RNA–Protein interactions for RNA: ENST00000557394.5

SUPT16H-207, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 2,324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-207ENST00000557394 SMIM5Q71RC9 77 aa10.98□□□□□ -0.65
SUPT16H-207ENST00000557394 RASSF3Q86WH2 238 aa10.98□□□□□ -0.65
SUPT16H-207ENST00000557394 C4orf33Q8N1A6 199 aa10.98□□□□□ -0.65
SUPT16H-207ENST00000557394 NUP93Q8N1F7 819 aa10.98□□□□□ -0.65
SUPT16H-207ENST00000557394 ABTB1Q969K4 478 aaPredicted RBP10.98□□□□□ -0.65
SUPT16H-207ENST00000557394 ANKRD2Q9GZV1 360 aa10.98□□□□□ -0.65
SUPT16H-207ENST00000557394 INIPQ9NRY2 104 aa10.98□□□□□ -0.65
SUPT16H-207ENST00000557394 CHST7Q9NS84 486 aa10.98□□□□□ -0.65
SUPT16H-207ENST00000557394 FAIMQ9NVQ4 179 aa10.98□□□□□ -0.65
SUPT16H-207ENST00000557394 SEPT10Q9P0V9 454 aa10.98□□□□□ -0.65
SUPT16H-207ENST00000557394 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.98□□□□□ -0.65
SUPT16H-207ENST00000557394 EP400Q96L91 3159 aa10.98□□□□□ -0.65
SUPT16H-207ENST00000557394 CLDN3O15551 220 aa10.98□□□□□ -0.65
SUPT16H-207ENST00000557394 SUPT3HO75486 399 aa10.98□□□□□ -0.65
SUPT16H-207ENST00000557394 CIB2O75838 187 aa10.98□□□□□ -0.65
SUPT16H-207ENST00000557394 IL1BP01584 269 aa10.98□□□□□ -0.65
SUPT16H-207ENST00000557394 TFAP2AP05549 437 aa10.98□□□□□ -0.65
SUPT16H-207ENST00000557394 DLDP09622 509 aaKnown RBP10.98□□□□□ -0.65
SUPT16H-207ENST00000557394 VCLP18206 1134 aa10.98□□□□□ -0.65
SUPT16H-207ENST00000557394 PSMA3P25788 255 aa10.98□□□□□ -0.65
SUPT16H-207ENST00000557394 OXCT1P55809 520 aa10.98□□□□□ -0.65
SUPT16H-207ENST00000557394 EN1Q05925 392 aaPredicted RBP10.98□□□□□ -0.65
SUPT16H-207ENST00000557394 CNGA3Q16281 694 aa10.98□□□□□ -0.65
SUPT16H-207ENST00000557394 SFT2D3Q587I9 215 aa10.98□□□□□ -0.65
SUPT16H-207ENST00000557394 SH3D19Q5HYK7 790 aa10.98□□□□□ -0.65
SUPT16H-207ENST00000557394 MAP3K21Q5TCX8 1036 aa10.98□□□□□ -0.65
SUPT16H-207ENST00000557394 C6orf163Q5TEZ5 329 aa10.98□□□□□ -0.65
SUPT16H-207ENST00000557394 KAZNQ674X7 775 aa10.98□□□□□ -0.65
SUPT16H-207ENST00000557394 KLHDC10Q6PID8 442 aa10.98□□□□□ -0.65
SUPT16H-207ENST00000557394 C1orf228Q6PIY5 440 aa10.98□□□□□ -0.65
SUPT16H-207ENST00000557394 RBM44Q6ZP01 1051 aaKnown RBP10.98□□□□□ -0.65
SUPT16H-207ENST00000557394 TAS1R3Q7RTX0 852 aa10.98□□□□□ -0.65
SUPT16H-207ENST00000557394 ZCCHC9Q8N567 271 aaKnown RBP10.98□□□□□ -0.65
SUPT16H-207ENST00000557394 FNDC8Q8TC99 324 aa10.98□□□□□ -0.65
SUPT16H-207ENST00000557394 TTC1Q99614 292 aa10.98□□□□□ -0.65
SUPT16H-207ENST00000557394 BEGAINQ9BUH8 593 aa10.98□□□□□ -0.65
SUPT16H-207ENST00000557394 TMEM120AQ9BXJ8 343 aa10.98□□□□□ -0.65
SUPT16H-207ENST00000557394 DCLK3Q9C098 648 aa10.98□□□□□ -0.65
SUPT16H-207ENST00000557394 VPS11Q9H270 941 aa10.98□□□□□ -0.65
SUPT16H-207ENST00000557394 FBXO6Q9NRD1 293 aaPredicted RBP10.98□□□□□ -0.65
SUPT16H-207ENST00000557394 SRP68Q9UHB9 627 aaKnown RBP10.98□□□□□ -0.65
SUPT16H-207ENST00000557394 ITGB1BP2Q9UKP3 347 aa10.98□□□□□ -0.65
SUPT16H-207ENST00000557394 TELO2Q9Y4R8 837 aa10.98□□□□□ -0.65
SUPT16H-207ENST00000557394 A0A0G2JND7 137 aa10.97□□□□□ -0.65
SUPT16H-207ENST00000557394 CAPN14A8MX76 684 aa10.97□□□□□ -0.65
SUPT16H-207ENST00000557394 FCHO1O14526 889 aa10.97□□□□□ -0.65
SUPT16H-207ENST00000557394 LILRB3O75022 631 aa10.97□□□□□ -0.65
SUPT16H-207ENST00000557394 USP1O94782 785 aa10.97□□□□□ -0.65
SUPT16H-207ENST00000557394 KRT15P19012 456 aa10.97□□□□□ -0.65
SUPT16H-207ENST00000557394 ADCY8P40145 1251 aa10.97□□□□□ -0.65
SUPT16H-207ENST00000557394 FMO5P49326 533 aa10.97□□□□□ -0.65
SUPT16H-207ENST00000557394 GALK1P51570 392 aa10.97□□□□□ -0.65
SUPT16H-207ENST00000557394 OVGP1Q12889 678 aa10.97□□□□□ -0.65
SUPT16H-207ENST00000557394 PDK3Q15120 406 aa10.97□□□□□ -0.65
SUPT16H-207ENST00000557394 ANKRD20A4Q4UJ75 823 aa10.97□□□□□ -0.65
SUPT16H-207ENST00000557394 SLC44A4Q53GD3 710 aa10.97□□□□□ -0.65
SUPT16H-207ENST00000557394 PODNQ7Z5L7 613 aa10.97□□□□□ -0.65
SUPT16H-207ENST00000557394 DHDDSQ86SQ9 333 aa10.97□□□□□ -0.65
SUPT16H-207ENST00000557394 CPNE8Q86YQ8 564 aa10.97□□□□□ -0.65
SUPT16H-207ENST00000557394 PASD1Q8IV76 773 aa10.97□□□□□ -0.65
SUPT16H-207ENST00000557394 ULK2Q8IYT8 1036 aa10.97□□□□□ -0.65
SUPT16H-207ENST00000557394 FLAD1Q8NFF5 587 aa10.97□□□□□ -0.65
SUPT16H-207ENST00000557394 TNIP2Q8NFZ5 429 aa10.97□□□□□ -0.65
SUPT16H-207ENST00000557394 SPIRE2Q8WWL2 714 aa10.97□□□□□ -0.65
SUPT16H-207ENST00000557394 TMEM47Q9BQJ4 181 aa10.97□□□□□ -0.65
SUPT16H-207ENST00000557394 CORO1BQ9BR76 489 aa10.97□□□□□ -0.65
SUPT16H-207ENST00000557394 BRD8Q9H0E9 1235 aa10.97□□□□□ -0.65
SUPT16H-207ENST00000557394 PLK2Q9NYY3 685 aa10.97□□□□□ -0.65
SUPT16H-207ENST00000557394 APEX2Q9UBZ4 518 aa10.97□□□□□ -0.65
SUPT16H-207ENST00000557394 SLC7A8Q9UHI5 535 aa10.97□□□□□ -0.65
SUPT16H-207ENST00000557394 SLC24A2Q9UI40 661 aa10.97□□□□□ -0.65
SUPT16H-207ENST00000557394 POLIQ9UNA4 740 aa10.97□□□□□ -0.65
SUPT16H-207ENST00000557394 KIAA1024Q9UPX6 916 aa10.97□□□□□ -0.65
SUPT16H-207ENST00000557394 B2RBV5 119 aa10.97□□□□□ -0.65
SUPT16H-207ENST00000557394 WDR46O15213 610 aaKnown RBP10.97□□□□□ -0.65
SUPT16H-207ENST00000557394 TBC1D12O60347 775 aa10.97□□□□□ -0.65
SUPT16H-207ENST00000557394 BAG2O95816 211 aa10.97□□□□□ -0.65
SUPT16H-207ENST00000557394 BPNT1O95861 308 aa10.97□□□□□ -0.65
SUPT16H-207ENST00000557394 PORP16435 677 aaPredicted RBP10.97□□□□□ -0.65
SUPT16H-207ENST00000557394 GSTM4Q03013 218 aa10.97□□□□□ -0.65
SUPT16H-207ENST00000557394 ZBTB17Q13105 803 aa10.97□□□□□ -0.65
SUPT16H-207ENST00000557394 TRIP13Q15645 432 aaPredicted RBP10.97□□□□□ -0.65
SUPT16H-207ENST00000557394 NFIL3Q16649 462 aa10.97□□□□□ -0.65
SUPT16H-207ENST00000557394 BORAQ6PGQ7 559 aa10.97□□□□□ -0.65
SUPT16H-207ENST00000557394 C16orf54Q6UWD8 224 aa10.97□□□□□ -0.65
SUPT16H-207ENST00000557394 ZNF280CQ8ND82 737 aa10.97□□□□□ -0.65
SUPT16H-207ENST00000557394 SLC20A1Q8WUM9 679 aa10.97□□□□□ -0.65
SUPT16H-207ENST00000557394 NSUN4Q96CB9 384 aaKnown RBP10.97□□□□□ -0.65
SUPT16H-207ENST00000557394 OXNAD1Q96HP4 312 aaPredicted RBP10.97□□□□□ -0.65
SUPT16H-207ENST00000557394 BTBD9Q96Q07 612 aa10.97□□□□□ -0.65
SUPT16H-207ENST00000557394 PLVAPQ9BX97 442 aa10.97□□□□□ -0.65
SUPT16H-207ENST00000557394 S100A14Q9HCY8 104 aa10.97□□□□□ -0.65
SUPT16H-207ENST00000557394 FANCFQ9NPI8 374 aa10.97□□□□□ -0.65
SUPT16H-207ENST00000557394 SEPT11Q9NVA2 429 aaKnown RBP10.97□□□□□ -0.65
SUPT16H-207ENST00000557394 ZNF148Q9UQR1 794 aa10.97□□□□□ -0.65
SUPT16H-207ENST00000557394 SQORQ9Y6N5 450 aa10.97□□□□□ -0.65
SUPT16H-207ENST00000557394 A0A1W2PPM1 405 aa10.96□□□□□ -0.65
SUPT16H-207ENST00000557394 C2orf81A6NN90 581 aa10.96□□□□□ -0.65
SUPT16H-207ENST00000557394 E9PBE3 544 aa10.96□□□□□ -0.65
SUPT16H-207ENST00000557394 FOXN3O00409 490 aaPredicted RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms