RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 hCG_2014768A0A024R1R8 64 aa6.38□□□□□ -1.39
PRPF39-209ENST00000556353 LINC01548A6NM66 108 aa6.38□□□□□ -1.39
PRPF39-209ENST00000556353 TARM1B6A8C7 271 aa6.38□□□□□ -1.39
PRPF39-209ENST00000556353 SLC16A3O15427 465 aaKnown RBP6.38□□□□□ -1.39
PRPF39-209ENST00000556353 ALDH1L1O75891 902 aa6.38□□□□□ -1.39
PRPF39-209ENST00000556353 GRPP07492 148 aa6.38□□□□□ -1.39
PRPF39-209ENST00000556353 JUPP14923 745 aa6.38□□□□□ -1.39
PRPF39-209ENST00000556353 ANAPC15P60006 121 aa6.38□□□□□ -1.39
PRPF39-209ENST00000556353 ARHGAP40Q5TG30 622 aa6.38□□□□□ -1.39
PRPF39-209ENST00000556353 ANKRD16Q6P6B7 361 aa6.38□□□□□ -1.39
PRPF39-209ENST00000556353 SLC29A4Q7RTT9 530 aa6.38□□□□□ -1.39
PRPF39-209ENST00000556353 SEMA6DQ8NFY4 1073 aa6.38□□□□□ -1.39
PRPF39-209ENST00000556353 PTDSS2Q9BVG9 487 aa6.38□□□□□ -1.39
PRPF39-209ENST00000556353 SLC29A3Q9BZD2 475 aa6.38□□□□□ -1.39
PRPF39-209ENST00000556353 ARMT1Q9H993 441 aa6.38□□□□□ -1.39
PRPF39-209ENST00000556353 SERTAD3Q9UJW9 196 aa6.38□□□□□ -1.39
PRPF39-209ENST00000556353 FNDC1Q4ZHG4 1894 aaPredicted RBP6.37□□□□□ -1.39
PRPF39-209ENST00000556353 AQRO60306 1485 aaKnown RBP eCLIP6.37□□□□□ -1.392e-6■■■■□ 20.5
PRPF39-209ENST00000556353 RAD54L2Q9Y4B4 1467 aa6.37□□□□□ -1.39
PRPF39-209ENST00000556353 ONECUT2O95948 504 aa6.37□□□□□ -1.39
PRPF39-209ENST00000556353 CELA2AP08217 269 aa6.37□□□□□ -1.39
PRPF39-209ENST00000556353 PPIFP30405 207 aaKnown RBP6.37□□□□□ -1.39
PRPF39-209ENST00000556353 LILRA4P59901 499 aa6.37□□□□□ -1.39
PRPF39-209ENST00000556353 GRM1Q13255 1194 aa6.37□□□□□ -1.39
PRPF39-209ENST00000556353 LLGL1Q15334 1064 aa6.37□□□□□ -1.39
PRPF39-209ENST00000556353 TMEM119Q4V9L6 283 aa6.37□□□□□ -1.39
PRPF39-209ENST00000556353 MAVSQ7Z434 540 aa6.37□□□□□ -1.39
PRPF39-209ENST00000556353 ZNF804AQ7Z570 1209 aa6.37□□□□□ -1.39
PRPF39-209ENST00000556353 CELF5Q8N6W0 485 aaKnown RBP6.37□□□□□ -1.39
PRPF39-209ENST00000556353 TBC1D5Q92609 795 aa6.37□□□□□ -1.39
PRPF39-209ENST00000556353 KRTAP9-8Q9BYQ0 159 aa6.37□□□□□ -1.39
PRPF39-209ENST00000556353 FLRT1Q9NZU1 646 aa6.37□□□□□ -1.39
PRPF39-209ENST00000556353 SERGEFQ9UGK8 458 aa6.37□□□□□ -1.39
PRPF39-209ENST00000556353 CPA4Q9UI42 421 aa6.37□□□□□ -1.39
PRPF39-209ENST00000556353 SH2B3Q9UQQ2 575 aa6.37□□□□□ -1.39
PRPF39-209ENST00000556353 ABCC8Q09428 1581 aa6.36□□□□□ -1.39
PRPF39-209ENST00000556353 COL3A1P02461 1466 aaPredicted RBP6.36□□□□□ -1.39
PRPF39-209ENST00000556353 FGD5Q6ZNL6 1462 aa6.36□□□□□ -1.39
PRPF39-209ENST00000556353 QSOX1O00391 747 aa6.36□□□□□ -1.39
PRPF39-209ENST00000556353 JTBO76095 146 aa6.36□□□□□ -1.39
PRPF39-209ENST00000556353 IL6RP08887 468 aaPredicted RBP6.36□□□□□ -1.39
PRPF39-209ENST00000556353 CYP2C18P33260 490 aa6.36□□□□□ -1.39
PRPF39-209ENST00000556353 VIPR2P41587 438 aa6.36□□□□□ -1.39
PRPF39-209ENST00000556353 CLCN2P51788 898 aa6.36□□□□□ -1.39
PRPF39-209ENST00000556353 EEFSECP57772 596 aaKnown RBP6.36□□□□□ -1.39
PRPF39-209ENST00000556353 SATB1Q01826 763 aa6.36□□□□□ -1.39
PRPF39-209ENST00000556353 TFF2Q03403 129 aa6.36□□□□□ -1.39
PRPF39-209ENST00000556353 ZNF267Q14586 743 aaPredicted RBP6.36□□□□□ -1.39
PRPF39-209ENST00000556353 SRSF7Q16629 238 aaKnown RBP eCLIP6.36□□□□□ -1.39
PRPF39-209ENST00000556353 AARS2Q5JTZ9 985 aaKnown RBP6.36□□□□□ -1.39
PRPF39-209ENST00000556353 TREML2Q5T2D2 321 aa6.36□□□□□ -1.39
PRPF39-209ENST00000556353 WDR53Q7Z5U6 358 aaPredicted RBP6.36□□□□□ -1.39
PRPF39-209ENST00000556353 FANCBQ8NB91 859 aa6.36□□□□□ -1.39
PRPF39-209ENST00000556353 PLBD2Q8NHP8 589 aa6.36□□□□□ -1.39
PRPF39-209ENST00000556353 SMG7Q92540 1137 aaKnown RBP6.36□□□□□ -1.39
PRPF39-209ENST00000556353 SLC12A5Q9H2X9 1139 aa6.36□□□□□ -1.39
PRPF39-209ENST00000556353 SH3BP4Q9P0V3 963 aa6.36□□□□□ -1.39
PRPF39-209ENST00000556353 PNMA8BQ9ULN7 279 aaPredicted RBP6.36□□□□□ -1.39
PRPF39-209ENST00000556353 SHOC2Q9UQ13 582 aa6.36□□□□□ -1.39
PRPF39-209ENST00000556353 SSX2IPQ9Y2D8 614 aa6.36□□□□□ -1.39
PRPF39-209ENST00000556353 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.36□□□□□ -1.39
PRPF39-209ENST00000556353 CLASP1Q7Z460 1538 aa6.35□□□□□ -1.39
PRPF39-209ENST00000556353 E2F8A0AVK6 867 aa6.35□□□□□ -1.39
PRPF39-209ENST00000556353 H0YIZ8 118 aa6.35□□□□□ -1.39
PRPF39-209ENST00000556353 AP1G1O43747 822 aa6.35□□□□□ -1.39
PRPF39-209ENST00000556353 LIPAP38571 399 aa6.35□□□□□ -1.39
PRPF39-209ENST00000556353 PIN1Q13526 163 aaPredicted RBP6.35□□□□□ -1.39
PRPF39-209ENST00000556353 E2F2Q14209 437 aa6.35□□□□□ -1.39
PRPF39-209ENST00000556353 FGL2Q14314 439 aa6.35□□□□□ -1.39
PRPF39-209ENST00000556353 TTF1Q15361 905 aaPredicted RBP6.35□□□□□ -1.39
PRPF39-209ENST00000556353 EZH2Q15910 746 aaKnown RBP6.35□□□□□ -1.39
PRPF39-209ENST00000556353 RGS7BPQ6MZT1 257 aaPredicted RBP6.35□□□□□ -1.39
PRPF39-209ENST00000556353 LRRC71Q8N4P6 559 aa6.35□□□□□ -1.39
PRPF39-209ENST00000556353 DIS3LQ8TF46 1054 aaKnown RBP6.35□□□□□ -1.39
PRPF39-209ENST00000556353 ATG4AQ8WYN0 398 aa6.35□□□□□ -1.39
PRPF39-209ENST00000556353 RHOBTB2Q9BYZ6 727 aa6.35□□□□□ -1.39
PRPF39-209ENST00000556353 GLOD4Q9HC38 313 aa6.35□□□□□ -1.39
PRPF39-209ENST00000556353 DLL3Q9NYJ7 618 aa6.35□□□□□ -1.39
PRPF39-209ENST00000556353 RNF7Q9UBF6 113 aa6.35□□□□□ -1.39
PRPF39-209ENST00000556353 XPR1Q9UBH6 696 aa6.35□□□□□ -1.39
PRPF39-209ENST00000556353 MED16Q9Y2X0 877 aa6.35□□□□□ -1.39
PRPF39-209ENST00000556353 TMX2Q9Y320 296 aa6.35□□□□□ -1.39
PRPF39-209ENST00000556353 ABCA5Q8WWZ7 1642 aa6.35□□□□□ -1.39
PRPF39-209ENST00000556353 ARAP1Q96P48 1450 aa6.34□□□□□ -1.39
PRPF39-209ENST00000556353 MYO1CO00159 1063 aa6.34□□□□□ -1.39
PRPF39-209ENST00000556353 THP07101 528 aa6.34□□□□□ -1.39
PRPF39-209ENST00000556353 FESP07332 822 aa6.34□□□□□ -1.39
PRPF39-209ENST00000556353 HSPA6P17066 643 aa6.34□□□□□ -1.39
PRPF39-209ENST00000556353 PDE1AP54750 535 aa6.34□□□□□ -1.39
PRPF39-209ENST00000556353 RAB1AP62820 205 aa6.34□□□□□ -1.39
PRPF39-209ENST00000556353 ZNF782Q6ZMW2 699 aaPredicted RBP6.34□□□□□ -1.39
PRPF39-209ENST00000556353 DENND1CQ8IV53 801 aa6.34□□□□□ -1.39
PRPF39-209ENST00000556353 NMRK2Q9NPI5 230 aa6.34□□□□□ -1.39
PRPF39-209ENST00000556353 PIH1D1Q9NWS0 290 aaKnown RBP6.34□□□□□ -1.39
PRPF39-209ENST00000556353 ZNF180Q9UJW8 692 aa6.34□□□□□ -1.39
PRPF39-209ENST00000556353 A0A088AWK7 358 aa6.33□□□□□ -1.4
PRPF39-209ENST00000556353 H3BML4 177 aa6.33□□□□□ -1.4
PRPF39-209ENST00000556353 ZNF213O14771 459 aa6.33□□□□□ -1.4
PRPF39-209ENST00000556353 PDGFRBP09619 1106 aa6.33□□□□□ -1.4
PRPF39-209ENST00000556353 CYP2C9P11712 490 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms