RNA–Protein interactions for RNA: ENST00000556164.5

PRKCH-220, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 429 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-220ENST00000556164 ARRDC1-AS1Q9H2J1 176 aa6.34□□□□□ -1.39
PRKCH-220ENST00000556164 KMT5AQ9NQR1 393 aa6.34□□□□□ -1.39
PRKCH-220ENST00000556164 GTSE1Q9NYZ3 720 aa6.34□□□□□ -1.39
PRKCH-220ENST00000556164 CNTN3Q9P232 1028 aa6.34□□□□□ -1.39
PRKCH-220ENST00000556164 ANKFY1Q9P2R3 1169 aa6.34□□□□□ -1.39
PRKCH-220ENST00000556164 TUBGCP4Q9UGJ1 667 aa6.34□□□□□ -1.39
PRKCH-220ENST00000556164 RALYQ9UKM9 306 aaKnown RBP6.34□□□□□ -1.39
PRKCH-220ENST00000556164 MAFFQ9ULX9 164 aa6.34□□□□□ -1.39
PRKCH-220ENST00000556164 USP24Q9UPU5 2620 aa6.34□□□□□ -1.39
PRKCH-220ENST00000556164 KIAA1549LQ6ZVL6 1849 aa6.34□□□□□ -1.4
PRKCH-220ENST00000556164 EXTL3O43909 919 aa6.33□□□□□ -1.4
PRKCH-220ENST00000556164 JAK2O60674 1132 aa6.33□□□□□ -1.4
PRKCH-220ENST00000556164 CPNE3O75131 537 aaKnown RBP6.33□□□□□ -1.4
PRKCH-220ENST00000556164 HIP1RO75146 1068 aa6.33□□□□□ -1.4
PRKCH-220ENST00000556164 RPP40O75818 363 aaKnown RBP6.33□□□□□ -1.4
PRKCH-220ENST00000556164 EPN2O95208 641 aa6.33□□□□□ -1.4
PRKCH-220ENST00000556164 LARGE1O95461 756 aa6.33□□□□□ -1.4
PRKCH-220ENST00000556164 VNN2O95498 520 aa6.33□□□□□ -1.4
PRKCH-220ENST00000556164 RPLP1P05386 114 aaKnown RBP6.33□□□□□ -1.4
PRKCH-220ENST00000556164 CCDC192P0DO97 292 aa6.33□□□□□ -1.4
PRKCH-220ENST00000556164 MCF2P10911 925 aa6.33□□□□□ -1.4
PRKCH-220ENST00000556164 MUTP22033 750 aa6.33□□□□□ -1.4
PRKCH-220ENST00000556164 PAX3P23760 479 aa6.33□□□□□ -1.4
PRKCH-220ENST00000556164 MATR3P43243 847 aaKnown RBP eCLIP6.33□□□□□ -1.4
PRKCH-220ENST00000556164 ALDH1A3P47895 512 aa6.33□□□□□ -1.4
PRKCH-220ENST00000556164 PXNP49023 591 aaPredicted RBP6.33□□□□□ -1.4
PRKCH-220ENST00000556164 LIMK1P53667 647 aa6.33□□□□□ -1.4
PRKCH-220ENST00000556164 GUCY1B3Q02153 619 aa6.33□□□□□ -1.4
PRKCH-220ENST00000556164 YWHAHQ04917 246 aaPredicted RBP6.33□□□□□ -1.4
PRKCH-220ENST00000556164 TNK2Q07912 1038 aa6.33□□□□□ -1.4
PRKCH-220ENST00000556164 DUSP4Q13115 394 aa6.33□□□□□ -1.4
PRKCH-220ENST00000556164 CBLBQ13191 982 aa6.33□□□□□ -1.4
PRKCH-220ENST00000556164 CCINQ13939 588 aa6.33□□□□□ -1.4
PRKCH-220ENST00000556164 NOLC1Q14978 699 aaKnown RBP eCLIP6.33□□□□□ -1.4
PRKCH-220ENST00000556164 SAFBQ15424 915 aaKnown RBP eCLIP6.33□□□□□ -1.4
PRKCH-220ENST00000556164 ME3Q16798 604 aa6.33□□□□□ -1.4
PRKCH-220ENST00000556164 ARHGAP29Q52LW3 1261 aa6.33□□□□□ -1.4
PRKCH-220ENST00000556164 SEZ6Q53EL9 994 aa6.33□□□□□ -1.4
PRKCH-220ENST00000556164 ARHGAP15Q53QZ3 475 aa6.33□□□□□ -1.4
PRKCH-220ENST00000556164 GPR158Q5T848 1215 aa6.33□□□□□ -1.4
PRKCH-220ENST00000556164 STPG1Q5TH74 334 aa6.33□□□□□ -1.4
PRKCH-220ENST00000556164 CACNA2D4Q7Z3S7 1137 aa6.33□□□□□ -1.4
PRKCH-220ENST00000556164 USP37Q86T82 979 aa6.33□□□□□ -1.4
PRKCH-220ENST00000556164 KBTBD6Q86V97 674 aa6.33□□□□□ -1.4
PRKCH-220ENST00000556164 WDR5BQ86VZ2 330 aa6.33□□□□□ -1.4
PRKCH-220ENST00000556164 BPHLQ86WA6 291 aaPredicted RBP6.33□□□□□ -1.4
PRKCH-220ENST00000556164 ARID3BQ8IVW6 561 aaPredicted RBP6.33□□□□□ -1.4
PRKCH-220ENST00000556164 TMEM130Q8N3G9 435 aa6.33□□□□□ -1.4
PRKCH-220ENST00000556164 GAB3Q8WWW8 586 aa6.33□□□□□ -1.4
PRKCH-220ENST00000556164 GTF3C6Q969F1 213 aa6.33□□□□□ -1.4
PRKCH-220ENST00000556164 LRRC3Q9BY71 257 aa6.33□□□□□ -1.4
PRKCH-220ENST00000556164 ATXN3LQ9H3M9 355 aa6.33□□□□□ -1.4
PRKCH-220ENST00000556164 SMOC1Q9H4F8 434 aa6.33□□□□□ -1.4
PRKCH-220ENST00000556164 PTPRHQ9HD43 1115 aa6.33□□□□□ -1.4
PRKCH-220ENST00000556164 RXFP3Q9NSD7 469 aa6.33□□□□□ -1.4
PRKCH-220ENST00000556164 DDX19AQ9NUU7 478 aaKnown RBP6.33□□□□□ -1.4
PRKCH-220ENST00000556164 ARHGAP28Q9P2N2 729 aa6.33□□□□□ -1.4
PRKCH-220ENST00000556164 TIMM13Q9Y5L4 95 aaPredicted RBP6.33□□□□□ -1.4
PRKCH-220ENST00000556164 ABCA7Q8IZY2 2146 aa6.32□□□□□ -1.4
PRKCH-220ENST00000556164 ESYT3A0FGR9 886 aa6.32□□□□□ -1.4
PRKCH-220ENST00000556164 MTMR11A4FU01 709 aa6.32□□□□□ -1.4
PRKCH-220ENST00000556164 ABLIM1O14639 778 aa6.32□□□□□ -1.4
PRKCH-220ENST00000556164 SLC16A4O15374 487 aa6.32□□□□□ -1.4
PRKCH-220ENST00000556164 MEFVO15553 781 aaPredicted RBP6.32□□□□□ -1.4
PRKCH-220ENST00000556164 SOAT2O75908 522 aa6.32□□□□□ -1.4
PRKCH-220ENST00000556164 OAZ2O95190 189 aa6.32□□□□□ -1.4
PRKCH-220ENST00000556164 PRAMEF12O95522 483 aa6.32□□□□□ -1.4
PRKCH-220ENST00000556164 FGF19O95750 216 aa6.32□□□□□ -1.4
PRKCH-220ENST00000556164 ZNF806P0C7X5 589 aa6.32□□□□□ -1.4
PRKCH-220ENST00000556164 CXCL8P10145 99 aa6.32□□□□□ -1.4
PRKCH-220ENST00000556164 PROZP22891 400 aa6.32□□□□□ -1.4
PRKCH-220ENST00000556164 GABRR2P28476 465 aa6.32□□□□□ -1.4
PRKCH-220ENST00000556164 HOXA6P31267 233 aa6.32□□□□□ -1.4
PRKCH-220ENST00000556164 GNALP38405 381 aa6.32□□□□□ -1.4
PRKCH-220ENST00000556164 SHC2P98077 582 aa6.32□□□□□ -1.4
PRKCH-220ENST00000556164 CYP4F8P98187 520 aa6.32□□□□□ -1.4
PRKCH-220ENST00000556164 SPAG1Q07617 926 aa6.32□□□□□ -1.4
PRKCH-220ENST00000556164 STRN3Q13033 797 aa6.32□□□□□ -1.4
PRKCH-220ENST00000556164 GPR17Q13304 367 aa6.32□□□□□ -1.4
PRKCH-220ENST00000556164 ORC1Q13415 861 aa6.32□□□□□ -1.4
PRKCH-220ENST00000556164 SLC10A6Q3KNW5 377 aa6.32□□□□□ -1.4
PRKCH-220ENST00000556164 ITPRIPL2Q3MIP1 535 aa6.32□□□□□ -1.4
PRKCH-220ENST00000556164 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.32□□□□□ -1.4
PRKCH-220ENST00000556164 TTC38Q5R3I4 469 aa6.32□□□□□ -1.4
PRKCH-220ENST00000556164 MEI1Q5TIA1 1274 aa6.32□□□□□ -1.4
PRKCH-220ENST00000556164 RNF43Q68DV7 783 aa6.32□□□□□ -1.4
PRKCH-220ENST00000556164 PKN3Q6P5Z2 889 aa6.32□□□□□ -1.4
PRKCH-220ENST00000556164 DSTYKQ6XUX3 929 aa6.32□□□□□ -1.4
PRKCH-220ENST00000556164 GAREM2Q75VX8 874 aa6.32□□□□□ -1.4
PRKCH-220ENST00000556164 DNAJB7Q7Z6W7 309 aaPredicted RBP6.32□□□□□ -1.4
PRKCH-220ENST00000556164 TTC9BQ8N6N2 239 aa6.32□□□□□ -1.4
PRKCH-220ENST00000556164 BEST2Q8NFU1 509 aa6.32□□□□□ -1.4
PRKCH-220ENST00000556164 BPIFB1Q8TDL5 484 aa6.32□□□□□ -1.4
PRKCH-220ENST00000556164 SNX29Q8TEQ0 813 aa6.32□□□□□ -1.4
PRKCH-220ENST00000556164 EDEM1Q92611 657 aa6.32□□□□□ -1.4
PRKCH-220ENST00000556164 PSMG2Q969U7 264 aa6.32□□□□□ -1.4
PRKCH-220ENST00000556164 LOXL4Q96JB6 756 aa6.32□□□□□ -1.4
PRKCH-220ENST00000556164 ZBTB45Q96K62 511 aaPredicted RBP6.32□□□□□ -1.4
PRKCH-220ENST00000556164 LRRC3BQ96PB8 259 aa6.32□□□□□ -1.4
PRKCH-220ENST00000556164 GCNAQ96QF7 691 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms