RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 LRRC52Q8N7C0 313 aa14.27□□□□□ -0.13
TGFB3-204ENST00000556285 CACTINQ8WUQ7 758 aaKnown RBP14.27□□□□□ -0.13
TGFB3-204ENST00000556285 SLC22A12Q96S37 553 aa14.27□□□□□ -0.13
TGFB3-204ENST00000556285 ACBD6Q9BR61 282 aa14.27□□□□□ -0.13
TGFB3-204ENST00000556285 FBRSL1Q9HCM7 1045 aaKnown RBP14.27□□□□□ -0.13
TGFB3-204ENST00000556285 GDAP2Q9NXN4 497 aa14.27□□□□□ -0.13
TGFB3-204ENST00000556285 ITGA11Q9UKX5 1188 aa14.27□□□□□ -0.13
TGFB3-204ENST00000556285 CDV3Q9UKY7 258 aaKnown RBP14.27□□□□□ -0.13
TGFB3-204ENST00000556285 MORC2Q9Y6X9 1032 aaPredicted RBP14.27□□□□□ -0.13
TGFB3-204ENST00000556285 CACNA1BQ00975 2339 aa14.26□□□□□ -0.13
TGFB3-204ENST00000556285 GABRDO14764 452 aa14.26□□□□□ -0.13
TGFB3-204ENST00000556285 STX6O43752 255 aa14.26□□□□□ -0.13
TGFB3-204ENST00000556285 NOL4O94818 638 aa14.26□□□□□ -0.13
TGFB3-204ENST00000556285 PAPSS2O95340 614 aaPredicted RBP14.26□□□□□ -0.13
TGFB3-204ENST00000556285 CSH1P0DML2 217 aa14.26□□□□□ -0.13
TGFB3-204ENST00000556285 CSH2P0DML3 217 aa14.26□□□□□ -0.13
TGFB3-204ENST00000556285 LMO2P25791 158 aa14.26□□□□□ -0.13
TGFB3-204ENST00000556285 AVPR1AP37288 418 aa14.26□□□□□ -0.13
TGFB3-204ENST00000556285 PXNP49023 591 aaPredicted RBP14.26□□□□□ -0.13
TGFB3-204ENST00000556285 RBP5P82980 135 aa14.26□□□□□ -0.13
TGFB3-204ENST00000556285 SIM2Q14190 667 aaPredicted RBP14.26□□□□□ -0.13
TGFB3-204ENST00000556285 CCDC6Q16204 474 aa14.26□□□□□ -0.13
TGFB3-204ENST00000556285 NFE2Q16621 373 aaPredicted RBP14.26□□□□□ -0.13
TGFB3-204ENST00000556285 LAIR1Q6GTX8 287 aa14.26□□□□□ -0.13
TGFB3-204ENST00000556285 C1orf228Q6PIY5 440 aa14.26□□□□□ -0.13
TGFB3-204ENST00000556285 MON1AQ86VX9 555 aa14.26□□□□□ -0.13
TGFB3-204ENST00000556285 TMEM86AQ8N2M4 240 aa14.26□□□□□ -0.13
TGFB3-204ENST00000556285 LINC00301Q8NCQ3 95 aa14.26□□□□□ -0.13
TGFB3-204ENST00000556285 LEO1Q8WVC0 666 aaPredicted RBP14.26□□□□□ -0.13
TGFB3-204ENST00000556285 SECISBP2LQ93073 1101 aaKnown RBP14.26□□□□□ -0.13
TGFB3-204ENST00000556285 INTS4Q96HW7 963 aaKnown RBP14.26□□□□□ -0.13
TGFB3-204ENST00000556285 CYP2S1Q96SQ9 504 aa14.26□□□□□ -0.13
TGFB3-204ENST00000556285 RXFP3Q9NSD7 469 aa14.26□□□□□ -0.13
TGFB3-204ENST00000556285 SEMA4GQ9NTN9 838 aa14.26□□□□□ -0.13
TGFB3-204ENST00000556285 TDP1Q9NUW8 608 aa14.26□□□□□ -0.13
TGFB3-204ENST00000556285 INTS13Q9NVM9 706 aa14.26□□□□□ -0.13
TGFB3-204ENST00000556285 THG1LQ9NWX6 298 aaKnown RBP14.26□□□□□ -0.13
TGFB3-204ENST00000556285 GMEB2Q9UKD1 530 aa14.26□□□□□ -0.13
TGFB3-204ENST00000556285 MAP1BP46821 2468 aaKnown RBP14.26□□□□□ -0.13
TGFB3-204ENST00000556285 NUP205Q92621 2012 aa14.25□□□□□ -0.13
TGFB3-204ENST00000556285 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.25□□□□□ -0.13
TGFB3-204ENST00000556285 ANTXRLA6NF34 631 aa14.25□□□□□ -0.13
TGFB3-204ENST00000556285 TMEM191BP0C7N4 346 aa14.25□□□□□ -0.13
TGFB3-204ENST00000556285 CASP1P29466 404 aa14.25□□□□□ -0.13
TGFB3-204ENST00000556285 PSMC1P62191 440 aaKnown RBP14.25□□□□□ -0.13
TGFB3-204ENST00000556285 MYL7Q01449 175 aa14.25□□□□□ -0.13
TGFB3-204ENST00000556285 LMNB2Q03252 620 aa14.25□□□□□ -0.13
TGFB3-204ENST00000556285 ALCAMQ13740 583 aa14.25□□□□□ -0.13
TGFB3-204ENST00000556285 RUNX3Q13761 415 aa14.25□□□□□ -0.13
TGFB3-204ENST00000556285 STK38Q15208 465 aa14.25□□□□□ -0.13
TGFB3-204ENST00000556285 FOXD4L5Q5VV16 416 aaPredicted RBP14.25□□□□□ -0.13
TGFB3-204ENST00000556285 LONP2Q86WA8 852 aa14.25□□□□□ -0.13
TGFB3-204ENST00000556285 SCN4BQ8IWT1 228 aa14.25□□□□□ -0.13
TGFB3-204ENST00000556285 CCDC65Q8IXS2 484 aa14.25□□□□□ -0.13
TGFB3-204ENST00000556285 TOP6BLQ8N6T0 577 aa14.25□□□□□ -0.13
TGFB3-204ENST00000556285 GPR161Q8N6U8 529 aaKnown RBP14.25□□□□□ -0.13
TGFB3-204ENST00000556285 TTC16Q8NEE8 873 aa14.25□□□□□ -0.13
TGFB3-204ENST00000556285 KBTBD7Q8WVZ9 684 aa14.25□□□□□ -0.13
TGFB3-204ENST00000556285 FOXD4L4Q8WXT5 416 aaPredicted RBP14.25□□□□□ -0.13
TGFB3-204ENST00000556285 MRPS31Q92665 395 aaKnown RBP14.25□□□□□ -0.13
TGFB3-204ENST00000556285 DHX58Q96C10 678 aa14.25□□□□□ -0.13
TGFB3-204ENST00000556285 TRIM9Q9C026 710 aa14.25□□□□□ -0.13
TGFB3-204ENST00000556285 TMEM206Q9H813 350 aa14.25□□□□□ -0.13
TGFB3-204ENST00000556285 TRPC7Q9HCX4 862 aa14.25□□□□□ -0.13
TGFB3-204ENST00000556285 ABCB6Q9NP58 842 aa14.25□□□□□ -0.13
TGFB3-204ENST00000556285 CRTAC1Q9NQ79 661 aa14.25□□□□□ -0.13
TGFB3-204ENST00000556285 KBTBD4Q9NVX7 518 aa14.25□□□□□ -0.13
TGFB3-204ENST00000556285 RAB23Q9ULC3 237 aa14.25□□□□□ -0.13
TGFB3-204ENST00000556285 NME7Q9Y5B8 376 aa14.25□□□□□ -0.13
TGFB3-204ENST00000556285 MYOFQ9NZM1 2061 aa14.24□□□□□ -0.13
TGFB3-204ENST00000556285 TPRP12270 2363 aaKnown RBP14.24□□□□□ -0.13
TGFB3-204ENST00000556285 K7ELQ4 463 aaPredicted RBP14.24□□□□□ -0.13
TGFB3-204ENST00000556285 SPTLC2O15270 562 aa14.24□□□□□ -0.13
TGFB3-204ENST00000556285 EGFP01133 1207 aa14.24□□□□□ -0.13
TGFB3-204ENST00000556285 RPL10AP62906 217 aaKnown RBP14.24□□□□□ -0.13
TGFB3-204ENST00000556285 TMEM196Q5HYL7 178 aa14.24□□□□□ -0.13
TGFB3-204ENST00000556285 FAM171BQ6P995 826 aa14.24□□□□□ -0.13
TGFB3-204ENST00000556285 SHC4Q6S5L8 630 aa14.24□□□□□ -0.13
TGFB3-204ENST00000556285 PRR23CQ6ZRP0 262 aa14.24□□□□□ -0.13
TGFB3-204ENST00000556285 EPM2AIP1Q7L775 607 aaPredicted RBP14.24□□□□□ -0.13
TGFB3-204ENST00000556285 LIMS2Q7Z4I7 341 aa14.24□□□□□ -0.13
TGFB3-204ENST00000556285 SPATA2LQ8IUW3 424 aaPredicted RBP14.24□□□□□ -0.13
TGFB3-204ENST00000556285 FAM160A2Q8N612 972 aaPredicted RBP14.24□□□□□ -0.13
TGFB3-204ENST00000556285 RDH13Q8NBN7 331 aa14.24□□□□□ -0.13
TGFB3-204ENST00000556285 TRMT2BQ96GJ1 504 aaKnown RBP14.24□□□□□ -0.13
TGFB3-204ENST00000556285 HPDLQ96IR7 371 aa14.24□□□□□ -0.13
TGFB3-204ENST00000556285 ANKRD36BP1Q96IX9 119 aa14.24□□□□□ -0.13
TGFB3-204ENST00000556285 MYRFLQ96LU7 910 aa14.24□□□□□ -0.13
TGFB3-204ENST00000556285 SYT15Q9BQS2 421 aa14.24□□□□□ -0.13
TGFB3-204ENST00000556285 RTKNQ9BST9 563 aa14.24□□□□□ -0.13
TGFB3-204ENST00000556285 ZSCAN16Q9H4T2 348 aaPredicted RBP14.24□□□□□ -0.13
TGFB3-204ENST00000556285 HSPBP1Q9NZL4 362 aa14.24□□□□□ -0.13
TGFB3-204ENST00000556285 C2orf78A6NCI8 922 aa14.23□□□□□ -0.13
TGFB3-204ENST00000556285 ZNF233A6NK53 670 aa14.23□□□□□ -0.13
TGFB3-204ENST00000556285 PRR5-ARHGAP8B1AHC4 643 aa14.23□□□□□ -0.13
TGFB3-204ENST00000556285 TRDMT1O14717 391 aaKnown RBP14.23□□□□□ -0.13
TGFB3-204ENST00000556285 TGFB1I1O43294 461 aa14.23□□□□□ -0.13
TGFB3-204ENST00000556285 CST3P01034 146 aaPredicted RBP14.23□□□□□ -0.13
TGFB3-204ENST00000556285 RETP07949 1114 aa14.23□□□□□ -0.13
TGFB3-204ENST00000556285 ADRB1P08588 477 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms