RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 TMCO2Q7Z6W1 182 aaPredicted RBP10.23□□□□□ -0.77
HNRNPC-220ENST00000555585 PHLDB2Q86SQ0 1253 aa10.23□□□□□ -0.77
HNRNPC-220ENST00000555585 PHF13Q86YI8 300 aaPredicted RBP10.23□□□□□ -0.77
HNRNPC-220ENST00000555585 RHOT2Q8IXI1 618 aa10.23□□□□□ -0.77
HNRNPC-220ENST00000555585 WDTC1Q8N5D0 677 aa10.23□□□□□ -0.77
HNRNPC-220ENST00000555585 B3GALNT2Q8NCR0 500 aa10.23□□□□□ -0.77
HNRNPC-220ENST00000555585 TRIM58Q8NG06 486 aa10.23□□□□□ -0.77
HNRNPC-220ENST00000555585 SLC35G2Q8TBE7 412 aa10.23□□□□□ -0.77
HNRNPC-220ENST00000555585 SPATA18Q8TC71 538 aa10.23□□□□□ -0.77
HNRNPC-220ENST00000555585 DPF3Q92784 378 aa10.23□□□□□ -0.77
HNRNPC-220ENST00000555585 WDR24Q96S15 920 aa10.23□□□□□ -0.77
HNRNPC-220ENST00000555585 SYNCQ9H7C4 482 aa10.23□□□□□ -0.77
HNRNPC-220ENST00000555585 GTF3C4Q9UKN8 822 aa10.23□□□□□ -0.77
HNRNPC-220ENST00000555585 ADAM28Q9UKQ2 775 aa10.23□□□□□ -0.77
HNRNPC-220ENST00000555585 CDH9Q9ULB4 789 aa10.23□□□□□ -0.77
HNRNPC-220ENST00000555585 ZMYND8Q9ULU4 1186 aaPredicted RBP10.23□□□□□ -0.77
HNRNPC-220ENST00000555585 CTAGE9A4FU28 777 aa10.22□□□□□ -0.77
HNRNPC-220ENST00000555585 PALMO75781 387 aa10.22□□□□□ -0.77
HNRNPC-220ENST00000555585 CYP1A2P05177 515 aa10.22□□□□□ -0.77
HNRNPC-220ENST00000555585 CALB1P05937 261 aa10.22□□□□□ -0.77
HNRNPC-220ENST00000555585 GALTP07902 379 aa10.22□□□□□ -0.77
HNRNPC-220ENST00000555585 TKTP29401 623 aaKnown RBP10.22□□□□□ -0.77
HNRNPC-220ENST00000555585 PBX3P40426 434 aa10.22□□□□□ -0.77
HNRNPC-220ENST00000555585 ALDH7A1P49419 539 aaKnown RBP10.22□□□□□ -0.77
HNRNPC-220ENST00000555585 YWHAHQ04917 246 aaPredicted RBP10.22□□□□□ -0.77
HNRNPC-220ENST00000555585 BTG3Q14201 252 aaPredicted RBP10.22□□□□□ -0.77
HNRNPC-220ENST00000555585 C2CD6Q53TS8 623 aa10.22□□□□□ -0.77
HNRNPC-220ENST00000555585 FAM171A1Q5VUB5 890 aa10.22□□□□□ -0.77
HNRNPC-220ENST00000555585 PSRC1Q6PGN9 363 aaPredicted RBP10.22□□□□□ -0.77
HNRNPC-220ENST00000555585 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.22□□□□□ -0.77
HNRNPC-220ENST00000555585 C16orf59Q7L2K0 433 aa10.22□□□□□ -0.77
HNRNPC-220ENST00000555585 CEP57Q86XR8 500 aa10.22□□□□□ -0.77
HNRNPC-220ENST00000555585 SLC2A14Q8TDB8 520 aa10.22□□□□□ -0.77
HNRNPC-220ENST00000555585 ZNF689Q96CS4 500 aaPredicted RBP10.22□□□□□ -0.77
HNRNPC-220ENST00000555585 VCPIP1Q96JH7 1222 aa10.22□□□□□ -0.77
HNRNPC-220ENST00000555585 YME1L1Q96TA2 773 aa10.22□□□□□ -0.77
HNRNPC-220ENST00000555585 NAPGQ99747 312 aaPredicted RBP10.22□□□□□ -0.77
HNRNPC-220ENST00000555585 LBHD1Q9BQE6 289 aaPredicted RBP10.22□□□□□ -0.77
HNRNPC-220ENST00000555585 NUP85Q9BW27 656 aa10.22□□□□□ -0.77
HNRNPC-220ENST00000555585 CWH43Q9H720 699 aa10.22□□□□□ -0.77
HNRNPC-220ENST00000555585 OSGEPQ9NPF4 335 aa10.22□□□□□ -0.77
HNRNPC-220ENST00000555585 ST7Q9NRC1 585 aa10.22□□□□□ -0.77
HNRNPC-220ENST00000555585 MARCH5Q9NX47 278 aa10.22□□□□□ -0.77
HNRNPC-220ENST00000555585 CHORDC1Q9UHD1 332 aaPredicted RBP10.22□□□□□ -0.77
HNRNPC-220ENST00000555585 CAPN6Q9Y6Q1 641 aa10.22□□□□□ -0.77
HNRNPC-220ENST00000555585 PTPRSQ13332 1948 aa10.21□□□□□ -0.77
HNRNPC-220ENST00000555585 MYH10P35580 1976 aa10.21□□□□□ -0.77
HNRNPC-220ENST00000555585 CCDC85CA6NKD9 419 aa10.21□□□□□ -0.77
HNRNPC-220ENST00000555585 TMEM110-MUSTN1A8MSY1 372 aa10.21□□□□□ -0.77
HNRNPC-220ENST00000555585 CLDN5O00501 218 aa10.21□□□□□ -0.77
HNRNPC-220ENST00000555585 SYN3O14994 580 aa10.21□□□□□ -0.77
HNRNPC-220ENST00000555585 URI1O94763 535 aaPredicted RBP10.21□□□□□ -0.77
HNRNPC-220ENST00000555585 SETSIPP0DME0 302 aa10.21□□□□□ -0.77
HNRNPC-220ENST00000555585 MMP8P22894 467 aa10.21□□□□□ -0.77
HNRNPC-220ENST00000555585 RRM1P23921 792 aa10.21□□□□□ -0.77
HNRNPC-220ENST00000555585 GPD2P43304 727 aa10.21□□□□□ -0.77
HNRNPC-220ENST00000555585 RGS7P49802 495 aa10.21□□□□□ -0.77
HNRNPC-220ENST00000555585 BCAT1P54687 386 aa10.21□□□□□ -0.77
HNRNPC-220ENST00000555585 SLC8A3P57103 927 aa10.21□□□□□ -0.77
HNRNPC-220ENST00000555585 TSPY1Q01534 308 aa10.21□□□□□ -0.77
HNRNPC-220ENST00000555585 PDE4CQ08493 712 aa10.21□□□□□ -0.77
HNRNPC-220ENST00000555585 BST2Q10589 180 aaKnown RBP10.21□□□□□ -0.77
HNRNPC-220ENST00000555585 ELAVL2Q12926 359 aaKnown RBP10.21□□□□□ -0.77
HNRNPC-220ENST00000555585 PTP4A2Q12974 167 aa10.21□□□□□ -0.77
HNRNPC-220ENST00000555585 PDCLQ13371 301 aa10.21□□□□□ -0.77
HNRNPC-220ENST00000555585 INTS6LQ5JSJ4 861 aaKnown RBP10.21□□□□□ -0.77
HNRNPC-220ENST00000555585 TMEM240Q5SV17 173 aa10.21□□□□□ -0.77
HNRNPC-220ENST00000555585 CYP4A22Q5TCH4 519 aa10.21□□□□□ -0.77
HNRNPC-220ENST00000555585 KIAA0319Q5VV43 1072 aa10.21□□□□□ -0.77
HNRNPC-220ENST00000555585 LLGL2Q6P1M3 1020 aa10.21□□□□□ -0.77
HNRNPC-220ENST00000555585 FUT10Q6P4F1 479 aa10.21□□□□□ -0.77
HNRNPC-220ENST00000555585 TTC30AQ86WT1 665 aa10.21□□□□□ -0.77
HNRNPC-220ENST00000555585 CMTR2Q8IYT2 770 aaKnown RBP10.21□□□□□ -0.77
HNRNPC-220ENST00000555585 ANKRD52Q8NB46 1076 aa10.21□□□□□ -0.77
HNRNPC-220ENST00000555585 TPCN2Q8NHX9 752 aa10.21□□□□□ -0.77
HNRNPC-220ENST00000555585 ZNF564Q8TBZ8 553 aaPredicted RBP10.21□□□□□ -0.77
HNRNPC-220ENST00000555585 IPO4Q8TEX9 1081 aaKnown RBP10.21□□□□□ -0.77
HNRNPC-220ENST00000555585 C18orf8Q96DM3 657 aa10.21□□□□□ -0.77
HNRNPC-220ENST00000555585 ABHD8Q96I13 439 aa10.21□□□□□ -0.77
HNRNPC-220ENST00000555585 CALR3Q96L12 384 aaKnown RBP10.21□□□□□ -0.77
HNRNPC-220ENST00000555585 ZNF558Q96NG5 402 aa10.21□□□□□ -0.77
HNRNPC-220ENST00000555585 HNRNPABQ99729 332 aaKnown RBP10.21□□□□□ -0.77
HNRNPC-220ENST00000555585 RTP3Q9BQQ7 232 aa10.21□□□□□ -0.77
HNRNPC-220ENST00000555585 ACBD6Q9BR61 282 aa10.21□□□□□ -0.77
HNRNPC-220ENST00000555585 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.21□□□□□ -0.772e-11■■■□□ 15
HNRNPC-220ENST00000555585 ZBED2Q9BTP6 218 aa10.21□□□□□ -0.77
HNRNPC-220ENST00000555585 GPR62Q9BZJ7 368 aa10.21□□□□□ -0.77
HNRNPC-220ENST00000555585 MRPL47Q9HD33 250 aaKnown RBP10.21□□□□□ -0.77
HNRNPC-220ENST00000555585 CRTAC1Q9NQ79 661 aa10.21□□□□□ -0.77
HNRNPC-220ENST00000555585 AVENQ9NQS1 362 aaPredicted RBP10.21□□□□□ -0.77
HNRNPC-220ENST00000555585 UVRAGQ9P2Y5 699 aa10.21□□□□□ -0.77
HNRNPC-220ENST00000555585 CYTH4Q9UIA0 394 aa10.21□□□□□ -0.77
HNRNPC-220ENST00000555585 STRIP2Q9ULQ0 834 aa10.21□□□□□ -0.77
HNRNPC-220ENST00000555585 SCINQ9Y6U3 715 aa10.21□□□□□ -0.77
HNRNPC-220ENST00000555585 SF3B1O75533 1304 aaKnown RBP eCLIP10.21□□□□□ -0.785e-6■■■■■ 39
HNRNPC-220ENST00000555585 MYBPHLA2RUH7 354 aa10.2□□□□□ -0.78
HNRNPC-220ENST00000555585 GRID2IPA4D2P6 1211 aa10.2□□□□□ -0.78
HNRNPC-220ENST00000555585 GOLGA8SH3BPF8 625 aa10.2□□□□□ -0.78
HNRNPC-220ENST00000555585 PIK3R2O00459 728 aa10.2□□□□□ -0.78
HNRNPC-220ENST00000555585 ENC1O14682 589 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms