RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 CD48P09326 243 aa10.67□□□□□ -0.7
TMEM260-211ENST00000556648 GPD2P43304 727 aa10.67□□□□□ -0.7
TMEM260-211ENST00000556648 DYNLT1P63172 113 aa10.67□□□□□ -0.7
TMEM260-211ENST00000556648 BEX3Q00994 111 aa10.67□□□□□ -0.7
TMEM260-211ENST00000556648 INCA1Q0VD86 236 aa10.67□□□□□ -0.7
TMEM260-211ENST00000556648 GOLGA7BQ2TAP0 167 aa10.67□□□□□ -0.7
TMEM260-211ENST00000556648 SH3PXD2AQ5TCZ1 1133 aa10.67□□□□□ -0.7
TMEM260-211ENST00000556648 LRRC38Q5VT99 294 aa10.67□□□□□ -0.7
TMEM260-211ENST00000556648 CHADLQ6NUI6 762 aa10.67□□□□□ -0.7
TMEM260-211ENST00000556648 SYDE1Q6ZW31 735 aaPredicted RBP10.67□□□□□ -0.7
TMEM260-211ENST00000556648 CATSPER4Q7RTX7 472 aa10.67□□□□□ -0.7
TMEM260-211ENST00000556648 HOOK3Q86VS8 718 aa10.67□□□□□ -0.7
TMEM260-211ENST00000556648 C12orf29Q8N999 325 aa10.67□□□□□ -0.7
TMEM260-211ENST00000556648 MDM1Q8TC05 714 aa10.67□□□□□ -0.7
TMEM260-211ENST00000556648 TMEM40Q8WWA1 233 aa10.67□□□□□ -0.7
TMEM260-211ENST00000556648 SNX27Q96L92 541 aa10.67□□□□□ -0.7
TMEM260-211ENST00000556648 PEBP4Q96S96 227 aa10.67□□□□□ -0.7
TMEM260-211ENST00000556648 ADPGKQ9BRR6 497 aa10.67□□□□□ -0.7
TMEM260-211ENST00000556648 CYP3A43Q9HB55 503 aa10.67□□□□□ -0.7
TMEM260-211ENST00000556648 SAE1Q9UBE0 346 aaPredicted RBP10.67□□□□□ -0.7
TMEM260-211ENST00000556648 PCSK1NQ9UHG2 260 aa10.67□□□□□ -0.7
TMEM260-211ENST00000556648 ANAPC5Q9UJX4 755 aa10.67□□□□□ -0.7
TMEM260-211ENST00000556648 STRIP2Q9ULQ0 834 aa10.67□□□□□ -0.7
TMEM260-211ENST00000556648 C2CD2Q9Y426 696 aa10.67□□□□□ -0.7
TMEM260-211ENST00000556648 FOXO6A8MYZ6 492 aa10.67□□□□□ -0.7
TMEM260-211ENST00000556648 ZNF865P0CJ78 1059 aaPredicted RBP10.67□□□□□ -0.7
TMEM260-211ENST00000556648 VDRP11473 427 aa10.67□□□□□ -0.7
TMEM260-211ENST00000556648 CYP2C9P11712 490 aa10.67□□□□□ -0.7
TMEM260-211ENST00000556648 ITIH2P19823 946 aa10.67□□□□□ -0.7
TMEM260-211ENST00000556648 AKAP5P24588 427 aa10.67□□□□□ -0.7
TMEM260-211ENST00000556648 RGS7P49802 495 aa10.67□□□□□ -0.7
TMEM260-211ENST00000556648 MFSD10Q14728 455 aa10.67□□□□□ -0.7
TMEM260-211ENST00000556648 SLMAPQ14BN4 828 aa10.67□□□□□ -0.7
TMEM260-211ENST00000556648 P3H1Q32P28 736 aa10.67□□□□□ -0.7
TMEM260-211ENST00000556648 CCDC38Q502W7 563 aa10.67□□□□□ -0.7
TMEM260-211ENST00000556648 ODF2Q5BJF6 829 aa10.67□□□□□ -0.7
TMEM260-211ENST00000556648 FAM183BPQ6ZVS7 135 aa10.67□□□□□ -0.7
TMEM260-211ENST00000556648 ZNF365Q70YC5 407 aa10.67□□□□□ -0.7
TMEM260-211ENST00000556648 GSTA5Q7RTV2 222 aa10.67□□□□□ -0.7
TMEM260-211ENST00000556648 DNAJB3Q8WWF6 145 aa10.67□□□□□ -0.7
TMEM260-211ENST00000556648 MCRS1Q96EZ8 462 aa10.67□□□□□ -0.7
TMEM260-211ENST00000556648 CWC15Q9P013 229 aaKnown RBP10.67□□□□□ -0.7
TMEM260-211ENST00000556648 BARX2Q9UMQ3 279 aaPredicted RBP10.67□□□□□ -0.7
TMEM260-211ENST00000556648 TRIP12Q14669 1992 aaPredicted RBP10.66□□□□□ -0.7
TMEM260-211ENST00000556648 PDCD11Q14690 1871 aaKnown RBP10.66□□□□□ -0.7
TMEM260-211ENST00000556648 A6NJR5 290 aa10.66□□□□□ -0.7
TMEM260-211ENST00000556648 E5RJQ4 531 aa10.66□□□□□ -0.7
TMEM260-211ENST00000556648 GRAP2O75791 330 aa10.66□□□□□ -0.7
TMEM260-211ENST00000556648 PTPN7P35236 360 aa10.66□□□□□ -0.7
TMEM260-211ENST00000556648 GSCP56915 257 aaPredicted RBP10.66□□□□□ -0.7
TMEM260-211ENST00000556648 MAP2K5Q13163 448 aa10.66□□□□□ -0.7
TMEM260-211ENST00000556648 CNGA2Q16280 664 aa10.66□□□□□ -0.7
TMEM260-211ENST00000556648 KYAT1Q16773 422 aa10.66□□□□□ -0.7
TMEM260-211ENST00000556648 LONRF1Q17RB8 773 aa10.66□□□□□ -0.7
TMEM260-211ENST00000556648 DCAF4L1Q3SXM0 396 aa10.66□□□□□ -0.7
TMEM260-211ENST00000556648 TFDP3Q5H9I0 405 aa10.66□□□□□ -0.7
TMEM260-211ENST00000556648 FAM182AQ5T1J6 154 aa10.66□□□□□ -0.7
TMEM260-211ENST00000556648 FAM102AQ5T9C2 384 aaPredicted RBP10.66□□□□□ -0.7
TMEM260-211ENST00000556648 GCOM2Q9BZD3 368 aaPredicted RBP10.66□□□□□ -0.7
TMEM260-211ENST00000556648 ADAM7Q9H2U9 754 aa10.66□□□□□ -0.7
TMEM260-211ENST00000556648 FAM49BQ9NUQ9 324 aa10.66□□□□□ -0.7
TMEM260-211ENST00000556648 SLC5A4Q9NY91 659 aa10.66□□□□□ -0.7
TMEM260-211ENST00000556648 NINJ2Q9NZG7 142 aa10.66□□□□□ -0.7
TMEM260-211ENST00000556648 KLK14Q9P0G3 267 aa10.66□□□□□ -0.7
TMEM260-211ENST00000556648 CTNNAL1Q9UBT7 734 aa10.66□□□□□ -0.7
TMEM260-211ENST00000556648 TSPAN16Q9UKR8 245 aa10.66□□□□□ -0.7
TMEM260-211ENST00000556648 MBLAC1A4D2B0 266 aaPredicted RBP10.65□□□□□ -0.7
TMEM260-211ENST00000556648 RRN3P2A6NIE6 340 aa10.65□□□□□ -0.7
TMEM260-211ENST00000556648 RGS16O15492 202 aaPredicted RBP10.65□□□□□ -0.7
TMEM260-211ENST00000556648 TREHO43280 583 aa10.65□□□□□ -0.7
TMEM260-211ENST00000556648 GABBR2O75899 941 aa10.65□□□□□ -0.7
TMEM260-211ENST00000556648 RECQL4O94761 1208 aa10.65□□□□□ -0.7
TMEM260-211ENST00000556648 TJP3O95049 919 aa10.65□□□□□ -0.7
TMEM260-211ENST00000556648 MYL3P08590 195 aa10.65□□□□□ -0.7
TMEM260-211ENST00000556648 P4HA1P13674 534 aa10.65□□□□□ -0.7
TMEM260-211ENST00000556648 DARSP14868 501 aaKnown RBP10.65□□□□□ -0.7
TMEM260-211ENST00000556648 GABRB2P47870 512 aa10.65□□□□□ -0.7
TMEM260-211ENST00000556648 PSEN2P49810 448 aa10.65□□□□□ -0.7
TMEM260-211ENST00000556648 AUHQ13825 339 aaKnown RBP10.65□□□□□ -0.7
TMEM260-211ENST00000556648 BYSLQ13895 437 aaKnown RBP10.65□□□□□ -0.7
TMEM260-211ENST00000556648 ZNF268Q14587 947 aaPredicted RBP10.65□□□□□ -0.7
TMEM260-211ENST00000556648 OASLQ15646 514 aaKnown RBP10.65□□□□□ -0.7
TMEM260-211ENST00000556648 C15orf59Q2T9L4 293 aaPredicted RBP10.65□□□□□ -0.7
TMEM260-211ENST00000556648 PPP1R26Q5T8A7 1209 aaPredicted RBP10.65□□□□□ -0.7
TMEM260-211ENST00000556648 HIBCHQ6NVY1 386 aaPredicted RBP10.65□□□□□ -0.7
TMEM260-211ENST00000556648 SLC27A1Q6PCB7 646 aa10.65□□□□□ -0.7
TMEM260-211ENST00000556648 B4GALNT4Q76KP1 1039 aa10.65□□□□□ -0.7
TMEM260-211ENST00000556648 ACOT1Q86TX2 421 aa10.65□□□□□ -0.7
TMEM260-211ENST00000556648 TTC30AQ86WT1 665 aa10.65□□□□□ -0.7
TMEM260-211ENST00000556648 RASAL3Q86YV0 1011 aa10.65□□□□□ -0.7
TMEM260-211ENST00000556648 ALLCQ8N6M5 410 aa10.65□□□□□ -0.7
TMEM260-211ENST00000556648 HSPH1Q92598 858 aa10.65□□□□□ -0.7
TMEM260-211ENST00000556648 FAXDC2Q96IV6 333 aa10.65□□□□□ -0.7
TMEM260-211ENST00000556648 SELENOSQ9BQE4 189 aa10.65□□□□□ -0.7
TMEM260-211ENST00000556648 TMEM121Q9BTD3 319 aa10.65□□□□□ -0.7
TMEM260-211ENST00000556648 TRAIPQ9BWF2 469 aa10.65□□□□□ -0.7
TMEM260-211ENST00000556648 FAM129AQ9BZQ8 928 aa10.65□□□□□ -0.7
TMEM260-211ENST00000556648 FAM107BQ9H098 131 aa10.65□□□□□ -0.7
TMEM260-211ENST00000556648 EPN3Q9H201 632 aa10.65□□□□□ -0.7
TMEM260-211ENST00000556648 DPEP3Q9H4B8 488 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms