RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 DGLUCYQ7Z3D6 616 aa8.35□□□□□ -1.07
PTCSC3-201ENST00000556013 SPATA2LQ8IUW3 424 aaPredicted RBP8.35□□□□□ -1.07
PTCSC3-201ENST00000556013 WDR49Q8IV35 697 aa8.35□□□□□ -1.07
PTCSC3-201ENST00000556013 C12orf56Q8IXR9 622 aa8.35□□□□□ -1.07
PTCSC3-201ENST00000556013 DCLK2Q8N568 766 aa8.35□□□□□ -1.07
PTCSC3-201ENST00000556013 CAMKK1Q8N5S9 505 aa8.35□□□□□ -1.07
PTCSC3-201ENST00000556013 MAB21L3Q8N8X9 362 aa8.35□□□□□ -1.07
PTCSC3-201ENST00000556013 GIPC2Q8TF65 315 aa8.35□□□□□ -1.07
PTCSC3-201ENST00000556013 SAAL1Q96ER3 474 aa8.35□□□□□ -1.07
PTCSC3-201ENST00000556013 PDE11AQ9HCR9 933 aa8.35□□□□□ -1.07
PTCSC3-201ENST00000556013 TMLHEQ9NVH6 421 aa8.35□□□□□ -1.07
PTCSC3-201ENST00000556013 GTSE1Q9NYZ3 720 aa8.35□□□□□ -1.07
PTCSC3-201ENST00000556013 MAGEC2Q9UBF1 373 aaPredicted RBP8.35□□□□□ -1.07
PTCSC3-201ENST00000556013 SIX4Q9UIU6 781 aa8.35□□□□□ -1.07
PTCSC3-201ENST00000556013 GTF3C4Q9UKN8 822 aa8.35□□□□□ -1.07
PTCSC3-201ENST00000556013 SMG5Q9UPR3 1016 aaKnown RBP8.35□□□□□ -1.07
PTCSC3-201ENST00000556013 SNX9Q9Y5X1 595 aa8.35□□□□□ -1.07
PTCSC3-201ENST00000556013 SLC38A8A6NNN8 435 aa8.34□□□□□ -1.07
PTCSC3-201ENST00000556013 TGFB1I1O43294 461 aa8.34□□□□□ -1.07
PTCSC3-201ENST00000556013 KRT19P08727 400 aa8.34□□□□□ -1.07
PTCSC3-201ENST00000556013 USP17L7P0C7H9 530 aa8.34□□□□□ -1.07
PTCSC3-201ENST00000556013 WARSP23381 471 aaKnown RBP8.34□□□□□ -1.07
PTCSC3-201ENST00000556013 CYP2F1P24903 491 aa8.34□□□□□ -1.07
PTCSC3-201ENST00000556013 ATICP31939 592 aa8.34□□□□□ -1.07
PTCSC3-201ENST00000556013 AP3M2P53677 418 aa8.34□□□□□ -1.07
PTCSC3-201ENST00000556013 WNT7BP56706 349 aa8.34□□□□□ -1.07
PTCSC3-201ENST00000556013 CYP4F8P98187 520 aa8.34□□□□□ -1.07
PTCSC3-201ENST00000556013 SATB1Q01826 763 aa8.34□□□□□ -1.07
PTCSC3-201ENST00000556013 NR1H3Q13133 447 aa8.34□□□□□ -1.07
PTCSC3-201ENST00000556013 BMT2Q1RMZ1 405 aa8.34□□□□□ -1.07
PTCSC3-201ENST00000556013 FAM26FQ5R3K3 315 aa8.34□□□□□ -1.07
PTCSC3-201ENST00000556013 TXNDC11Q6PKC3 985 aa8.34□□□□□ -1.07
PTCSC3-201ENST00000556013 HS2ST1Q7LGA3 356 aa8.34□□□□□ -1.07
PTCSC3-201ENST00000556013 TRAPPC11Q7Z392 1133 aa8.34□□□□□ -1.07
PTCSC3-201ENST00000556013 WDR5BQ86VZ2 330 aa8.34□□□□□ -1.07
PTCSC3-201ENST00000556013 ADGRF2Q8IZF7 708 aa8.34□□□□□ -1.07
PTCSC3-201ENST00000556013 PDILTQ8N807 584 aa8.34□□□□□ -1.07
PTCSC3-201ENST00000556013 ZSWIM2Q8NEG5 633 aa8.34□□□□□ -1.07
PTCSC3-201ENST00000556013 GOLGA5Q8TBA6 731 aa8.34□□□□□ -1.07
PTCSC3-201ENST00000556013 MYCBPAPQ8TBZ2 947 aa8.34□□□□□ -1.07
PTCSC3-201ENST00000556013 USP13Q92995 863 aaPredicted RBP8.34□□□□□ -1.07
PTCSC3-201ENST00000556013 HPDLQ96IR7 371 aa8.34□□□□□ -1.07
PTCSC3-201ENST00000556013 LOXL4Q96JB6 756 aa8.34□□□□□ -1.07
PTCSC3-201ENST00000556013 FNBP1Q96RU3 617 aa8.34□□□□□ -1.07
PTCSC3-201ENST00000556013 RTKNQ9BST9 563 aa8.34□□□□□ -1.07
PTCSC3-201ENST00000556013 PI4K2AQ9BTU6 479 aa8.34□□□□□ -1.07
PTCSC3-201ENST00000556013 IKZF4Q9H2S9 585 aa8.34□□□□□ -1.07
PTCSC3-201ENST00000556013 PCIF1Q9H4Z3 704 aa8.34□□□□□ -1.07
PTCSC3-201ENST00000556013 VRTNQ9H8Y1 702 aa8.34□□□□□ -1.07
PTCSC3-201ENST00000556013 HSPBP1Q9NZL4 362 aa8.34□□□□□ -1.07
PTCSC3-201ENST00000556013 CFAP45Q9UL16 551 aa8.34□□□□□ -1.07
PTCSC3-201ENST00000556013 DNAH14Q0VDD8 3507 aa8.33□□□□□ -1.08
PTCSC3-201ENST00000556013 TRAV19A0A0A6YYK7 116 aa8.33□□□□□ -1.08
PTCSC3-201ENST00000556013 GOLGA8IPA6NC78 632 aa8.33□□□□□ -1.08
PTCSC3-201ENST00000556013 GOLGA8JA6NMD2 632 aa8.33□□□□□ -1.08
PTCSC3-201ENST00000556013 TRIM66O15016 1216 aa8.33□□□□□ -1.08
PTCSC3-201ENST00000556013 HRO43593 1189 aa8.33□□□□□ -1.08
PTCSC3-201ENST00000556013 AKAP3O75969 853 aa8.33□□□□□ -1.08
PTCSC3-201ENST00000556013 PRAMEF12O95522 483 aa8.33□□□□□ -1.08
PTCSC3-201ENST00000556013 CST3P01034 146 aaPredicted RBP8.33□□□□□ -1.08
PTCSC3-201ENST00000556013 MYL1P05976 194 aa8.33□□□□□ -1.08
PTCSC3-201ENST00000556013 ANK1P16157 1881 aa8.33□□□□□ -1.08
PTCSC3-201ENST00000556013 HDCP19113 662 aa8.33□□□□□ -1.08
PTCSC3-201ENST00000556013 HOXD13P35453 343 aa8.33□□□□□ -1.08
PTCSC3-201ENST00000556013 GNL1P36915 607 aaPredicted RBP8.33□□□□□ -1.08
PTCSC3-201ENST00000556013 NOP14P78316 857 aaKnown RBP8.33□□□□□ -1.08
PTCSC3-201ENST00000556013 PSMD2Q13200 908 aa8.33□□□□□ -1.08
PTCSC3-201ENST00000556013 SIM2Q14190 667 aaPredicted RBP8.33□□□□□ -1.08
PTCSC3-201ENST00000556013 PSMD6Q15008 389 aa8.33□□□□□ -1.08
PTCSC3-201ENST00000556013 PON2Q15165 354 aa8.33□□□□□ -1.08
PTCSC3-201ENST00000556013 SNRNP35Q16560 246 aaKnown RBP8.33□□□□□ -1.08
PTCSC3-201ENST00000556013 DDR2Q16832 855 aa8.33□□□□□ -1.08
PTCSC3-201ENST00000556013 RSPO4Q2I0M5 234 aaPredicted RBP8.33□□□□□ -1.08
PTCSC3-201ENST00000556013 TXNDC8Q6A555 127 aa8.33□□□□□ -1.08
PTCSC3-201ENST00000556013 SHC4Q6S5L8 630 aa8.33□□□□□ -1.08
PTCSC3-201ENST00000556013 DENND5BQ6ZUT9 1274 aa8.33□□□□□ -1.08
PTCSC3-201ENST00000556013 OSTM1Q86WC4 334 aa8.33□□□□□ -1.08
PTCSC3-201ENST00000556013 CBWD2Q8IUF1 395 aa8.33□□□□□ -1.08
PTCSC3-201ENST00000556013 XXYLT1Q8NBI6 393 aa8.33□□□□□ -1.08
PTCSC3-201ENST00000556013 OSCP1Q8WVF1 389 aa8.33□□□□□ -1.08
PTCSC3-201ENST00000556013 C8orf48Q96LL4 319 aa8.33□□□□□ -1.08
PTCSC3-201ENST00000556013 TTLL2Q9BWV7 592 aa8.33□□□□□ -1.08
PTCSC3-201ENST00000556013 FGFBP2Q9BYJ0 223 aa8.33□□□□□ -1.08
PTCSC3-201ENST00000556013 MTMR12Q9C0I1 747 aa8.33□□□□□ -1.08
PTCSC3-201ENST00000556013 HPS4Q9NQG7 708 aa8.33□□□□□ -1.08
PTCSC3-201ENST00000556013 AGPAT3Q9NRZ7 376 aa8.33□□□□□ -1.08
PTCSC3-201ENST00000556013 COMMD8Q9NX08 183 aa8.33□□□□□ -1.08
PTCSC3-201ENST00000556013 FAM13BQ9NYF5 915 aa8.33□□□□□ -1.08
PTCSC3-201ENST00000556013 GCNT4Q9P109 453 aa8.33□□□□□ -1.08
PTCSC3-201ENST00000556013 TFIP11Q9UBB9 837 aaKnown RBP8.33□□□□□ -1.08
PTCSC3-201ENST00000556013 RCOR1Q9UKL0 485 aa8.33□□□□□ -1.08
PTCSC3-201ENST00000556013 ARHGAP26Q9UNA1 814 aa8.33□□□□□ -1.08
PTCSC3-201ENST00000556013 MAGED2Q9UNF1 606 aaPredicted RBP8.33□□□□□ -1.08
PTCSC3-201ENST00000556013 CEP250Q9BV73 2442 aa8.33□□□□□ -1.08
PTCSC3-201ENST00000556013 PATJQ8NI35 1801 aa8.33□□□□□ -1.08
PTCSC3-201ENST00000556013 CACNA1AO00555 2505 aa8.32□□□□□ -1.08
PTCSC3-201ENST00000556013 POLR2DO15514 142 aaKnown RBP8.32□□□□□ -1.08
PTCSC3-201ENST00000556013 TNNI1P19237 187 aa8.32□□□□□ -1.08
PTCSC3-201ENST00000556013 LMO2P25791 158 aa8.32□□□□□ -1.08
PTCSC3-201ENST00000556013 GJA4P35212 333 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms