RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 ZNF75DP51815 510 aa15.17■□□□□ 0.02
CHD8-208ENST00000555301 DUSP4Q13115 394 aa15.17■□□□□ 0.02
CHD8-208ENST00000555301 TRIM14Q14142 442 aa15.17■□□□□ 0.02
CHD8-208ENST00000555301 COL19A1Q14993 1142 aa15.17■□□□□ 0.02
CHD8-208ENST00000555301 CTC1Q2NKJ3 1217 aa15.17■□□□□ 0.02
CHD8-208ENST00000555301 MGAT5BQ3V5L5 792 aa15.17■□□□□ 0.02
CHD8-208ENST00000555301 ARHGAP17Q68EM7 881 aa15.17■□□□□ 0.02
CHD8-208ENST00000555301 VSTM1Q6UX27 236 aa15.17■□□□□ 0.02
CHD8-208ENST00000555301 SPATA31D4Q6ZUB0 917 aa15.17■□□□□ 0.02
CHD8-208ENST00000555301 ZNF397Q8NF99 534 aaPredicted RBP15.17■□□□□ 0.02
CHD8-208ENST00000555301 SLC2A14Q8TDB8 520 aa15.17■□□□□ 0.02
CHD8-208ENST00000555301 PABPC5Q96DU9 382 aaKnown RBP15.17■□□□□ 0.02
CHD8-208ENST00000555301 HNRNPABQ99729 332 aaKnown RBP15.17■□□□□ 0.02
CHD8-208ENST00000555301 MED10Q9BTT4 135 aa15.17■□□□□ 0.02
CHD8-208ENST00000555301 B3GNT5Q9BYG0 378 aa15.17■□□□□ 0.02
CHD8-208ENST00000555301 TTYH3Q9C0H2 523 aa15.17■□□□□ 0.02
CHD8-208ENST00000555301 FAM49BQ9NUQ9 324 aa15.17■□□□□ 0.02
CHD8-208ENST00000555301 ZDHHC7Q9NXF8 308 aa15.17■□□□□ 0.02
CHD8-208ENST00000555301 SZT2Q5T011 3432 aa15.17■□□□□ 0.02
CHD8-208ENST00000555301 VWA8A3KMH1 1905 aa15.17■□□□□ 0.02
CHD8-208ENST00000555301 TSC2P49815 1807 aa15.17■□□□□ 0.02
CHD8-208ENST00000555301 CYP26A1O43174 497 aa15.16■□□□□ 0.02
CHD8-208ENST00000555301 MED7O43513 233 aa15.16■□□□□ 0.02
CHD8-208ENST00000555301 ZMYND10O75800 440 aa15.16■□□□□ 0.02
CHD8-208ENST00000555301 SEC24AO95486 1093 aa15.16■□□□□ 0.02
CHD8-208ENST00000555301 VNN2O95498 520 aa15.16■□□□□ 0.02
CHD8-208ENST00000555301 GLP2RO95838 553 aa15.16■□□□□ 0.02
CHD8-208ENST00000555301 TPM1P09493 284 aa15.16■□□□□ 0.02
CHD8-208ENST00000555301 CCDC172P0C7W6 258 aa15.16■□□□□ 0.02
CHD8-208ENST00000555301 HAPLN1P10915 354 aaPredicted RBP15.16■□□□□ 0.02
CHD8-208ENST00000555301 CCDC130P13994 396 aa15.16■□□□□ 0.02
CHD8-208ENST00000555301 HOXB8P17481 243 aaPredicted RBP15.16■□□□□ 0.02
CHD8-208ENST00000555301 BDNFP23560 247 aa15.16■□□□□ 0.02
CHD8-208ENST00000555301 GNA15P30679 374 aa15.16■□□□□ 0.02
CHD8-208ENST00000555301 HOXA9P31269 272 aa15.16■□□□□ 0.02
CHD8-208ENST00000555301 SOX5P35711 763 aa15.16■□□□□ 0.02
CHD8-208ENST00000555301 ALDH1A3P47895 512 aa15.16■□□□□ 0.02
CHD8-208ENST00000555301 PLD1Q13393 1074 aa15.16■□□□□ 0.02
CHD8-208ENST00000555301 CCDC142Q17RM4 750 aa15.16■□□□□ 0.02
CHD8-208ENST00000555301 PPP1R26Q5T8A7 1209 aaPredicted RBP15.16■□□□□ 0.02
CHD8-208ENST00000555301 FAM35AQ86V20 835 aa15.16■□□□□ 0.02
CHD8-208ENST00000555301 FUKQ8N0W3 1084 aa15.16■□□□□ 0.02
CHD8-208ENST00000555301 VN1R2Q8NFZ6 395 aa15.16■□□□□ 0.02
CHD8-208ENST00000555301 SLC7A14Q8TBB6 771 aa15.16■□□□□ 0.02
CHD8-208ENST00000555301 SMARCD1Q96GM5 515 aa15.16■□□□□ 0.02
CHD8-208ENST00000555301 SEPT5Q99719 369 aaPredicted RBP15.16■□□□□ 0.02
CHD8-208ENST00000555301 LPIN3Q9BQK8 851 aa15.16■□□□□ 0.02
CHD8-208ENST00000555301 NUCKS1Q9H1E3 243 aaKnown RBP15.16■□□□□ 0.02
CHD8-208ENST00000555301 SFXN1Q9H9B4 322 aa15.16■□□□□ 0.02
CHD8-208ENST00000555301 CLDND1Q9NY35 253 aa15.16■□□□□ 0.02
CHD8-208ENST00000555301 HESX1Q9UBX0 185 aa15.16■□□□□ 0.02
CHD8-208ENST00000555301 SLC27A5Q9Y2P5 690 aa15.16■□□□□ 0.02
CHD8-208ENST00000555301 INSL5Q9Y5Q6 135 aa15.16■□□□□ 0.02
CHD8-208ENST00000555301 CLDN5O00501 218 aa15.15■□□□□ 0.02
CHD8-208ENST00000555301 TRIM66O15016 1216 aa15.15■□□□□ 0.02
CHD8-208ENST00000555301 LINC01565O15544 149 aa15.15■□□□□ 0.02
CHD8-208ENST00000555301 LRG1P02750 347 aa15.15■□□□□ 0.02
CHD8-208ENST00000555301 HNRNPA1P09651 372 aaKnown RBP eCLIP15.15■□□□□ 0.02
CHD8-208ENST00000555301 FAM200BP0CF97 657 aa15.15■□□□□ 0.02
CHD8-208ENST00000555301 PNMA6AP0CW24 399 aaPredicted RBP15.15■□□□□ 0.02
CHD8-208ENST00000555301 CYP2F1P24903 491 aa15.15■□□□□ 0.02
CHD8-208ENST00000555301 CLCN1P35523 988 aa15.15■□□□□ 0.02
CHD8-208ENST00000555301 SLC8A3P57103 927 aa15.15■□□□□ 0.02
CHD8-208ENST00000555301 RPL10AP62906 217 aaKnown RBP15.15■□□□□ 0.02
CHD8-208ENST00000555301 ZBED6P86452 979 aa15.15■□□□□ 0.02
CHD8-208ENST00000555301 RBM10P98175 930 aaKnown RBP15.15■□□□□ 0.02
CHD8-208ENST00000555301 SKIV2LQ15477 1246 aaKnown RBP15.15■□□□□ 0.02
CHD8-208ENST00000555301 CCDC85BQ15834 202 aaPredicted RBP15.15■□□□□ 0.02
CHD8-208ENST00000555301 CNGA2Q16280 664 aa15.15■□□□□ 0.02
CHD8-208ENST00000555301 PPM1LQ5SGD2 360 aa15.15■□□□□ 0.02
CHD8-208ENST00000555301 LCLAT1Q6UWP7 414 aa15.15■□□□□ 0.02
CHD8-208ENST00000555301 PAQR9Q6ZVX9 377 aa15.15■□□□□ 0.02
CHD8-208ENST00000555301 CMASQ8NFW8 434 aaPredicted RBP15.15■□□□□ 0.02
CHD8-208ENST00000555301 BAP1Q92560 729 aa15.15■□□□□ 0.02
CHD8-208ENST00000555301 CEP295NLQ96MC4 621 aa15.15■□□□□ 0.02
CHD8-208ENST00000555301 ZNF518BQ9C0D4 1074 aa15.15■□□□□ 0.02
CHD8-208ENST00000555301 CRISPLD1Q9H336 500 aa15.15■□□□□ 0.02
CHD8-208ENST00000555301 GRPEL1Q9HAV7 217 aa15.15■□□□□ 0.02
CHD8-208ENST00000555301 CAPN11Q9UMQ6 739 aa15.15■□□□□ 0.02
CHD8-208ENST00000555301 LUC7L2Q9Y383 392 aaKnown RBP15.15■□□□□ 0.02
CHD8-208ENST00000555301 YIPF1Q9Y548 306 aa15.15■□□□□ 0.02
CHD8-208ENST00000555301 LRRC53A6NM62 1247 aa15.14■□□□□ 0.01
CHD8-208ENST00000555301 O00370 1275 aa15.14■□□□□ 0.01
CHD8-208ENST00000555301 THAP12O43422 761 aa15.14■□□□□ 0.01
CHD8-208ENST00000555301 AP1G2O75843 785 aa15.14■□□□□ 0.01
CHD8-208ENST00000555301 GFPT2O94808 682 aa15.14■□□□□ 0.01
CHD8-208ENST00000555301 GYPCP04921 128 aa15.14■□□□□ 0.01
CHD8-208ENST00000555301 POU2F2P09086 479 aa15.14■□□□□ 0.01
CHD8-208ENST00000555301 FERP16591 822 aa15.14■□□□□ 0.01
CHD8-208ENST00000555301 BRD2P25440 801 aaKnown RBP15.14■□□□□ 0.01
CHD8-208ENST00000555301 ANXA13P27216 316 aa15.14■□□□□ 0.01
CHD8-208ENST00000555301 ADORA2BP29275 332 aa15.14■□□□□ 0.01
CHD8-208ENST00000555301 GRIK1P39086 918 aa15.14■□□□□ 0.01
CHD8-208ENST00000555301 PDE6CP51160 858 aa15.14■□□□□ 0.01
CHD8-208ENST00000555301 CDR1P51861 262 aa15.14■□□□□ 0.01
CHD8-208ENST00000555301 TWF1Q12792 350 aa15.14■□□□□ 0.01
CHD8-208ENST00000555301 MEA1Q16626 185 aa15.14■□□□□ 0.01
CHD8-208ENST00000555301 ANKRD54Q6NXT1 300 aa15.14■□□□□ 0.01
CHD8-208ENST00000555301 CYP26C1Q6V0L0 522 aa15.14■□□□□ 0.01
CHD8-208ENST00000555301 EP400NLQ6ZTU2 488 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms