RNA–Protein interactions for RNA: ENST00000557466.1

VIPAS39-210, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-210ENST00000557466 CFAP221Q4G0U5 840 aa15.81■□□□□ 0.12
VIPAS39-210ENST00000557466 ZNF394Q53GI3 561 aa15.81■□□□□ 0.12
VIPAS39-210ENST00000557466 CES5AQ6NT32 575 aa15.81■□□□□ 0.12
VIPAS39-210ENST00000557466 DPY19L2P1Q6NXN4 242 aa15.81■□□□□ 0.12
VIPAS39-210ENST00000557466 C4orf50Q6ZRC1 276 aa15.81■□□□□ 0.12
VIPAS39-210ENST00000557466 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.81■□□□□ 0.12
VIPAS39-210ENST00000557466 CRYBG2Q8N1P7 616 aa15.81■□□□□ 0.12
VIPAS39-210ENST00000557466 TTC39CQ8N584 583 aa15.81■□□□□ 0.12
VIPAS39-210ENST00000557466 FUBP3Q96I24 572 aaKnown RBP eCLIP15.81■□□□□ 0.12
VIPAS39-210ENST00000557466 B3GNT5Q9BYG0 378 aa15.81■□□□□ 0.12
VIPAS39-210ENST00000557466 ZNF518BQ9C0D4 1074 aa15.81■□□□□ 0.12
VIPAS39-210ENST00000557466 FAM124BQ9H5Z6 455 aaPredicted RBP15.81■□□□□ 0.12
VIPAS39-210ENST00000557466 FAM49BQ9NUQ9 324 aa15.81■□□□□ 0.12
VIPAS39-210ENST00000557466 APEX2Q9UBZ4 518 aa15.81■□□□□ 0.12
VIPAS39-210ENST00000557466 AJAP1Q9UKB5 411 aaPredicted RBP15.81■□□□□ 0.12
VIPAS39-210ENST00000557466 UNC80Q8N2C7 3258 aa15.81■□□□□ 0.12
VIPAS39-210ENST00000557466 LRRC10BA6NIK2 292 aa15.8■□□□□ 0.12
VIPAS39-210ENST00000557466 CLDN5O00501 218 aa15.8■□□□□ 0.12
VIPAS39-210ENST00000557466 XYLBO75191 536 aa15.8■□□□□ 0.12
VIPAS39-210ENST00000557466 BDNFP23560 247 aa15.8■□□□□ 0.12
VIPAS39-210ENST00000557466 CYP2F1P24903 491 aa15.8■□□□□ 0.12
VIPAS39-210ENST00000557466 TPM4P67936 248 aa15.8■□□□□ 0.12
VIPAS39-210ENST00000557466 PLD1Q13393 1074 aa15.8■□□□□ 0.12
VIPAS39-210ENST00000557466 CBX2Q14781 532 aaPredicted RBP15.8■□□□□ 0.12
VIPAS39-210ENST00000557466 PUS10Q3MIT2 529 aaKnown RBP15.8■□□□□ 0.12
VIPAS39-210ENST00000557466 FKBP15Q5T1M5 1219 aa15.8■□□□□ 0.12
VIPAS39-210ENST00000557466 CYP26C1Q6V0L0 522 aa15.8■□□□□ 0.12
VIPAS39-210ENST00000557466 FAM35AQ86V20 835 aa15.8■□□□□ 0.12
VIPAS39-210ENST00000557466 C12orf29Q8N999 325 aa15.8■□□□□ 0.12
VIPAS39-210ENST00000557466 SLC4A11Q8NBS3 891 aa15.8■□□□□ 0.12
VIPAS39-210ENST00000557466 RIPOR3Q96MK2 946 aa15.8■□□□□ 0.12
VIPAS39-210ENST00000557466 ASB2Q96Q27 587 aa15.8■□□□□ 0.12
VIPAS39-210ENST00000557466 LSM14BQ9BX40 385 aaKnown RBP15.8■□□□□ 0.12
VIPAS39-210ENST00000557466 POMKQ9H5K3 350 aa15.8■□□□□ 0.12
VIPAS39-210ENST00000557466 PIDD1Q9HB75 910 aa15.8■□□□□ 0.12
VIPAS39-210ENST00000557466 UBE2TQ9NPD8 197 aaPredicted RBP15.8■□□□□ 0.12
VIPAS39-210ENST00000557466 HCFC1R1Q9NWW0 138 aa15.8■□□□□ 0.12
VIPAS39-210ENST00000557466 CEP72Q9P209 647 aa15.8■□□□□ 0.12
VIPAS39-210ENST00000557466 PCDHB4Q9Y5E5 795 aa15.8■□□□□ 0.12
VIPAS39-210ENST00000557466 DENND4CQ5VZ89 1909 aa15.8■□□□□ 0.12
VIPAS39-210ENST00000557466 ZNF638Q14966 1978 aaKnown RBP15.79■□□□□ 0.12
VIPAS39-210ENST00000557466 GOLGA6L19H0YKK7 550 aa15.79■□□□□ 0.12
VIPAS39-210ENST00000557466 MTHFRP42898 656 aa15.79■□□□□ 0.12
VIPAS39-210ENST00000557466 MAGEA11P43364 429 aa15.79■□□□□ 0.12
VIPAS39-210ENST00000557466 ALDH1A3P47895 512 aa15.79■□□□□ 0.12
VIPAS39-210ENST00000557466 TUFMP49411 452 aaKnown RBP15.79■□□□□ 0.12
VIPAS39-210ENST00000557466 KLK7P49862 253 aa15.79■□□□□ 0.12
VIPAS39-210ENST00000557466 CACNA2D1P54289 1103 aa15.79■□□□□ 0.12
VIPAS39-210ENST00000557466 NTHL1P78549 312 aa15.79■□□□□ 0.12
VIPAS39-210ENST00000557466 SMAD2Q15796 467 aaKnown RBP15.79■□□□□ 0.12
VIPAS39-210ENST00000557466 ATAT1Q5SQI0 421 aa15.79■□□□□ 0.12
VIPAS39-210ENST00000557466 SDHAF4Q5VUM1 108 aa15.79■□□□□ 0.12
VIPAS39-210ENST00000557466 TMEM270Q6UE05 265 aa15.79■□□□□ 0.12
VIPAS39-210ENST00000557466 PAQR9Q6ZVX9 377 aa15.79■□□□□ 0.12
VIPAS39-210ENST00000557466 GRASPQ7Z6J2 395 aaPredicted RBP15.79■□□□□ 0.12
VIPAS39-210ENST00000557466 SCN4BQ8IWT1 228 aa15.79■□□□□ 0.12
VIPAS39-210ENST00000557466 FUKQ8N0W3 1084 aa15.79■□□□□ 0.12
VIPAS39-210ENST00000557466 STKLD1Q8NE28 680 aa15.79■□□□□ 0.12
VIPAS39-210ENST00000557466 TMEM176AQ96HP8 235 aa15.79■□□□□ 0.12
VIPAS39-210ENST00000557466 MED10Q9BTT4 135 aa15.79■□□□□ 0.12
VIPAS39-210ENST00000557466 TMEM30AQ9NV96 361 aa15.79■□□□□ 0.12
VIPAS39-210ENST00000557466 DNMT3BQ9UBC3 853 aaKnown RBP15.79■□□□□ 0.12
VIPAS39-210ENST00000557466 SIK3Q9Y2K2 1263 aa15.79■□□□□ 0.12
VIPAS39-210ENST00000557466 MYO16Q9Y6X6 1858 aa15.79■□□□□ 0.12
VIPAS39-210ENST00000557466 DOCK8Q8NF50 2099 aa15.79■□□□□ 0.12
VIPAS39-210ENST00000557466 ATP8B3O60423 1300 aa15.78■□□□□ 0.12
VIPAS39-210ENST00000557466 CLUHO75153 1309 aa15.78■□□□□ 0.12
VIPAS39-210ENST00000557466 TRIM21P19474 475 aaKnown RBP15.78■□□□□ 0.12
VIPAS39-210ENST00000557466 ADORA2BP29275 332 aa15.78■□□□□ 0.12
VIPAS39-210ENST00000557466 EPHB3P54753 998 aa15.78■□□□□ 0.12
VIPAS39-210ENST00000557466 MFAP3P55082 362 aa15.78■□□□□ 0.12
VIPAS39-210ENST00000557466 UBXN1Q04323 297 aa15.78■□□□□ 0.12
VIPAS39-210ENST00000557466 SYCP1Q15431 976 aa15.78■□□□□ 0.12
VIPAS39-210ENST00000557466 DDR2Q16832 855 aa15.78■□□□□ 0.12
VIPAS39-210ENST00000557466 IQCEQ6IPM2 695 aa15.78■□□□□ 0.12
VIPAS39-210ENST00000557466 VSTM1Q6UX27 236 aa15.78■□□□□ 0.12
VIPAS39-210ENST00000557466 ENOSF1Q7L5Y1 443 aa15.78■□□□□ 0.12
VIPAS39-210ENST00000557466 RBBP8NLQ8NC74 664 aaPredicted RBP15.78■□□□□ 0.12
VIPAS39-210ENST00000557466 RNF214Q8ND24 703 aa15.78■□□□□ 0.12
VIPAS39-210ENST00000557466 SLC2A14Q8TDB8 520 aa15.78■□□□□ 0.12
VIPAS39-210ENST00000557466 GPR152Q8TDT2 470 aa15.78■□□□□ 0.12
VIPAS39-210ENST00000557466 GIPC2Q8TF65 315 aa15.78■□□□□ 0.12
VIPAS39-210ENST00000557466 NECTIN4Q96NY8 510 aa15.78■□□□□ 0.12
VIPAS39-210ENST00000557466 GANQ9H2C0 597 aa15.78■□□□□ 0.12
VIPAS39-210ENST00000557466 WDR6Q9NNW5 1121 aaKnown RBP15.78■□□□□ 0.12
VIPAS39-210ENST00000557466 KRT82Q9NSB4 513 aa15.78■□□□□ 0.12
VIPAS39-210ENST00000557466 DNAJC12Q9UKB3 198 aa15.78■□□□□ 0.12
VIPAS39-210ENST00000557466 FAM50BQ9Y247 325 aa15.78■□□□□ 0.12
VIPAS39-210ENST00000557466 FHOD1Q9Y613 1164 aa15.78■□□□□ 0.12
VIPAS39-210ENST00000557466 RNF225M0QZC1 329 aaPredicted RBP15.77■□□□□ 0.12
VIPAS39-210ENST00000557466 BMP1P13497 986 aa15.77■□□□□ 0.12
VIPAS39-210ENST00000557466 ZNF132P52740 706 aa15.77■□□□□ 0.12
VIPAS39-210ENST00000557466 RPL10AP62906 217 aaKnown RBP15.77■□□□□ 0.12
VIPAS39-210ENST00000557466 VEPH1Q14D04 833 aa15.77■□□□□ 0.12
VIPAS39-210ENST00000557466 ARHGAP44Q17R89 818 aa15.77■□□□□ 0.12
VIPAS39-210ENST00000557466 KLHDC7AQ5VTJ3 777 aa15.77■□□□□ 0.12
VIPAS39-210ENST00000557466 HS6ST3Q8IZP7 471 aa15.77■□□□□ 0.12
VIPAS39-210ENST00000557466 ELMOD1Q8N336 334 aa15.77■□□□□ 0.12
VIPAS39-210ENST00000557466 SHC3Q92529 594 aa15.77■□□□□ 0.12
VIPAS39-210ENST00000557466 JAKMIP2Q96AA8 810 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms