RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 SOBPA7XYQ1 873 aa9.73□□□□□ -0.85
HNRNPC-227ENST00000556897 KPNA7A9QM74 516 aa9.73□□□□□ -0.85
HNRNPC-227ENST00000556897 TISP43B9A030 160 aa9.73□□□□□ -0.85
HNRNPC-227ENST00000556897 TULP1O00294 542 aaPredicted RBP9.73□□□□□ -0.85
HNRNPC-227ENST00000556897 CDX4O14627 284 aaPredicted RBP9.73□□□□□ -0.85
HNRNPC-227ENST00000556897 KHNYNO15037 678 aaKnown RBP9.73□□□□□ -0.85
HNRNPC-227ENST00000556897 PRPF40AO75400 957 aaKnown RBP9.73□□□□□ -0.85
HNRNPC-227ENST00000556897 TADA3O75528 432 aa9.73□□□□□ -0.85
HNRNPC-227ENST00000556897 CEACAM1P13688 526 aa9.73□□□□□ -0.85
HNRNPC-227ENST00000556897 IRX4P78413 519 aa9.73□□□□□ -0.85
HNRNPC-227ENST00000556897 ATP2C1P98194 919 aaPredicted RBP9.73□□□□□ -0.85
HNRNPC-227ENST00000556897 FAM160A1Q05DH4 1040 aa9.73□□□□□ -0.85
HNRNPC-227ENST00000556897 DHX8Q14562 1220 aaKnown RBP9.73□□□□□ -0.85
HNRNPC-227ENST00000556897 ZNF268Q14587 947 aaPredicted RBP9.73□□□□□ -0.85
HNRNPC-227ENST00000556897 DDR2Q16832 855 aa9.73□□□□□ -0.85
HNRNPC-227ENST00000556897 TMEM119Q4V9L6 283 aa9.73□□□□□ -0.85
HNRNPC-227ENST00000556897 PMS2CLQ68D20 193 aa9.73□□□□□ -0.85
HNRNPC-227ENST00000556897 ANO7Q6IWH7 933 aa9.73□□□□□ -0.85
HNRNPC-227ENST00000556897 GPBP1Q86WP2 473 aa9.73□□□□□ -0.85
HNRNPC-227ENST00000556897 DCP1BQ8IZD4 617 aaKnown RBP9.73□□□□□ -0.85
HNRNPC-227ENST00000556897 KCTD17Q8N5Z5 321 aa9.73□□□□□ -0.85
HNRNPC-227ENST00000556897 OSCP1Q8WVF1 389 aa9.73□□□□□ -0.85
HNRNPC-227ENST00000556897 SLC22A12Q96S37 553 aa9.73□□□□□ -0.85
HNRNPC-227ENST00000556897 TPSD1Q9BZJ3 242 aa9.73□□□□□ -0.85
HNRNPC-227ENST00000556897 CCSER1Q9C0I3 900 aa9.73□□□□□ -0.85
HNRNPC-227ENST00000556897 ZHX3Q9H4I2 956 aa9.73□□□□□ -0.85
HNRNPC-227ENST00000556897 ASB7Q9H672 318 aa9.73□□□□□ -0.85
HNRNPC-227ENST00000556897 TRPC7Q9HCX4 862 aa9.73□□□□□ -0.85
HNRNPC-227ENST00000556897 TMEM9BQ9NQ34 198 aa9.73□□□□□ -0.85
HNRNPC-227ENST00000556897 DPP3Q9NY33 737 aa9.73□□□□□ -0.85
HNRNPC-227ENST00000556897 ODF2LQ9ULJ1 636 aa9.73□□□□□ -0.85
HNRNPC-227ENST00000556897 C2CD2Q9Y426 696 aa9.73□□□□□ -0.85
HNRNPC-227ENST00000556897 GTF3C3Q9Y5Q9 886 aa9.73□□□□□ -0.85
HNRNPC-227ENST00000556897 THADAQ6YHU6 1953 aa9.72□□□□□ -0.85
HNRNPC-227ENST00000556897 ANTXRLA6NF34 631 aa9.72□□□□□ -0.85
HNRNPC-227ENST00000556897 ANKRD63C9JTQ0 380 aa9.72□□□□□ -0.85
HNRNPC-227ENST00000556897 TRAK2O60296 914 aa9.72□□□□□ -0.85
HNRNPC-227ENST00000556897 FAM13AO94988 1023 aa9.72□□□□□ -0.85
HNRNPC-227ENST00000556897 CKMP06732 381 aa9.72□□□□□ -0.85
HNRNPC-227ENST00000556897 CSH1P0DML2 217 aa9.72□□□□□ -0.85
HNRNPC-227ENST00000556897 CSH2P0DML3 217 aa9.72□□□□□ -0.85
HNRNPC-227ENST00000556897 CSRP1P21291 193 aaKnown RBP9.72□□□□□ -0.85
HNRNPC-227ENST00000556897 BCKDHBP21953 392 aa9.72□□□□□ -0.85
HNRNPC-227ENST00000556897 SCP2P22307 547 aa9.72□□□□□ -0.85
HNRNPC-227ENST00000556897 CYP2F1P24903 491 aa9.72□□□□□ -0.85
HNRNPC-227ENST00000556897 IFNAR2P48551 515 aa9.72□□□□□ -0.85
HNRNPC-227ENST00000556897 ZNF131P52739 623 aa9.72□□□□□ -0.85
HNRNPC-227ENST00000556897 SEC13P55735 322 aa9.72□□□□□ -0.85
HNRNPC-227ENST00000556897 TSPY1Q01534 308 aa9.72□□□□□ -0.85
HNRNPC-227ENST00000556897 ZNF77Q15935 545 aa9.72□□□□□ -0.85
HNRNPC-227ENST00000556897 NFE2Q16621 373 aaPredicted RBP9.72□□□□□ -0.85
HNRNPC-227ENST00000556897 EML3Q32P44 896 aa9.72□□□□□ -0.85
HNRNPC-227ENST00000556897 UAP1L1Q3KQV9 507 aa9.72□□□□□ -0.85
HNRNPC-227ENST00000556897 USP39Q53GS9 565 aaKnown RBP9.72□□□□□ -0.85
HNRNPC-227ENST00000556897 C2orf27AQ580R0 203 aa9.72□□□□□ -0.85
HNRNPC-227ENST00000556897 ADALQ6DHV7 355 aa9.72□□□□□ -0.85
HNRNPC-227ENST00000556897 KIAA1211LQ6NV74 962 aa9.72□□□□□ -0.85
HNRNPC-227ENST00000556897 CYP2U1Q7Z449 544 aa9.72□□□□□ -0.85
HNRNPC-227ENST00000556897 EFCAB13Q8IY85 973 aa9.72□□□□□ -0.85
HNRNPC-227ENST00000556897 LRRC15Q8TF66 581 aa9.72□□□□□ -0.85
HNRNPC-227ENST00000556897 ATP2A3Q93084 1043 aa9.72□□□□□ -0.85
HNRNPC-227ENST00000556897 SCNM1Q9BWG6 230 aa9.72□□□□□ -0.85
HNRNPC-227ENST00000556897 PARVGQ9HBI0 331 aa9.72□□□□□ -0.85
HNRNPC-227ENST00000556897 MYO16Q9Y6X6 1858 aa9.72□□□□□ -0.85
HNRNPC-227ENST00000556897 TCHHQ07283 1943 aa9.72□□□□□ -0.85
HNRNPC-227ENST00000556897 PCNX2A6NKB5 2137 aa9.71□□□□□ -0.85
HNRNPC-227ENST00000556897 ANKRD11Q6UB99 2663 aaPredicted RBP9.71□□□□□ -0.85
HNRNPC-227ENST00000556897 TRAV19A0A0A6YYK7 116 aa9.71□□□□□ -0.86
HNRNPC-227ENST00000556897 TMEM8BA6NDV4 472 aa9.71□□□□□ -0.86
HNRNPC-227ENST00000556897 SRRM3A6NNA2 597 aaPredicted RBP9.71□□□□□ -0.86
HNRNPC-227ENST00000556897 NOL4O94818 638 aa9.71□□□□□ -0.86
HNRNPC-227ENST00000556897 KRT18P05783 430 aaKnown RBP9.71□□□□□ -0.86
HNRNPC-227ENST00000556897 USP17L7P0C7H9 530 aa9.71□□□□□ -0.86
HNRNPC-227ENST00000556897 ACAT1P24752 427 aaKnown RBP9.71□□□□□ -0.86
HNRNPC-227ENST00000556897 DHPSP49366 369 aaPredicted RBP9.71□□□□□ -0.86
HNRNPC-227ENST00000556897 RPL10AP62906 217 aaKnown RBP9.71□□□□□ -0.86
HNRNPC-227ENST00000556897 GTF2BQ00403 316 aa9.71□□□□□ -0.86
HNRNPC-227ENST00000556897 USP4Q13107 963 aa9.71□□□□□ -0.86
HNRNPC-227ENST00000556897 CCDC142Q17RM4 750 aa9.71□□□□□ -0.86
HNRNPC-227ENST00000556897 SV2CQ496J9 727 aa9.71□□□□□ -0.86
HNRNPC-227ENST00000556897 ZC2HC1CQ53FD0 456 aaPredicted RBP9.71□□□□□ -0.86
HNRNPC-227ENST00000556897 RILPL1Q5EBL4 403 aa9.71□□□□□ -0.86
HNRNPC-227ENST00000556897 MCTP1Q6DN14 999 aa9.71□□□□□ -0.86
HNRNPC-227ENST00000556897 C11orf74Q86VG3 221 aa9.71□□□□□ -0.86
HNRNPC-227ENST00000556897 RASSF3Q86WH2 238 aa9.71□□□□□ -0.86
HNRNPC-227ENST00000556897 TTC30AQ86WT1 665 aa9.71□□□□□ -0.86
HNRNPC-227ENST00000556897 PDCL2Q8N4E4 241 aa9.71□□□□□ -0.86
HNRNPC-227ENST00000556897 CCDC33Q8N5R6 958 aa9.71□□□□□ -0.86
HNRNPC-227ENST00000556897 ARL14EPQ8N8R7 260 aaPredicted RBP9.71□□□□□ -0.86
HNRNPC-227ENST00000556897 DEFB124Q8NES8 71 aa9.71□□□□□ -0.86
HNRNPC-227ENST00000556897 MDGA1Q8NFP4 955 aa9.71□□□□□ -0.86
HNRNPC-227ENST00000556897 SH3RF2Q8TEC5 729 aa9.71□□□□□ -0.86
HNRNPC-227ENST00000556897 USP33Q8TEY7 942 aa9.71□□□□□ -0.86
HNRNPC-227ENST00000556897 ZCCHC14Q8WYQ9 949 aaKnown RBP9.71□□□□□ -0.86
HNRNPC-227ENST00000556897 PIGKQ92643 395 aa9.71□□□□□ -0.86
HNRNPC-227ENST00000556897 GATA6Q92908 595 aa9.71□□□□□ -0.86
HNRNPC-227ENST00000556897 TRMT2BQ96GJ1 504 aaKnown RBP9.71□□□□□ -0.86
HNRNPC-227ENST00000556897 CNOT6LQ96LI5 555 aaKnown RBP9.71□□□□□ -0.86
HNRNPC-227ENST00000556897 MYRFLQ96LU7 910 aa9.71□□□□□ -0.86
HNRNPC-227ENST00000556897 FIZ1Q96SL8 496 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms