RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 ZNF233A6NK53 670 aa21.16■□□□□ 0.98
PRKCH-219ENST00000555906 CUTAO60888 179 aa21.16■□□□□ 0.98
PRKCH-219ENST00000555906 CYP2F1P24903 491 aa21.16■□□□□ 0.98
PRKCH-219ENST00000555906 ASIC1P78348 528 aa21.16■□□□□ 0.98
PRKCH-219ENST00000555906 ZNF268Q14587 947 aaPredicted RBP21.16■□□□□ 0.98
PRKCH-219ENST00000555906 SOWAHAQ2M3V2 549 aa21.16■□□□□ 0.98
PRKCH-219ENST00000555906 LMBRD2Q68DH5 695 aaPredicted RBP21.16■□□□□ 0.98
PRKCH-219ENST00000555906 EPM2AIP1Q7L775 607 aaPredicted RBP21.16■□□□□ 0.98
PRKCH-219ENST00000555906 DPH6Q7L8W6 267 aa21.16■□□□□ 0.98
PRKCH-219ENST00000555906 DGLUCYQ7Z3D6 616 aa21.16■□□□□ 0.98
PRKCH-219ENST00000555906 LIMS2Q7Z4I7 341 aa21.16■□□□□ 0.98
PRKCH-219ENST00000555906 MON1AQ86VX9 555 aa21.16■□□□□ 0.98
PRKCH-219ENST00000555906 WDR49Q8IV35 697 aa21.16■□□□□ 0.98
PRKCH-219ENST00000555906 OR5B17Q8NGF7 314 aa21.16■□□□□ 0.98
PRKCH-219ENST00000555906 USP13Q92995 863 aaPredicted RBP21.16■□□□□ 0.98
PRKCH-219ENST00000555906 DHX58Q96C10 678 aa21.16■□□□□ 0.98
PRKCH-219ENST00000555906 MYRFLQ96LU7 910 aa21.16■□□□□ 0.98
PRKCH-219ENST00000555906 FAM83CQ9BQN1 747 aa21.16■□□□□ 0.98
PRKCH-219ENST00000555906 MAGEF1Q9HAY2 307 aa21.16■□□□□ 0.98
PRKCH-219ENST00000555906 KIAA1586Q9HCI6 787 aa21.16■□□□□ 0.98
PRKCH-219ENST00000555906 TDP1Q9NUW8 608 aa21.16■□□□□ 0.98
PRKCH-219ENST00000555906 GTF3C4Q9UKN8 822 aa21.16■□□□□ 0.98
PRKCH-219ENST00000555906 MAGED2Q9UNF1 606 aaPredicted RBP21.16■□□□□ 0.98
PRKCH-219ENST00000555906 R3HCC1Q9Y3T6 440 aaKnown RBP21.16■□□□□ 0.98
PRKCH-219ENST00000555906 MYO16Q9Y6X6 1858 aa21.15■□□□□ 0.98
PRKCH-219ENST00000555906 K7ESF4 209 aa21.15■□□□□ 0.98
PRKCH-219ENST00000555906 HOXD13P35453 343 aa21.15■□□□□ 0.98
PRKCH-219ENST00000555906 DDR2Q16832 855 aa21.15■□□□□ 0.98
PRKCH-219ENST00000555906 CCDC142Q17RM4 750 aa21.15■□□□□ 0.98
PRKCH-219ENST00000555906 FAM26FQ5R3K3 315 aa21.15■□□□□ 0.98
PRKCH-219ENST00000555906 SDHAF4Q5VUM1 108 aa21.15■□□□□ 0.98
PRKCH-219ENST00000555906 TXNDC8Q6A555 127 aa21.15■□□□□ 0.98
PRKCH-219ENST00000555906 LAIR1Q6GTX8 287 aa21.15■□□□□ 0.98
PRKCH-219ENST00000555906 SPATA2LQ8IUW3 424 aaPredicted RBP21.15■□□□□ 0.98
PRKCH-219ENST00000555906 IQUBQ8NA54 791 aa21.15■□□□□ 0.98
PRKCH-219ENST00000555906 KBTBD7Q8WVZ9 684 aa21.15■□□□□ 0.98
PRKCH-219ENST00000555906 HPDLQ96IR7 371 aa21.15■□□□□ 0.98
PRKCH-219ENST00000555906 HPS4Q9NQG7 708 aa21.15■□□□□ 0.98
PRKCH-219ENST00000555906 SPAG17Q6Q759 2223 aa21.14■□□□□ 0.98
PRKCH-219ENST00000555906 HCRTO43612 131 aa21.14■□□□□ 0.97
PRKCH-219ENST00000555906 MAGEA11P43364 429 aa21.14■□□□□ 0.97
PRKCH-219ENST00000555906 LMNB2Q03252 620 aa21.14■□□□□ 0.97
PRKCH-219ENST00000555906 RUNX3Q13761 415 aa21.14■□□□□ 0.97
PRKCH-219ENST00000555906 DUOXA2Q1HG44 320 aa21.14■□□□□ 0.97
PRKCH-219ENST00000555906 FAM171BQ6P995 826 aa21.14■□□□□ 0.97
PRKCH-219ENST00000555906 SHC4Q6S5L8 630 aa21.14■□□□□ 0.97
PRKCH-219ENST00000555906 C4orf50Q6ZRC1 276 aa21.14■□□□□ 0.97
PRKCH-219ENST00000555906 ZNF507Q8TCN5 953 aa21.14■□□□□ 0.97
PRKCH-219ENST00000555906 SYT15Q9BQS2 421 aa21.14■□□□□ 0.97
PRKCH-219ENST00000555906 AGPAT3Q9NRZ7 376 aa21.14■□□□□ 0.97
PRKCH-219ENST00000555906 GKN1Q9NS71 199 aa21.14■□□□□ 0.97
PRKCH-219ENST00000555906 RALGAPA1Q6GYQ0 2036 aa21.14■□□□□ 0.97
PRKCH-219ENST00000555906 SDHBP21912 280 aa21.13■□□□□ 0.97
PRKCH-219ENST00000555906 HOXA6P31267 233 aa21.13■□□□□ 0.97
PRKCH-219ENST00000555906 CNR2P34972 360 aa21.13■□□□□ 0.97
PRKCH-219ENST00000555906 SNRNP35Q16560 246 aaKnown RBP21.13■□□□□ 0.97
PRKCH-219ENST00000555906 RSPO4Q2I0M5 234 aaPredicted RBP21.13■□□□□ 0.97
PRKCH-219ENST00000555906 LONP2Q86WA8 852 aa21.13■□□□□ 0.97
PRKCH-219ENST00000555906 RIN3Q8TB24 985 aa21.13■□□□□ 0.97
PRKCH-219ENST00000555906 SNX21Q969T3 373 aa21.13■□□□□ 0.97
PRKCH-219ENST00000555906 C7orf25Q9BPX7 421 aa21.13■□□□□ 0.97
PRKCH-219ENST00000555906 TFIP11Q9UBB9 837 aaKnown RBP21.13■□□□□ 0.97
PRKCH-219ENST00000555906 CDH9Q9ULB4 789 aa21.13■□□□□ 0.97
PRKCH-219ENST00000555906 NCOR2Q9Y618 2525 aa21.13■□□□□ 0.97
PRKCH-219ENST00000555906 CHURC1-FNTBB4DL54 471 aa21.12■□□□□ 0.97
PRKCH-219ENST00000555906 TGFB1I1O43294 461 aa21.12■□□□□ 0.97
PRKCH-219ENST00000555906 PDIA4P13667 645 aaKnown RBP21.12■□□□□ 0.97
PRKCH-219ENST00000555906 WARSP23381 471 aaKnown RBP21.12■□□□□ 0.97
PRKCH-219ENST00000555906 FNTBP49356 437 aa21.12■□□□□ 0.97
PRKCH-219ENST00000555906 SNRPFP62306 86 aaKnown RBP21.12■□□□□ 0.97
PRKCH-219ENST00000555906 FAM160A1Q05DH4 1040 aa21.12■□□□□ 0.97
PRKCH-219ENST00000555906 EHHADHQ08426 723 aa21.12■□□□□ 0.97
PRKCH-219ENST00000555906 DMWDQ09019 674 aa21.12■□□□□ 0.97
PRKCH-219ENST00000555906 USP4Q13107 963 aa21.12■□□□□ 0.97
PRKCH-219ENST00000555906 PDGFRLQ15198 375 aa21.12■□□□□ 0.97
PRKCH-219ENST00000555906 MAPRE1Q15691 268 aaKnown RBP21.12■□□□□ 0.97
PRKCH-219ENST00000555906 TMEM196Q5HYL7 178 aa21.12■□□□□ 0.97
PRKCH-219ENST00000555906 TRIM68Q6AZZ1 485 aa21.12■□□□□ 0.97
PRKCH-219ENST00000555906 CC2D1AQ6P1N0 951 aaPredicted RBP21.12■□□□□ 0.97
PRKCH-219ENST00000555906 UNC13DQ70J99 1090 aa21.12■□□□□ 0.97
PRKCH-219ENST00000555906 MYLPFQ96A32 169 aa21.12■□□□□ 0.97
PRKCH-219ENST00000555906 CHFRQ96EP1 664 aa21.12■□□□□ 0.97
PRKCH-219ENST00000555906 CEP295NLQ96MC4 621 aa21.12■□□□□ 0.97
PRKCH-219ENST00000555906 EBF3Q9H4W6 596 aa21.12■□□□□ 0.97
PRKCH-219ENST00000555906 USP18Q9UMW8 372 aa21.12■□□□□ 0.97
PRKCH-219ENST00000555906 EML5Q05BV3 1969 aa21.11■□□□□ 0.97
PRKCH-219ENST00000555906 TRAV19A0A0A6YYK7 116 aa21.11■□□□□ 0.97
PRKCH-219ENST00000555906 PRR5-ARHGAP8B1AHC4 643 aa21.11■□□□□ 0.97
PRKCH-219ENST00000555906 LRP3O75074 770 aa21.11■□□□□ 0.97
PRKCH-219ENST00000555906 TGM1P22735 817 aa21.11■□□□□ 0.97
PRKCH-219ENST00000555906 PSMC1P62191 440 aaKnown RBP21.11■□□□□ 0.97
PRKCH-219ENST00000555906 ARHGAP8P85298 464 aa21.11■□□□□ 0.97
PRKCH-219ENST00000555906 AMPD2Q01433 879 aa21.11■□□□□ 0.97
PRKCH-219ENST00000555906 GRSF1Q12849 480 aaKnown RBP eCLIP21.11■□□□□ 0.97
PRKCH-219ENST00000555906 SIM2Q14190 667 aaPredicted RBP21.11■□□□□ 0.97
PRKCH-219ENST00000555906 MTF1Q14872 753 aa21.11■□□□□ 0.97
PRKCH-219ENST00000555906 PSMD6Q15008 389 aa21.11■□□□□ 0.97
PRKCH-219ENST00000555906 ZNF77Q15935 545 aa21.11■□□□□ 0.97
PRKCH-219ENST00000555906 LPAL2Q16609 132 aa21.11■□□□□ 0.97
PRKCH-219ENST00000555906 VSTM1Q6UX27 236 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms