RNA–Protein interactions for RNA: ENST00000556687.5

RBM23-222, Transcript of RNA binding motif protein 23, human

TSL 2

Gene RBM23, Length 1,124 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM23-222	ENST00000556687	SNX25	Q9H3E2	840 aa		13.09	□□□□□ -0.31
RBM23-222	ENST00000556687	DPEP3	Q9H4B8	488 aa		13.09	□□□□□ -0.31
RBM23-222	ENST00000556687	BRD9	Q9H8M2	597 aa		13.09	□□□□□ -0.31
RBM23-222	ENST00000556687	ABCB6	Q9NP58	842 aa		13.09	□□□□□ -0.31
RBM23-222	ENST00000556687	HEBP1	Q9NRV9	189 aa		13.09	□□□□□ -0.31
RBM23-222	ENST00000556687	FAM86C1	Q9NVL1	165 aa		13.09	□□□□□ -0.31
RBM23-222	ENST00000556687	MAGEC2	Q9UBF1	373 aa	Predicted RBP	13.09	□□□□□ -0.31
RBM23-222	ENST00000556687	MAGED2	Q9UNF1	606 aa	Predicted RBP	13.09	□□□□□ -0.31
RBM23-222	ENST00000556687	FRMD4B	Q9Y2L6	1034 aa		13.09	□□□□□ -0.31
RBM23-222	ENST00000556687	SIT1	Q9Y3P8	196 aa		13.09	□□□□□ -0.31
RBM23-222	ENST00000556687	MTF2	Q9Y483	593 aa	Predicted RBP	13.09	□□□□□ -0.31
RBM23-222	ENST00000556687	PTPRD	P23468	1912 aa		13.09	□□□□□ -0.31
RBM23-222	ENST00000556687	GREB1	Q4ZG55	1949 aa		13.09	□□□□□ -0.31
RBM23-222	ENST00000556687	ZNF638	Q14966	1978 aa	Known RBP	13.09	□□□□□ -0.31
RBM23-222	ENST00000556687	NUP210	Q8TEM1	1887 aa	Predicted RBP	13.08	□□□□□ -0.32
RBM23-222	ENST00000556687	TICRR	Q7Z2Z1	1910 aa		13.08	□□□□□ -0.32
RBM23-222	ENST00000556687	KANSL1L	A0AUZ9	987 aa		13.08	□□□□□ -0.32
RBM23-222	ENST00000556687	SHISA7	A6NL88	538 aa		13.08	□□□□□ -0.32
RBM23-222	ENST00000556687	SLC38A8	A6NNN8	435 aa		13.08	□□□□□ -0.32
RBM23-222	ENST00000556687	GADD45B	O75293	160 aa	Predicted RBP	13.08	□□□□□ -0.32
RBM23-222	ENST00000556687	PRAMEF12	O95522	483 aa		13.08	□□□□□ -0.32
RBM23-222	ENST00000556687	FAM163B	P0C2L3	166 aa		13.08	□□□□□ -0.32
RBM23-222	ENST00000556687	CSH1	P0DML2	217 aa		13.08	□□□□□ -0.32
RBM23-222	ENST00000556687	CSH2	P0DML3	217 aa		13.08	□□□□□ -0.32
RBM23-222	ENST00000556687	GLUL	P15104	373 aa		13.08	□□□□□ -0.32
RBM23-222	ENST00000556687	PTPN1	P18031	435 aa	Known RBP	13.08	□□□□□ -0.32
RBM23-222	ENST00000556687	BDNF	P23560	247 aa		13.08	□□□□□ -0.32
RBM23-222	ENST00000556687	CDC25C	P30307	473 aa		13.08	□□□□□ -0.32
RBM23-222	ENST00000556687	PRCP	P42785	496 aa		13.08	□□□□□ -0.32
RBM23-222	ENST00000556687	RAP1GAP	P47736	663 aa		13.08	□□□□□ -0.32
RBM23-222	ENST00000556687	VAMP7	P51809	220 aa		13.08	□□□□□ -0.32
RBM23-222	ENST00000556687	CYP27A1	Q02318	531 aa		13.08	□□□□□ -0.32
RBM23-222	ENST00000556687	PRKCQ	Q04759	706 aa		13.08	□□□□□ -0.32
RBM23-222	ENST00000556687	ADAM9	Q13443	819 aa		13.08	□□□□□ -0.32
RBM23-222	ENST00000556687	ZACN	Q401N2	412 aa		13.08	□□□□□ -0.32
RBM23-222	ENST00000556687	ZCWPW2	Q504Y3	356 aa		13.08	□□□□□ -0.32
RBM23-222	ENST00000556687	ARHGAP15	Q53QZ3	475 aa		13.08	□□□□□ -0.32
RBM23-222	ENST00000556687	MDH1B	Q5I0G3	518 aa		13.08	□□□□□ -0.32
RBM23-222	ENST00000556687	C4orf50	Q6ZRC1	276 aa		13.08	□□□□□ -0.32
RBM23-222	ENST00000556687	ALYREF	Q86V81	257 aa	Known RBP	13.08	□□□□□ -0.32
RBM23-222	ENST00000556687	CCDC105	Q8IYK2	499 aa		13.08	□□□□□ -0.32
RBM23-222	ENST00000556687	MYCBPAP	Q8TBZ2	947 aa		13.08	□□□□□ -0.32
RBM23-222	ENST00000556687	EEF2KMT	Q96G04	330 aa		13.08	□□□□□ -0.32
RBM23-222	ENST00000556687	CCDC34	Q96HJ3	373 aa		13.08	□□□□□ -0.32
RBM23-222	ENST00000556687	FUBP3	Q96I24	572 aa	Known RBP eCLIP	13.08	□□□□□ -0.32
RBM23-222	ENST00000556687	SHD	Q96IW2	340 aa		13.08	□□□□□ -0.32
RBM23-222	ENST00000556687	DDX23	Q9BUQ8	820 aa	Known RBP	13.08	□□□□□ -0.32
RBM23-222	ENST00000556687	SMG9	Q9H0W8	520 aa	Known RBP	13.08	□□□□□ -0.32
RBM23-222	ENST00000556687	SDCBP2	Q9H190	292 aa		13.08	□□□□□ -0.32
RBM23-222	ENST00000556687	TASP1	Q9H6P5	420 aa		13.08	□□□□□ -0.32
RBM23-222	ENST00000556687	SMYD3	Q9H7B4	428 aa		13.08	□□□□□ -0.32
RBM23-222	ENST00000556687	VRTN	Q9H8Y1	702 aa		13.08	□□□□□ -0.32
RBM23-222	ENST00000556687	DLGAP2	Q9P1A6	1054 aa		13.08	□□□□□ -0.32
RBM23-222	ENST00000556687	PCDHA5	Q9Y5H7	936 aa		13.08	□□□□□ -0.32
RBM23-222	ENST00000556687	MIA3	Q5JRA6	1907 aa		13.07	□□□□□ -0.32
RBM23-222	ENST00000556687		A8MXQ7	604 aa		13.07	□□□□□ -0.32
RBM23-222	ENST00000556687	IKBKB	O14920	756 aa		13.07	□□□□□ -0.32
RBM23-222	ENST00000556687	MAPK13	O15264	365 aa		13.07	□□□□□ -0.32
RBM23-222	ENST00000556687	NOL4	O94818	638 aa		13.07	□□□□□ -0.32
RBM23-222	ENST00000556687	CLSTN1	O94985	981 aa		13.07	□□□□□ -0.32
RBM23-222	ENST00000556687	TRIM49	P0CI25	452 aa		13.07	□□□□□ -0.32
RBM23-222	ENST00000556687	TRIM49C	P0CI26	452 aa		13.07	□□□□□ -0.32
RBM23-222	ENST00000556687	MAGEA11	P43364	429 aa		13.07	□□□□□ -0.32
RBM23-222	ENST00000556687	PPP3CA	Q08209	521 aa		13.07	□□□□□ -0.32
RBM23-222	ENST00000556687	UBXN2B	Q14CS0	331 aa		13.07	□□□□□ -0.32
RBM23-222	ENST00000556687	ZNF699	Q32M78	642 aa		13.07	□□□□□ -0.32
RBM23-222	ENST00000556687	ZNF667	Q5HYK9	610 aa		13.07	□□□□□ -0.32
RBM23-222	ENST00000556687	TXNDC8	Q6A555	127 aa		13.07	□□□□□ -0.32
RBM23-222	ENST00000556687	SPOPL	Q6IQ16	392 aa		13.07	□□□□□ -0.32
RBM23-222	ENST00000556687	SCARA5	Q6ZMJ2	495 aa		13.07	□□□□□ -0.32
RBM23-222	ENST00000556687	TPRG1	Q6ZUI0	275 aa		13.07	□□□□□ -0.32
RBM23-222	ENST00000556687	FAM186B	Q8IYM0	893 aa		13.07	□□□□□ -0.32
RBM23-222	ENST00000556687	MAB21L3	Q8N8X9	362 aa		13.07	□□□□□ -0.32
RBM23-222	ENST00000556687	PJA1	Q8NG27	643 aa		13.07	□□□□□ -0.32
RBM23-222	ENST00000556687	SPATA20	Q8TB22	786 aa		13.07	□□□□□ -0.32
RBM23-222	ENST00000556687	DEPDC1B	Q8WUY9	529 aa		13.07	□□□□□ -0.32
RBM23-222	ENST00000556687	ATOH1	Q92858	354 aa	Predicted RBP	13.07	□□□□□ -0.32
RBM23-222	ENST00000556687	DNASE1L2	Q92874	299 aa		13.07	□□□□□ -0.32
RBM23-222	ENST00000556687	IRF7	Q92985	503 aa		13.07	□□□□□ -0.32
RBM23-222	ENST00000556687	E2F7	Q96AV8	911 aa		13.07	□□□□□ -0.32
RBM23-222	ENST00000556687	PCED1B	Q96HM7	432 aa		13.07	□□□□□ -0.32
RBM23-222	ENST00000556687	TIGD1	Q96MW7	591 aa		13.07	□□□□□ -0.32
RBM23-222	ENST00000556687	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	13.07	□□□□□ -0.32
RBM23-222	ENST00000556687	ANAPC1	Q9H1A4	1944 aa		13.07	□□□□□ -0.32
RBM23-222	ENST00000556687	COL4A2	P08572	1712 aa		13.07	□□□□□ -0.32
RBM23-222	ENST00000556687	F5	P12259	2224 aa		13.07	□□□□□ -0.32
RBM23-222	ENST00000556687	FAM170B	A6NMN3	283 aa		13.06	□□□□□ -0.32
RBM23-222	ENST00000556687	ARNTL	O00327	626 aa		13.06	□□□□□ -0.32
RBM23-222	ENST00000556687	CLDN5	O00501	218 aa		13.06	□□□□□ -0.32
RBM23-222	ENST00000556687	ZNF263	O14978	683 aa		13.06	□□□□□ -0.32
RBM23-222	ENST00000556687	TADA3	O75528	432 aa		13.06	□□□□□ -0.32
RBM23-222	ENST00000556687	HLA-DRA	P01903	254 aa		13.06	□□□□□ -0.32
RBM23-222	ENST00000556687	RPL13	P26373	211 aa	Known RBP	13.06	□□□□□ -0.32
RBM23-222	ENST00000556687	PSMC2	P35998	433 aa	Known RBP	13.06	□□□□□ -0.32
RBM23-222	ENST00000556687	GRIK1	P39086	918 aa		13.06	□□□□□ -0.32
RBM23-222	ENST00000556687	GCLM	P48507	274 aa		13.06	□□□□□ -0.32
RBM23-222	ENST00000556687	CACNA2D1	P54289	1103 aa		13.06	□□□□□ -0.32
RBM23-222	ENST00000556687	FCHO2	Q0JRZ9	810 aa		13.06	□□□□□ -0.32
RBM23-222	ENST00000556687	MAPRE1	Q15691	268 aa	Known RBP	13.06	□□□□□ -0.32
RBM23-222	ENST00000556687	SGSM1	Q2NKQ1	1148 aa		13.06	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms