RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 TMEM184AQ6ZMB5 413 aa8.11□□□□□ -1.11
TDP1-214ENST00000556063 RNF19BQ6ZMZ0 732 aa8.11□□□□□ -1.11
TDP1-214ENST00000556063 ITIH5Q86UX2 942 aa8.11□□□□□ -1.11
TDP1-214ENST00000556063 LRRTM3Q86VH5 581 aa8.11□□□□□ -1.11
TDP1-214ENST00000556063 FAM71AQ8IYT1 594 aa8.11□□□□□ -1.11
TDP1-214ENST00000556063 ELMOD1Q8N336 334 aa8.11□□□□□ -1.11
TDP1-214ENST00000556063 UBR7Q8N806 425 aa8.11□□□□□ -1.11
TDP1-214ENST00000556063 SLC4A11Q8NBS3 891 aa8.11□□□□□ -1.11
TDP1-214ENST00000556063 ATAD1Q8NBU5 361 aa8.11□□□□□ -1.11
TDP1-214ENST00000556063 WHAMMQ8TF30 809 aa8.11□□□□□ -1.11
TDP1-214ENST00000556063 ANP32BQ92688 251 aaKnown RBP8.11□□□□□ -1.11
TDP1-214ENST00000556063 MYLPFQ96A32 169 aa8.11□□□□□ -1.11
TDP1-214ENST00000556063 PABPC5Q96DU9 382 aaKnown RBP8.11□□□□□ -1.11
TDP1-214ENST00000556063 CYFIP2Q96F07 1278 aa8.11□□□□□ -1.11
TDP1-214ENST00000556063 SMARCD1Q96GM5 515 aa8.11□□□□□ -1.11
TDP1-214ENST00000556063 PCED1BQ96HM7 432 aa8.11□□□□□ -1.11
TDP1-214ENST00000556063 MRFAP1L1Q96HT8 127 aa8.11□□□□□ -1.11
TDP1-214ENST00000556063 CEP295NLQ96MC4 621 aa8.11□□□□□ -1.11
TDP1-214ENST00000556063 PGLYRP2Q96PD5 576 aa8.11□□□□□ -1.11
TDP1-214ENST00000556063 TMEM209Q96SK2 561 aa8.11□□□□□ -1.11
TDP1-214ENST00000556063 SEPT5Q99719 369 aaPredicted RBP8.11□□□□□ -1.11
TDP1-214ENST00000556063 HNRNPABQ99729 332 aaKnown RBP8.11□□□□□ -1.11
TDP1-214ENST00000556063 NAA15Q9BXJ9 866 aaKnown RBP8.11□□□□□ -1.11
TDP1-214ENST00000556063 PDCL3Q9H2J4 239 aa8.11□□□□□ -1.11
TDP1-214ENST00000556063 DPEP3Q9H4B8 488 aa8.11□□□□□ -1.11
TDP1-214ENST00000556063 SFXN1Q9H9B4 322 aa8.11□□□□□ -1.11
TDP1-214ENST00000556063 CRTAC1Q9NQ79 661 aa8.11□□□□□ -1.11
TDP1-214ENST00000556063 MAN1C1Q9NR34 630 aa8.11□□□□□ -1.11
TDP1-214ENST00000556063 FAM49BQ9NUQ9 324 aa8.11□□□□□ -1.11
TDP1-214ENST00000556063 ZDHHC7Q9NXF8 308 aa8.11□□□□□ -1.11
TDP1-214ENST00000556063 CLDND1Q9NY35 253 aa8.11□□□□□ -1.11
TDP1-214ENST00000556063 EHD2Q9NZN4 543 aa8.11□□□□□ -1.11
TDP1-214ENST00000556063 HMGXB4Q9UGU5 601 aa8.11□□□□□ -1.11
TDP1-214ENST00000556063 FBXW11Q9UKB1 542 aa8.11□□□□□ -1.11
TDP1-214ENST00000556063 LUC7L2Q9Y383 392 aaKnown RBP8.11□□□□□ -1.11
TDP1-214ENST00000556063 RANBP2P49792 3224 aaKnown RBP8.1□□□□□ -1.11
TDP1-214ENST00000556063 ATG2AQ2TAZ0 1938 aa8.1□□□□□ -1.11
TDP1-214ENST00000556063 A0A1W2PQJ5 194 aa8.1□□□□□ -1.11
TDP1-214ENST00000556063 F8VZ95 297 aa8.1□□□□□ -1.11
TDP1-214ENST00000556063 TRIM66O15016 1216 aa8.1□□□□□ -1.11
TDP1-214ENST00000556063 CYP26A1O43174 497 aa8.1□□□□□ -1.11
TDP1-214ENST00000556063 THAP12O43422 761 aa8.1□□□□□ -1.11
TDP1-214ENST00000556063 HCRTO43612 131 aa8.1□□□□□ -1.11
TDP1-214ENST00000556063 ZMYND10O75800 440 aa8.1□□□□□ -1.11
TDP1-214ENST00000556063 NOL4O94818 638 aa8.1□□□□□ -1.11
TDP1-214ENST00000556063 SPATA31D3P0C874 917 aa8.1□□□□□ -1.11
TDP1-214ENST00000556063 FAM200BP0CF97 657 aa8.1□□□□□ -1.11
TDP1-214ENST00000556063 HAPLN1P10915 354 aaPredicted RBP8.1□□□□□ -1.11
TDP1-214ENST00000556063 EPCAMP16422 314 aa8.1□□□□□ -1.11
TDP1-214ENST00000556063 BDNFP23560 247 aa8.1□□□□□ -1.11
TDP1-214ENST00000556063 ADORA2BP29275 332 aa8.1□□□□□ -1.11
TDP1-214ENST00000556063 GNA15P30679 374 aa8.1□□□□□ -1.11
TDP1-214ENST00000556063 HOXA9P31269 272 aa8.1□□□□□ -1.11
TDP1-214ENST00000556063 KRT9P35527 623 aa8.1□□□□□ -1.11
TDP1-214ENST00000556063 GRIK1P39086 918 aa8.1□□□□□ -1.11
TDP1-214ENST00000556063 PBX1P40424 430 aa8.1□□□□□ -1.11
TDP1-214ENST00000556063 PDE6CP51160 858 aa8.1□□□□□ -1.11
TDP1-214ENST00000556063 ZNF75DP51815 510 aa8.1□□□□□ -1.11
TDP1-214ENST00000556063 ZNF132P52740 706 aa8.1□□□□□ -1.11
TDP1-214ENST00000556063 EPHB3P54753 998 aa8.1□□□□□ -1.11
TDP1-214ENST00000556063 ZBED6P86452 979 aa8.1□□□□□ -1.11
TDP1-214ENST00000556063 ORC1Q13415 861 aa8.1□□□□□ -1.11
TDP1-214ENST00000556063 ADAM15Q13444 863 aa8.1□□□□□ -1.11
TDP1-214ENST00000556063 CNGA2Q16280 664 aa8.1□□□□□ -1.11
TDP1-214ENST00000556063 SFMBT2Q5VUG0 894 aa8.1□□□□□ -1.11
TDP1-214ENST00000556063 CES5AQ6NT32 575 aa8.1□□□□□ -1.11
TDP1-214ENST00000556063 DPY19L2P1Q6NXN4 242 aa8.1□□□□□ -1.11
TDP1-214ENST00000556063 SPATA31D4Q6ZUB0 917 aa8.1□□□□□ -1.11
TDP1-214ENST00000556063 FAM35AQ86V20 835 aa8.1□□□□□ -1.11
TDP1-214ENST00000556063 VSTM4Q8IW00 320 aa8.1□□□□□ -1.11
TDP1-214ENST00000556063 SCN4BQ8IWT1 228 aa8.1□□□□□ -1.11
TDP1-214ENST00000556063 DRC7Q8IY82 874 aa8.1□□□□□ -1.11
TDP1-214ENST00000556063 CMASQ8NFW8 434 aaPredicted RBP8.1□□□□□ -1.11
TDP1-214ENST00000556063 SLC7A14Q8TBB6 771 aa8.1□□□□□ -1.11
TDP1-214ENST00000556063 SLC2A14Q8TDB8 520 aa8.1□□□□□ -1.11
TDP1-214ENST00000556063 PPM1EQ8WY54 764 aa8.1□□□□□ -1.11
TDP1-214ENST00000556063 ZNF512Q96ME7 567 aaPredicted RBP8.1□□□□□ -1.11
TDP1-214ENST00000556063 TWNKQ96RR1 684 aa8.1□□□□□ -1.11
TDP1-214ENST00000556063 PKMYT1Q99640 499 aa8.1□□□□□ -1.11
TDP1-214ENST00000556063 PIDD1Q9HB75 910 aa8.1□□□□□ -1.11
TDP1-214ENST00000556063 DMAP1Q9NPF5 467 aaPredicted RBP8.1□□□□□ -1.11
TDP1-214ENST00000556063 TMLHEQ9NVH6 421 aa8.1□□□□□ -1.11
TDP1-214ENST00000556063 ZNHIT6Q9NWK9 470 aaKnown RBP8.1□□□□□ -1.11
TDP1-214ENST00000556063 COG5Q9UP83 839 aa8.1□□□□□ -1.11
TDP1-214ENST00000556063 ASB3Q9Y575 518 aa8.1□□□□□ -1.11
TDP1-214ENST00000556063 CEP83Q9Y592 693 aa8.1□□□□□ -1.11
TDP1-214ENST00000556063 NME7Q9Y5B8 376 aa8.1□□□□□ -1.11
TDP1-214ENST00000556063 INSL5Q9Y5Q6 135 aa8.1□□□□□ -1.11
TDP1-214ENST00000556063 O00370 1275 aa8.09□□□□□ -1.11
TDP1-214ENST00000556063 EPHB6O15197 1021 aa8.09□□□□□ -1.11
TDP1-214ENST00000556063 AP1G2O75843 785 aa8.09□□□□□ -1.11
TDP1-214ENST00000556063 GFPT2O94808 682 aa8.09□□□□□ -1.11
TDP1-214ENST00000556063 POU2F2P09086 479 aa8.09□□□□□ -1.11
TDP1-214ENST00000556063 SETSIPP0DME0 302 aa8.09□□□□□ -1.11
TDP1-214ENST00000556063 CSH1P0DML2 217 aa8.09□□□□□ -1.11
TDP1-214ENST00000556063 CSH2P0DML3 217 aa8.09□□□□□ -1.11
TDP1-214ENST00000556063 CCDC130P13994 396 aa8.09□□□□□ -1.11
TDP1-214ENST00000556063 NPR3P17342 541 aa8.09□□□□□ -1.11
TDP1-214ENST00000556063 CYP2F1P24903 491 aa8.09□□□□□ -1.11
TDP1-214ENST00000556063 BRD2P25440 801 aaKnown RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms