -1.5
MTHFD1-216ENST00000557539 HTRA4P83105 476 aaPredicted RBP5.68□□□□□ -1.5
MTHFD1-216ENST00000557539 WDR72Q3MJ13 1102 aa5.68□□□□□ -1.5
MTHFD1-216ENST00000557539 PLEKHN1Q494U1 663 aaPredicted RBP5.68□□□□□ -1.5
MTHFD1-216ENST00000557539 ADGRF1Q5T601 910 aa5.68□□□□□ -1.5
MTHFD1-216ENST00000557539 ZC3H14Q6PJT7 736 aaKnown RBP5.68□□□□□ -1.5
MTHFD1-216ENST00000557539 DPP8Q6V1X1 898 aaPredicted RBP5.68□□□□□ -1.5
MTHFD1-216ENST00000557539 OTOP2Q7RTS6 562 aa5.68□□□□□ -1.5
MTHFD1-216ENST00000557539 ZSWIM9Q86XI8 627 aa5.68□□□□□ -1.5
MTHFD1-216ENST00000557539 STPG3Q8N7X2 389 aa5.68□□□□□ -1.5
MTHFD1-216ENST00000557539 PDILTQ8N807 584 aa5.68□□□□□ -1.5
MTHFD1-216ENST00000557539 GIMAP8Q8ND71 665 aaPredicted RBP5.68□□□□□ -1.5
MTHFD1-216ENST00000557539 CYFIP2Q96F07 1278 aa5.68□□□□□ -1.5
MTHFD1-216ENST00000557539 WDR92Q96MX6 357 aa5.68□□□□□ -1.5
MTHFD1-216ENST00000557539 C1orf43Q9BWL3 253 aa5.68□□□□□ -1.5
MTHFD1-216ENST00000557539 MRPL46Q9H2W6 279 aaKnown RBP5.68□□□□□ -1.5
MTHFD1-216ENST00000557539 CNTD2Q9H8S5 307 aa5.68□□□□□ -1.5
MTHFD1-216ENST00000557539 SERHLQ9NQF3 203 aa5.68□□□□□ -1.5
MTHFD1-216ENST00000557539 TLR9Q9NR96 1032 aa5.68□□□□□ -1.5
MTHFD1-216ENST00000557539 PDP2Q9P2J9 529 aa5.68□□□□□ -1.5
MTHFD1-216ENST00000557539 ZFP69BQ9UJL9 534 aa5.68□□□□□ -1.5
MTHFD1-216ENST00000557539 FBXO2Q9UK22 296 aaPredicted RBP5.68□□□□□ -1.5
MTHFD1-216ENST00000557539 MAN2B2Q9Y2E5 1009 aa5.68□□□□□ -1.5
MTHFD1-216ENST00000557539 CRYL1Q9Y2S2 319 aa5.68□□□□□ -1.5
MTHFD1-216ENST00000557539 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.68□□□□□ -1.5
MTHFD1-216ENST00000557539 HELZ2Q9BYK8 2649 aaKnown RBP5.68□□□□□ -1.5
MTHFD1-216ENST00000557539 CCDC7Q96M83 1385 aa5.67□□□□□ -1.5
MTHFD1-216ENST00000557539 TCF20Q9UGU0 1960 aaKnown RBP5.67□□□□□ -1.5
MTHFD1-216ENST00000557539 SMG6Q86US8 1419 aaKnown RBP5.67□□□□□ -1.5
MTHFD1-216ENST00000557539 WDR87Q6ZQQ6 2873 aa5.67□□□□□ -1.5
MTHFD1-216ENST00000557539 RIF1Q5UIP0 2472 aaKnown RBP5.67□□□□□ -1.5
MTHFD1-216ENST00000557539 PRSS47A8MTI9 375 aa5.67□□□□□ -1.5
MTHFD1-216ENST00000557539 NT5C1B-RDH14C9J2C7 533 aa5.67□□□□□ -1.5
MTHFD1-216ENST00000557539 EYA2O00167 538 aa5.67□□□□□ -1.5
MTHFD1-216ENST00000557539 ACKR2O00590 384 aa5.67□□□□□ -1.5
MTHFD1-216ENST00000557539 NPC1O15118 1278 aa5.67□□□□□ -1.5
MTHFD1-216ENST00000557539 ARHGAP6O43182 974 aa5.67□□□□□ -1.5
MTHFD1-216ENST00000557539 SNX2O60749 519 aa5.67□□□□□ -1.5
MTHFD1-216ENST00000557539 MAFO75444 373 aaPredicted RBP5.67□□□□□ -1.5
MTHFD1-216ENST00000557539 RNASEH2AO75792 299 aaKnown RBP5.67□□□□□ -1.5
MTHFD1-216ENST00000557539 FARP2O94887 1054 aaPredicted RBP5.67□□□□□ -1.5
MTHFD1-216ENST00000557539 CNOT4O95628 575 aaKnown RBP5.67□□□□□ -1.5
MTHFD1-216ENST00000557539 FTH1P19P0C7X4 201 aa5.67□□□□□ -1.5
MTHFD1-216ENST00000557539 HDCP19113 662 aa5.67□□□□□ -1.5
MTHFD1-216ENST00000557539 GDNFP39905 211 aa5.67□□□□□ -1.5
MTHFD1-216ENST00000557539 KCNJ5P48544 419 aa5.67□□□□□ -1.5
MTHFD1-216ENST00000557539 FLT3LGP49771 235 aa5.67□□□□□ -1.5
MTHFD1-216ENST00000557539 ARL4CP56559 192 aa5.67□□□□□ -1.5
MTHFD1-216ENST00000557539 SOX8P57073 446 aa5.67□□□□□ -1.5
MTHFD1-216ENST00000557539 EXOSC9Q06265 439 aaKnown RBP5.67□□□□□ -1.5
MTHFD1-216ENST00000557539 INTS11Q5TA45 600 aaKnown RBP5.67□□□□□ -1.5
MTHFD1-216ENST00000557539 RFX8Q6ZV50 586 aa5.67□□□□□ -1.5
MTHFD1-216ENST00000557539 BEND5Q7L4P6 421 aa5.67□□□□□ -1.5
MTHFD1-216ENST00000557539 DGLUCYQ7Z3D6 616 aa5.67□□□□□ -1.5
MTHFD1-216ENST00000557539 GPC2Q8N158 579 aa5.67□□□□□ -1.5
MTHFD1-216ENST00000557539 FANCBQ8NB91 859 aa5.67□□□□□ -1.5
MTHFD1-216ENST00000557539 PIK3C3Q8NEB9 887 aa5.67□□□□□ -1.5
MTHFD1-216ENST00000557539 FBXO18Q8NFZ0 1043 aa5.67□□□□□ -1.5
MTHFD1-216ENST00000557539 OR6B3Q8NGW1 331 aa5.67□□□□□ -1.5
MTHFD1-216ENST00000557539 ZNF480Q8WV37 535 aa5.67□□□□□ -1.5
MTHFD1-216ENST00000557539 KBTBD7Q8WVZ9 684 aa5.67□□□□□ -1.5
MTHFD1-216ENST00000557539 STON2Q8WXE9 905 aa5.67□□□□□ -1.5
MTHFD1-216ENST00000557539 TNPO1Q92973 898 aaKnown RBP5.67□□□□□ -1.5
MTHFD1-216ENST00000557539 USP13Q92995 863 aaPredicted RBP5.67□□□□□ -1.5
MTHFD1-216ENST00000557539 NMD3Q96D46 503 aaKnown RBP5.67□□□□□ -1.5
MTHFD1-216ENST00000557539 SNX22Q96L94 193 aa5.67□□□□□ -1.5
MTHFD1-216ENST00000557539 TRIM54Q9BYV2 358 aa5.67□□□□□ -1.5
MTHFD1-216ENST00000557539 OSBPL6Q9BZF3 934 aa5.67□□□□□ -1.5
MTHFD1-216ENST00000557539 SENP6Q9GZR1 1112 aaPredicted RBP5.67□□□□□ -1.5
MTHFD1-216ENST00000557539 ADAM7Q9H2U9 754 aa5.67□□□□□ -1.5
MTHFD1-216ENST00000557539 SLAMF7Q9NQ25 335 aa5.67□□□□□ -1.5
MTHFD1-216ENST00000557539 VPS45Q9NRW7 570 aa5.67□□□□□ -1.5
MTHFD1-216ENST00000557539 LANCL2Q9NS86 450 aa5.67□□□□□ -1.5
MTHFD1-216ENST00000557539 SMC4Q9NTJ3 1288 aa5.67□□□□□ -1.5
MTHFD1-216ENST00000557539 AJAP1Q9UKB5 411 aaPredicted RBP5.67□□□□□ -1.5
MTHFD1-216ENST00000557539 GJD2Q9UKL4 321 aa5.67□□□□□ -1.5
MTHFD1-216ENST00000557539 PLA2G2DQ9UNK4 145 aa5.67□□□□□ -1.5
MTHFD1-216ENST00000557539 IFT172Q9UG01 1749 aa5.67□□□□□ -1.5
MTHFD1-216ENST00000557539 PI4K2BG5E9Z4 385 aa5.66□□□□□ -1.5
MTHFD1-216ENST00000557539 F2RL2O00254 374 aa5.66□□□□□ -1.5
MTHFD1-216ENST00000557539 BTN3A1O00481 513 aa5.66□□□□□ -1.5
MTHFD1-216ENST00000557539 PODXLO00592 558 aa5.66□□□□□ -1.5
MTHFD1-216ENST00000557539 TRIM38O00635 465 aa5.66□□□□□ -1.5
MTHFD1-216ENST00000557539 HNRNPDLO14979 420 aaKnown RBP5.66□□□□□ -1.5
MTHFD1-216ENST00000557539 IRAK2O43187 625 aa5.66□□□□□ -1.5
MTHFD1-216ENST00000557539 THAP12O43422 761 aa5.66□□□□□ -1.5
MTHFD1-216ENST00000557539 TBC1D4O60343 1298 aa5.66□□□□□ -1.5
MTHFD1-216ENST00000557539 GPR32O75388 356 aa5.66□□□□□ -1.5
MTHFD1-216ENST00000557539 MBD4O95243 580 aa5.66□□□□□ -1.5
MTHFD1-216ENST00000557539 ANXA2P07355 339 aaKnown RBP5.66□□□□□ -1.5
MTHFD1-216ENST00000557539 GAAP10253 952 aa5.66□□□□□ -1.5
MTHFD1-216ENST00000557539 MYL4P12829 197 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms