RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 MKRN2Q9H000 416 aaKnown RBP5.45□□□□□ -1.54
ATXN3-239ENST00000556315 ZNF302Q9NR11 478 aa5.45□□□□□ -1.54
ATXN3-239ENST00000556315 ARHGEF3Q9NR81 526 aa5.45□□□□□ -1.54
ATXN3-239ENST00000556315 SLC2A4RGQ9NR83 387 aa5.45□□□□□ -1.54
ATXN3-239ENST00000556315 CHST12Q9NRB3 414 aa5.45□□□□□ -1.54
ATXN3-239ENST00000556315 DACT1Q9NYF0 836 aa5.45□□□□□ -1.54
ATXN3-239ENST00000556315 SEC63Q9UGP8 760 aaKnown RBP5.45□□□□□ -1.54
ATXN3-239ENST00000556315 SMG5Q9UPR3 1016 aaKnown RBP5.45□□□□□ -1.54
ATXN3-239ENST00000556315 SSX2IPQ9Y2D8 614 aa5.45□□□□□ -1.54
ATXN3-239ENST00000556315 PCDHGA2Q9Y5H1 932 aa5.45□□□□□ -1.54
ATXN3-239ENST00000556315 NCOR2Q9Y618 2525 aa5.45□□□□□ -1.54
ATXN3-239ENST00000556315 CCDC195A0A1B0GUA6 201 aa5.44□□□□□ -1.54
ATXN3-239ENST00000556315 KANSL1LA0AUZ9 987 aa5.44□□□□□ -1.54
ATXN3-239ENST00000556315 TCAF2A6NFQ2 919 aa5.44□□□□□ -1.54
ATXN3-239ENST00000556315 ANHXE9PGG2 379 aa5.44□□□□□ -1.54
ATXN3-239ENST00000556315 MEIS1O00470 390 aa5.44□□□□□ -1.54
ATXN3-239ENST00000556315 N4BP1O75113 896 aaKnown RBP5.44□□□□□ -1.54
ATXN3-239ENST00000556315 ZC3H11AO75152 810 aaKnown RBP eCLIP5.44□□□□□ -1.54
ATXN3-239ENST00000556315 C22orf31O95567 290 aa5.44□□□□□ -1.54
ATXN3-239ENST00000556315 CCNE2O96020 404 aa5.44□□□□□ -1.54
ATXN3-239ENST00000556315 C1RP00736 705 aa5.44□□□□□ -1.54
ATXN3-239ENST00000556315 VTNP04004 478 aa5.44□□□□□ -1.54
ATXN3-239ENST00000556315 CNPP09543 421 aaKnown RBP5.44□□□□□ -1.54
ATXN3-239ENST00000556315 ZGLP1P0C6A0 271 aa5.44□□□□□ -1.54
ATXN3-239ENST00000556315 DMDP11532 3685 aa5.44□□□□□ -1.54
ATXN3-239ENST00000556315 LAMP2P13473 410 aa5.44□□□□□ -1.54
ATXN3-239ENST00000556315 GLULP15104 373 aa5.44□□□□□ -1.54
ATXN3-239ENST00000556315 TGM1P22735 817 aa5.44□□□□□ -1.54
ATXN3-239ENST00000556315 KIF5BP33176 963 aa5.44□□□□□ -1.54
ATXN3-239ENST00000556315 MAGEA9P43362 315 aa5.44□□□□□ -1.54
ATXN3-239ENST00000556315 NLRP11P59045 1033 aaKnown RBP5.44□□□□□ -1.54
ATXN3-239ENST00000556315 CDC42EP1Q00587 391 aa5.44□□□□□ -1.54
ATXN3-239ENST00000556315 CSTF1Q05048 431 aaKnown RBP5.44□□□□□ -1.54
ATXN3-239ENST00000556315 SART3Q15020 963 aaKnown RBP5.44□□□□□ -1.54
ATXN3-239ENST00000556315 CEP55Q53EZ4 464 aa5.44□□□□□ -1.54
ATXN3-239ENST00000556315 SWSAP1Q6NVH7 229 aa5.44□□□□□ -1.54
ATXN3-239ENST00000556315 GLB1LQ6UWU2 654 aa5.44□□□□□ -1.54
ATXN3-239ENST00000556315 TSPYL5Q86VY4 417 aaPredicted RBP5.44□□□□□ -1.54
ATXN3-239ENST00000556315 TMEM173Q86WV6 379 aaPredicted RBP5.44□□□□□ -1.54
ATXN3-239ENST00000556315 TEX2Q8IWB9 1127 aa5.44□□□□□ -1.54
ATXN3-239ENST00000556315 LILRA2Q8N149 483 aa5.44□□□□□ -1.54
ATXN3-239ENST00000556315 ZBTB44Q8NCP5 570 aa5.44□□□□□ -1.54
ATXN3-239ENST00000556315 PDZD8Q8NEN9 1154 aa5.44□□□□□ -1.54
ATXN3-239ENST00000556315 PJA1Q8NG27 643 aa5.44□□□□□ -1.54
ATXN3-239ENST00000556315 CTCFLQ8NI51 663 aaPredicted RBP5.44□□□□□ -1.54
ATXN3-239ENST00000556315 FEZF2Q8TBJ5 459 aa5.44□□□□□ -1.54
ATXN3-239ENST00000556315 HDAC7Q8WUI4 952 aa5.44□□□□□ -1.54
ATXN3-239ENST00000556315 KCNN1Q92952 543 aa5.44□□□□□ -1.54
ATXN3-239ENST00000556315 MYADMQ96S97 322 aa5.44□□□□□ -1.54
ATXN3-239ENST00000556315 MAP7D2Q96T17 732 aa5.44□□□□□ -1.54
ATXN3-239ENST00000556315 NELL2Q99435 816 aa5.44□□□□□ -1.54
ATXN3-239ENST00000556315 RNF32Q9H0A6 362 aa5.44□□□□□ -1.54
ATXN3-239ENST00000556315 NRDE2Q9H7Z3 1164 aa5.44□□□□□ -1.54
ATXN3-239ENST00000556315 AGO4Q9HCK5 861 aaKnown RBP5.44□□□□□ -1.54
ATXN3-239ENST00000556315 MRPL17Q9NRX2 175 aaKnown RBP5.44□□□□□ -1.54
ATXN3-239ENST00000556315 DIAPH3Q9NSV4 1193 aa5.44□□□□□ -1.54
ATXN3-239ENST00000556315 GPATCH2Q9NW75 528 aa5.44□□□□□ -1.54
ATXN3-239ENST00000556315 SPATA6Q9NWH7 488 aaPredicted RBP5.44□□□□□ -1.54
ATXN3-239ENST00000556315 ZSCAN32Q9NX65 697 aa5.44□□□□□ -1.54
ATXN3-239ENST00000556315 SIRPGQ9P1W8 387 aa5.44□□□□□ -1.54
ATXN3-239ENST00000556315 USP18Q9UMW8 372 aa5.44□□□□□ -1.54
ATXN3-239ENST00000556315 ZFP37Q9Y6Q3 630 aaPredicted RBP5.44□□□□□ -1.54
ATXN3-239ENST00000556315 CACNA1GO43497 2377 aa5.44□□□□□ -1.54
ATXN3-239ENST00000556315 TPRP12270 2363 aaKnown RBP5.43□□□□□ -1.54
ATXN3-239ENST00000556315 SLC30A4O14863 429 aa5.43□□□□□ -1.54
ATXN3-239ENST00000556315 NCAM2O15394 837 aa5.43□□□□□ -1.54
ATXN3-239ENST00000556315 ZNF623O75123 536 aa5.43□□□□□ -1.54
ATXN3-239ENST00000556315 OFD1O75665 1012 aa5.43□□□□□ -1.54
ATXN3-239ENST00000556315 DDAH1O94760 285 aa5.43□□□□□ -1.54
ATXN3-239ENST00000556315 FOSP01100 380 aaPredicted RBP5.43□□□□□ -1.54
ATXN3-239ENST00000556315 NAT2P11245 290 aa5.43□□□□□ -1.54
ATXN3-239ENST00000556315 DARSP14868 501 aaKnown RBP5.43□□□□□ -1.54
ATXN3-239ENST00000556315 TRHRP34981 398 aaPredicted RBP5.43□□□□□ -1.54
ATXN3-239ENST00000556315 GPC5P78333 572 aa5.43□□□□□ -1.54
ATXN3-239ENST00000556315 RNASELQ05823 741 aaKnown RBP5.43□□□□□ -1.54
ATXN3-239ENST00000556315 ITGB3BPQ13352 177 aaPredicted RBP5.43□□□□□ -1.54
ATXN3-239ENST00000556315 NR0B2Q15466 257 aa5.43□□□□□ -1.54
ATXN3-239ENST00000556315 UBE2SQ16763 222 aa5.43□□□□□ -1.54
ATXN3-239ENST00000556315 SLC44A4Q53GD3 710 aa5.43□□□□□ -1.54
ATXN3-239ENST00000556315 ANKRD39Q53RE8 183 aa5.43□□□□□ -1.54
ATXN3-239ENST00000556315 NOMO2Q5JPE7 1267 aa5.43□□□□□ -1.54
ATXN3-239ENST00000556315 EFCAB12Q6NXP0 572 aa5.43□□□□□ -1.54
ATXN3-239ENST00000556315 RSPO2Q6UXX9 243 aaPredicted RBP5.43□□□□□ -1.54
ATXN3-239ENST00000556315 RALYLQ86SE5 291 aaKnown RBP5.43□□□□□ -1.54
ATXN3-239ENST00000556315 TMTC2Q8N394 836 aa5.43□□□□□ -1.54
ATXN3-239ENST00000556315 IGDCC4Q8TDY8 1250 aa5.43□□□□□ -1.54
ATXN3-239ENST00000556315 NELL1Q92832 810 aa5.43□□□□□ -1.54
ATXN3-239ENST00000556315 DDX23Q9BUQ8 820 aaKnown RBP5.43□□□□□ -1.54
ATXN3-239ENST00000556315 FAM126AQ9BYI3 521 aaPredicted RBP5.43□□□□□ -1.54
ATXN3-239ENST00000556315 EPC1Q9H2F5 836 aa5.43□□□□□ -1.54
ATXN3-239ENST00000556315 PLEKHA4Q9H4M7 779 aa5.43□□□□□ -1.54
ATXN3-239ENST00000556315 RXFP1Q9HBX9 757 aa5.43□□□□□ -1.54
ATXN3-239ENST00000556315 MAN1C1Q9NR34 630 aa5.43□□□□□ -1.54
ATXN3-239ENST00000556315 NRBP2Q9NSY0 501 aa5.43□□□□□ -1.54
ATXN3-239ENST00000556315 TBC1D13Q9NVG8 400 aa5.43□□□□□ -1.54
ATXN3-239ENST00000556315 DUSP13Q9UII6 198 aa5.43□□□□□ -1.54
ATXN3-239ENST00000556315 GMEB2Q9UKD1 530 aa5.43□□□□□ -1.54
ATXN3-239ENST00000556315 AKT3Q9Y243 479 aa5.43□□□□□ -1.54
ATXN3-239ENST00000556315 FAN1Q9Y2M0 1017 aa5.43□□□□□ -1.54
ATXN3-239ENST00000556315 NCANO14594 1321 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms