RNA–Protein interactions for RNA: ENST00000556009.5

NPC2-208, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 5

Gene NPC2, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-208ENST00000556009 BFSP1Q12934 665 aa19.01■□□□□ 0.63
NPC2-208ENST00000556009 SURF1Q15526 300 aa19.01■□□□□ 0.63
NPC2-208ENST00000556009 DDR2Q16832 855 aa19.01■□□□□ 0.63
NPC2-208ENST00000556009 TMEM196Q5HYL7 178 aa19.01■□□□□ 0.63
NPC2-208ENST00000556009 TXNDC8Q6A555 127 aa19.01■□□□□ 0.63
NPC2-208ENST00000556009 FAM171BQ6P995 826 aa19.01■□□□□ 0.63
NPC2-208ENST00000556009 GPD1LQ8N335 351 aa19.01■□□□□ 0.63
NPC2-208ENST00000556009 FUBP3Q96I24 572 aaKnown RBP eCLIP19.01■□□□□ 0.63
NPC2-208ENST00000556009 LRRC27Q9C0I9 530 aa19.01■□□□□ 0.63
NPC2-208ENST00000556009 PCIF1Q9H4Z3 704 aa19.01■□□□□ 0.63
NPC2-208ENST00000556009 GTF3C4Q9UKN8 822 aa19.01■□□□□ 0.63
NPC2-208ENST00000556009 CDV3Q9UKY7 258 aaKnown RBP19.01■□□□□ 0.63
NPC2-208ENST00000556009 SNX9Q9Y5X1 595 aa19.01■□□□□ 0.63
NPC2-208ENST00000556009 TPRP12270 2363 aaKnown RBP19■□□□□ 0.63
NPC2-208ENST00000556009 PTPRDP23468 1912 aa19■□□□□ 0.63
NPC2-208ENST00000556009 CCDC163A0A0D9SF12 145 aa19■□□□□ 0.63
NPC2-208ENST00000556009 PRPF6O94906 941 aaKnown RBP19■□□□□ 0.63
NPC2-208ENST00000556009 ACAT1P24752 427 aaKnown RBP19■□□□□ 0.63
NPC2-208ENST00000556009 PCSK1P29120 753 aa19■□□□□ 0.63
NPC2-208ENST00000556009 PDGFRLQ15198 375 aa19■□□□□ 0.63
NPC2-208ENST00000556009 SOWAHAQ2M3V2 549 aa19■□□□□ 0.63
NPC2-208ENST00000556009 PRR23BQ6ZRT6 265 aa19■□□□□ 0.63
NPC2-208ENST00000556009 STXBP4Q6ZWJ1 553 aa19■□□□□ 0.63
NPC2-208ENST00000556009 WDR5BQ86VZ2 330 aa19■□□□□ 0.63
NPC2-208ENST00000556009 INTS13Q9NVM9 706 aa19■□□□□ 0.63
NPC2-208ENST00000556009 KBTBD4Q9NVX7 518 aa19■□□□□ 0.63
NPC2-208ENST00000556009 MAGED2Q9UNF1 606 aaPredicted RBP19■□□□□ 0.63
NPC2-208ENST00000556009 OTOL1A6NHN0 477 aaPredicted RBP18.99■□□□□ 0.63
NPC2-208ENST00000556009 ZNF233A6NK53 670 aa18.99■□□□□ 0.63
NPC2-208ENST00000556009 FOXD2O60548 495 aaPredicted RBP18.99■□□□□ 0.63
NPC2-208ENST00000556009 ATG13O75143 517 aa18.99■□□□□ 0.63
NPC2-208ENST00000556009 KRT19P08727 400 aa18.99■□□□□ 0.63
NPC2-208ENST00000556009 TMEM191BP0C7N4 346 aa18.99■□□□□ 0.63
NPC2-208ENST00000556009 MAGEA11P43364 429 aa18.99■□□□□ 0.63
NPC2-208ENST00000556009 GRSF1Q12849 480 aaKnown RBP eCLIP18.99■□□□□ 0.63
NPC2-208ENST00000556009 MYO1EQ12965 1108 aa18.99■□□□□ 0.63
NPC2-208ENST00000556009 SRSF5Q13243 272 aaKnown RBP18.99■□□□□ 0.63
NPC2-208ENST00000556009 DUOXA2Q1HG44 320 aa18.99■□□□□ 0.63
NPC2-208ENST00000556009 SDHAF4Q5VUM1 108 aa18.99■□□□□ 0.63
NPC2-208ENST00000556009 FSTL4Q6MZW2 842 aa18.99■□□□□ 0.63
NPC2-208ENST00000556009 CC2D1AQ6P1N0 951 aaPredicted RBP18.99■□□□□ 0.63
NPC2-208ENST00000556009 OSTM1Q86WC4 334 aa18.99■□□□□ 0.63
NPC2-208ENST00000556009 ADGRF2Q8IZF7 708 aa18.99■□□□□ 0.63
NPC2-208ENST00000556009 LINC00301Q8NCQ3 95 aa18.99■□□□□ 0.63
NPC2-208ENST00000556009 CHFRQ96EP1 664 aa18.99■□□□□ 0.63
NPC2-208ENST00000556009 ANKRD36BP1Q96IX9 119 aa18.99■□□□□ 0.63
NPC2-208ENST00000556009 CEP295NLQ96MC4 621 aa18.99■□□□□ 0.63
NPC2-208ENST00000556009 MTMR12Q9C0I1 747 aa18.99■□□□□ 0.63
NPC2-208ENST00000556009 TNMDQ9H2S6 317 aa18.99■□□□□ 0.63
NPC2-208ENST00000556009 CUEDC2Q9H467 287 aa18.99■□□□□ 0.63
NPC2-208ENST00000556009 EBF3Q9H4W6 596 aa18.99■□□□□ 0.63
NPC2-208ENST00000556009 KIAA1586Q9HCI6 787 aa18.99■□□□□ 0.63
NPC2-208ENST00000556009 R3HCC1Q9Y3T6 440 aaKnown RBP18.99■□□□□ 0.63
NPC2-208ENST00000556009 TULP1O00294 542 aaPredicted RBP18.98■□□□□ 0.63
NPC2-208ENST00000556009 STX6O43752 255 aa18.98■□□□□ 0.63
NPC2-208ENST00000556009 TADA3O75528 432 aa18.98■□□□□ 0.63
NPC2-208ENST00000556009 FAM160A1Q05DH4 1040 aa18.98■□□□□ 0.63
NPC2-208ENST00000556009 E2F4Q16254 413 aa18.98■□□□□ 0.63
NPC2-208ENST00000556009 CSRP2Q16527 193 aa18.98■□□□□ 0.63
NPC2-208ENST00000556009 HEATR6Q6AI08 1181 aaKnown RBP18.98■□□□□ 0.63
NPC2-208ENST00000556009 TRIM68Q6AZZ1 485 aa18.98■□□□□ 0.63
NPC2-208ENST00000556009 CNNM4Q6P4Q7 775 aa18.98■□□□□ 0.63
NPC2-208ENST00000556009 SPATA2LQ8IUW3 424 aaPredicted RBP18.98■□□□□ 0.63
NPC2-208ENST00000556009 PDILTQ8N807 584 aa18.98■□□□□ 0.63
NPC2-208ENST00000556009 STKLD1Q8NE28 680 aa18.98■□□□□ 0.63
NPC2-208ENST00000556009 RIN3Q8TB24 985 aa18.98■□□□□ 0.63
NPC2-208ENST00000556009 HPDLQ96IR7 371 aa18.98■□□□□ 0.63
NPC2-208ENST00000556009 FAM84AQ96KN4 292 aa18.98■□□□□ 0.63
NPC2-208ENST00000556009 SEMA4GQ9NTN9 838 aa18.98■□□□□ 0.63
NPC2-208ENST00000556009 SDK1Q7Z5N4 2213 aa18.97■□□□□ 0.63
NPC2-208ENST00000556009 PPP6R2O75170 966 aa18.97■□□□□ 0.63
NPC2-208ENST00000556009 TNNC2P02585 160 aa18.97■□□□□ 0.63
NPC2-208ENST00000556009 FAM163BP0C2L3 166 aa18.97■□□□□ 0.63
NPC2-208ENST00000556009 DRD1P21728 446 aa18.97■□□□□ 0.63
NPC2-208ENST00000556009 HOXD13P35453 343 aa18.97■□□□□ 0.63
NPC2-208ENST00000556009 AMPD3Q01432 767 aa18.97■□□□□ 0.63
NPC2-208ENST00000556009 MAPRE1Q15691 268 aaKnown RBP18.97■□□□□ 0.63
NPC2-208ENST00000556009 VSTM1Q6UX27 236 aa18.97■□□□□ 0.63
NPC2-208ENST00000556009 C4orf50Q6ZRC1 276 aa18.97■□□□□ 0.63
NPC2-208ENST00000556009 OR5B17Q8NGF7 314 aa18.97■□□□□ 0.63
NPC2-208ENST00000556009 ZNF507Q8TCN5 953 aa18.97■□□□□ 0.63
NPC2-208ENST00000556009 NETO1Q8TDF5 533 aa18.97■□□□□ 0.63
NPC2-208ENST00000556009 KBTBD7Q8WVZ9 684 aa18.97■□□□□ 0.63
NPC2-208ENST00000556009 EXOC4Q96A65 974 aa18.97■□□□□ 0.63
NPC2-208ENST00000556009 SPATA17Q96L03 361 aa18.97■□□□□ 0.63
NPC2-208ENST00000556009 TRIM9Q9C026 710 aa18.97■□□□□ 0.63
NPC2-208ENST00000556009 CDH9Q9ULB4 789 aa18.97■□□□□ 0.63
NPC2-208ENST00000556009 EIF3DO15371 548 aaKnown RBP eCLIP18.96■□□□□ 0.63
NPC2-208ENST00000556009 USP17L7P0C7H9 530 aa18.96■□□□□ 0.63
NPC2-208ENST00000556009 ARSAP15289 507 aa18.96■□□□□ 0.63
NPC2-208ENST00000556009 TCF3P15923 654 aa18.96■□□□□ 0.63
NPC2-208ENST00000556009 GALK1P51570 392 aa18.96■□□□□ 0.63
NPC2-208ENST00000556009 MTF1Q14872 753 aa18.96■□□□□ 0.63
NPC2-208ENST00000556009 STK38Q15208 465 aa18.96■□□□□ 0.63
NPC2-208ENST00000556009 ZNF77Q15935 545 aa18.96■□□□□ 0.63
NPC2-208ENST00000556009 FBXO43Q4G163 708 aa18.96■□□□□ 0.63
NPC2-208ENST00000556009 PKN3Q6P5Z2 889 aa18.96■□□□□ 0.63
NPC2-208ENST00000556009 CEP68Q76N32 757 aa18.96■□□□□ 0.63
NPC2-208ENST00000556009 EPM2AIP1Q7L775 607 aaPredicted RBP18.96■□□□□ 0.63
NPC2-208ENST00000556009 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms