RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 FAM3CQ92520 227 aa13.5□□□□□ -0.25
SNX6-207ENST00000556303 SYAP1Q96A49 352 aaPredicted RBP13.5□□□□□ -0.25
SNX6-207ENST00000556303 SPATA17Q96L03 361 aa13.5□□□□□ -0.25
SNX6-207ENST00000556303 PI4K2AQ9BTU6 479 aa13.5□□□□□ -0.25
SNX6-207ENST00000556303 KIF9Q9HAQ2 790 aa13.5□□□□□ -0.25
SNX6-207ENST00000556303 THG1LQ9NWX6 298 aaKnown RBP13.5□□□□□ -0.25
SNX6-207ENST00000556303 EHD2Q9NZN4 543 aa13.5□□□□□ -0.25
SNX6-207ENST00000556303 GTF3C4Q9UKN8 822 aa13.5□□□□□ -0.25
SNX6-207ENST00000556303 MTF2Q9Y483 593 aaPredicted RBP13.5□□□□□ -0.25
SNX6-207ENST00000556303 PRR23AA6NEV1 266 aa13.49□□□□□ -0.25
SNX6-207ENST00000556303 SHISA7A6NL88 538 aa13.49□□□□□ -0.25
SNX6-207ENST00000556303 MAPK13O15264 365 aa13.49□□□□□ -0.25
SNX6-207ENST00000556303 LAMTOR5O43504 91 aa13.49□□□□□ -0.25
SNX6-207ENST00000556303 CST3P01034 146 aaPredicted RBP13.49□□□□□ -0.25
SNX6-207ENST00000556303 SP9P0CG40 484 aa13.49□□□□□ -0.25
SNX6-207ENST00000556303 PFKLP17858 780 aa13.49□□□□□ -0.25
SNX6-207ENST00000556303 CYP2F1P24903 491 aa13.49□□□□□ -0.25
SNX6-207ENST00000556303 TARSP26639 723 aaKnown RBP13.49□□□□□ -0.25
SNX6-207ENST00000556303 GNL1P36915 607 aaPredicted RBP13.49□□□□□ -0.25
SNX6-207ENST00000556303 AVPR1AP37288 418 aa13.49□□□□□ -0.25
SNX6-207ENST00000556303 NLRP12P59046 1061 aa13.49□□□□□ -0.25
SNX6-207ENST00000556303 ENPEPQ07075 957 aa13.49□□□□□ -0.25
SNX6-207ENST00000556303 FZD5Q13467 585 aa13.49□□□□□ -0.25
SNX6-207ENST00000556303 BECN1Q14457 450 aa13.49□□□□□ -0.25
SNX6-207ENST00000556303 ZNF268Q14587 947 aaPredicted RBP13.49□□□□□ -0.25
SNX6-207ENST00000556303 NFIL3Q16649 462 aa13.49□□□□□ -0.25
SNX6-207ENST00000556303 FRMD5Q7Z6J6 570 aa13.49□□□□□ -0.25
SNX6-207ENST00000556303 OSTM1Q86WC4 334 aa13.49□□□□□ -0.25
SNX6-207ENST00000556303 GRAMD1CQ8IYS0 662 aa13.49□□□□□ -0.25
SNX6-207ENST00000556303 CMTM8Q8IZV2 173 aa13.49□□□□□ -0.25
SNX6-207ENST00000556303 KIAA0895Q8NCT3 520 aa13.49□□□□□ -0.25
SNX6-207ENST00000556303 BPIFB1Q8TDL5 484 aa13.49□□□□□ -0.25
SNX6-207ENST00000556303 PARD3BQ8TEW8 1205 aa13.49□□□□□ -0.25
SNX6-207ENST00000556303 MRPS31Q92665 395 aaKnown RBP13.49□□□□□ -0.25
SNX6-207ENST00000556303 CCDC127Q96BQ5 260 aa13.49□□□□□ -0.25
SNX6-207ENST00000556303 MMS19Q96T76 1030 aa13.49□□□□□ -0.25
SNX6-207ENST00000556303 SYT15Q9BQS2 421 aa13.49□□□□□ -0.25
SNX6-207ENST00000556303 SLC46A2Q9BY10 475 aa13.49□□□□□ -0.25
SNX6-207ENST00000556303 FAM126AQ9BYI3 521 aaPredicted RBP13.49□□□□□ -0.25
SNX6-207ENST00000556303 KCTD10Q9H3F6 313 aa13.49□□□□□ -0.25
SNX6-207ENST00000556303 SPATA6Q9NWH7 488 aaPredicted RBP13.49□□□□□ -0.25
SNX6-207ENST00000556303 MAGEC2Q9UBF1 373 aaPredicted RBP13.49□□□□□ -0.25
SNX6-207ENST00000556303 PIAS3Q9Y6X2 628 aa13.49□□□□□ -0.25
SNX6-207ENST00000556303 NUP210Q8TEM1 1887 aaPredicted RBP13.48□□□□□ -0.25
SNX6-207ENST00000556303 MYBPHLA2RUH7 354 aa13.48□□□□□ -0.25
SNX6-207ENST00000556303 IKBKBO14920 756 aa13.48□□□□□ -0.25
SNX6-207ENST00000556303 CALUO43852 315 aaPredicted RBP13.48□□□□□ -0.25
SNX6-207ENST00000556303 RHOBTB3O94955 611 aa13.48□□□□□ -0.25
SNX6-207ENST00000556303 RPN1P04843 607 aaKnown RBP13.48□□□□□ -0.25
SNX6-207ENST00000556303 CD72P21854 359 aa13.48□□□□□ -0.25
SNX6-207ENST00000556303 ACAT1P24752 427 aaKnown RBP13.48□□□□□ -0.25
SNX6-207ENST00000556303 PPP3CCP48454 512 aa13.48□□□□□ -0.25
SNX6-207ENST00000556303 PDE6CP51160 858 aa13.48□□□□□ -0.25
SNX6-207ENST00000556303 NDUFA8P51970 172 aa13.48□□□□□ -0.25
SNX6-207ENST00000556303 TNNC1P63316 161 aa13.48□□□□□ -0.25
SNX6-207ENST00000556303 KCNB1Q14721 858 aa13.48□□□□□ -0.25
SNX6-207ENST00000556303 PPP2R5DQ14738 602 aa13.48□□□□□ -0.25
SNX6-207ENST00000556303 WDR72Q3MJ13 1102 aa13.48□□□□□ -0.25
SNX6-207ENST00000556303 STXBP5Q5T5C0 1151 aa13.48□□□□□ -0.25
SNX6-207ENST00000556303 SCARA3Q6AZY7 606 aa13.48□□□□□ -0.25
SNX6-207ENST00000556303 TMEM150AQ86TG1 271 aa13.48□□□□□ -0.25
SNX6-207ENST00000556303 MON1AQ86VX9 555 aa13.48□□□□□ -0.25
SNX6-207ENST00000556303 RALGPS2Q86X27 583 aaPredicted RBP13.48□□□□□ -0.25
SNX6-207ENST00000556303 FSIP1Q8NA03 581 aa13.48□□□□□ -0.25
SNX6-207ENST00000556303 MYCBPAPQ8TBZ2 947 aa13.48□□□□□ -0.25
SNX6-207ENST00000556303 GZF1Q9H116 711 aaPredicted RBP13.48□□□□□ -0.25
SNX6-207ENST00000556303 CHRDQ9H2X0 955 aa13.48□□□□□ -0.25
SNX6-207ENST00000556303 SNX25Q9H3E2 840 aa13.48□□□□□ -0.25
SNX6-207ENST00000556303 TRAF3IP3Q9Y228 551 aa13.48□□□□□ -0.25
SNX6-207ENST00000556303 OTOGLQ3ZCN5 2332 aa13.48□□□□□ -0.25
SNX6-207ENST00000556303 DENND4CQ5VZ89 1909 aa13.47□□□□□ -0.25
SNX6-207ENST00000556303 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.47□□□□□ -0.25
SNX6-207ENST00000556303 SLC38A8A6NNN8 435 aa13.47□□□□□ -0.25
SNX6-207ENST00000556303 TRIM66O15016 1216 aa13.47□□□□□ -0.25
SNX6-207ENST00000556303 PHACTR2O75167 634 aa13.47□□□□□ -0.25
SNX6-207ENST00000556303 LRRN2O75325 713 aa13.47□□□□□ -0.25
SNX6-207ENST00000556303 LMNAP02545 664 aaKnown RBP13.47□□□□□ -0.25
SNX6-207ENST00000556303 LMO2P25791 158 aa13.47□□□□□ -0.25
SNX6-207ENST00000556303 CYP4F8P98187 520 aa13.47□□□□□ -0.25
SNX6-207ENST00000556303 DDR2Q16832 855 aa13.47□□□□□ -0.25
SNX6-207ENST00000556303 ASCL5Q7RTU5 278 aa13.47□□□□□ -0.25
SNX6-207ENST00000556303 MAML2Q8IZL2 1156 aaPredicted RBP13.47□□□□□ -0.25
SNX6-207ENST00000556303 SYNPOQ8N3V7 929 aa13.47□□□□□ -0.25
SNX6-207ENST00000556303 KIAA1958Q8N8K9 716 aa13.47□□□□□ -0.25
SNX6-207ENST00000556303 TMC2Q8TDI7 906 aa13.47□□□□□ -0.25
SNX6-207ENST00000556303 ZNF516Q92618 1163 aa13.47□□□□□ -0.25
SNX6-207ENST00000556303 RSPRY1Q96DX4 576 aa13.47□□□□□ -0.25
SNX6-207ENST00000556303 FAM84AQ96KN4 292 aa13.47□□□□□ -0.25
SNX6-207ENST00000556303 LRRC3BQ96PB8 259 aa13.47□□□□□ -0.25
SNX6-207ENST00000556303 XYLT2Q9H1B5 865 aa13.47□□□□□ -0.25
SNX6-207ENST00000556303 PRMT8Q9NR22 394 aaPredicted RBP13.47□□□□□ -0.25
SNX6-207ENST00000556303 TDP1Q9NUW8 608 aa13.47□□□□□ -0.25
SNX6-207ENST00000556303 FRMD4BQ9Y2L6 1034 aa13.47□□□□□ -0.25
SNX6-207ENST00000556303 PCDHGA2Q9Y5H1 932 aa13.47□□□□□ -0.25
SNX6-207ENST00000556303 FANCMQ8IYD8 2048 aa13.47□□□□□ -0.25
SNX6-207ENST00000556303 NCANO14594 1321 aa13.46□□□□□ -0.25
SNX6-207ENST00000556303 C4BPAP04003 597 aaKnown RBP13.46□□□□□ -0.25
SNX6-207ENST00000556303 NR3C1P04150 777 aa13.46□□□□□ -0.25
SNX6-207ENST00000556303 PDGFRBP09619 1106 aa13.46□□□□□ -0.25
SNX6-207ENST00000556303 P4HA1P13674 534 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms