RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 PSD4Q8NDX1 1056 aa6.46□□□□□ -1.38
VRK1-203ENST00000555067 DPF1Q92782 380 aa6.46□□□□□ -1.38
VRK1-203ENST00000555067 RFKQ969G6 155 aa6.46□□□□□ -1.38
VRK1-203ENST00000555067 FKBP10Q96AY3 582 aa6.46□□□□□ -1.38
VRK1-203ENST00000555067 WDCPQ9H6R7 721 aa6.46□□□□□ -1.38
VRK1-203ENST00000555067 FLRT1Q9NZU1 646 aa6.46□□□□□ -1.38
VRK1-203ENST00000555067 PADI4Q9UM07 663 aa6.46□□□□□ -1.38
VRK1-203ENST00000555067 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.46□□□□□ -1.38
VRK1-203ENST00000555067 AOX1Q06278 1338 aa6.46□□□□□ -1.38
VRK1-203ENST00000555067 LINC01548A6NM66 108 aa6.45□□□□□ -1.38
VRK1-203ENST00000555067 KCNAB3O43448 404 aa6.45□□□□□ -1.38
VRK1-203ENST00000555067 NBPF7P0C2Y1 421 aaPredicted RBP6.45□□□□□ -1.38
VRK1-203ENST00000555067 NR2F6P10588 404 aa6.45□□□□□ -1.38
VRK1-203ENST00000555067 ZFXP17010 805 aaPredicted RBP6.45□□□□□ -1.38
VRK1-203ENST00000555067 CD53P19397 219 aa6.45□□□□□ -1.38
VRK1-203ENST00000555067 DRD4P21917 467 aa6.45□□□□□ -1.38
VRK1-203ENST00000555067 PRDX5P30044 214 aa6.45□□□□□ -1.38
VRK1-203ENST00000555067 POU5F1BQ06416 359 aa6.45□□□□□ -1.38
VRK1-203ENST00000555067 BMPR2Q13873 1038 aa6.45□□□□□ -1.38
VRK1-203ENST00000555067 RAPGEF1Q13905 1077 aa6.45□□□□□ -1.38
VRK1-203ENST00000555067 EZH2Q15910 746 aaKnown RBP6.45□□□□□ -1.38
VRK1-203ENST00000555067 TAF2Q6P1X5 1199 aa6.45□□□□□ -1.38
VRK1-203ENST00000555067 CAMKK1Q8N5S9 505 aa6.45□□□□□ -1.38
VRK1-203ENST00000555067 PJA1Q8NG27 643 aa6.45□□□□□ -1.38
VRK1-203ENST00000555067 DDX17Q92841 729 aaKnown RBP6.45□□□□□ -1.38
VRK1-203ENST00000555067 SARGQ9BW04 601 aa6.45□□□□□ -1.38
VRK1-203ENST00000555067 ACTRT3Q9BYD9 372 aa6.45□□□□□ -1.38
VRK1-203ENST00000555067 KRTAP2-2Q9BYT5 123 aa6.45□□□□□ -1.38
VRK1-203ENST00000555067 ZDHHC8Q9ULC8 765 aa6.45□□□□□ -1.38
VRK1-203ENST00000555067 LUC7L2Q9Y383 392 aaKnown RBP6.45□□□□□ -1.38
VRK1-203ENST00000555067 TBX3O15119 743 aa6.44□□□□□ -1.38
VRK1-203ENST00000555067 NXPH3O95157 252 aa6.44□□□□□ -1.38
VRK1-203ENST00000555067 CELA2AP08217 269 aa6.44□□□□□ -1.38
VRK1-203ENST00000555067 EBLN1P0CF75 366 aa6.44□□□□□ -1.38
VRK1-203ENST00000555067 BDNFP23560 247 aa6.44□□□□□ -1.38
VRK1-203ENST00000555067 CCT8P50990 548 aa6.44□□□□□ -1.38
VRK1-203ENST00000555067 LMOD3Q0VAK6 560 aa6.44□□□□□ -1.38
VRK1-203ENST00000555067 PICALMQ13492 652 aa6.44□□□□□ -1.38
VRK1-203ENST00000555067 LLGL1Q15334 1064 aa6.44□□□□□ -1.38
VRK1-203ENST00000555067 TMEM95Q3KNT9 176 aa6.44□□□□□ -1.38
VRK1-203ENST00000555067 FAM83BQ5T0W9 1011 aa6.44□□□□□ -1.38
VRK1-203ENST00000555067 FAM90A1Q86YD7 464 aa6.44□□□□□ -1.38
VRK1-203ENST00000555067 SEMA6DQ8NFY4 1073 aa6.44□□□□□ -1.38
VRK1-203ENST00000555067 ATRIPQ8WXE1 791 aa6.44□□□□□ -1.38
VRK1-203ENST00000555067 FAM136AQ96C01 138 aa6.44□□□□□ -1.38
VRK1-203ENST00000555067 SENP7Q9BQF6 1050 aa6.44□□□□□ -1.38
VRK1-203ENST00000555067 AMBRA1Q9C0C7 1298 aa6.44□□□□□ -1.38
VRK1-203ENST00000555067 TINAGL1Q9GZM7 467 aaPredicted RBP6.44□□□□□ -1.38
VRK1-203ENST00000555067 SLAMF7Q9NQ25 335 aa6.44□□□□□ -1.38
VRK1-203ENST00000555067 FEZ2Q9UHY8 353 aaPredicted RBP6.44□□□□□ -1.38
VRK1-203ENST00000555067 GNAI2P04899 355 aa6.43□□□□□ -1.38
VRK1-203ENST00000555067 CT47B1P0C2W7 299 aaPredicted RBP6.43□□□□□ -1.38
VRK1-203ENST00000555067 CCND1P24385 295 aa6.43□□□□□ -1.38
VRK1-203ENST00000555067 CD6P30203 668 aa6.43□□□□□ -1.38
VRK1-203ENST00000555067 ODF1Q14990 250 aa6.43□□□□□ -1.38
VRK1-203ENST00000555067 RBM20Q5T481 1227 aaKnown RBP6.43□□□□□ -1.38
VRK1-203ENST00000555067 ERAP2Q6P179 960 aa6.43□□□□□ -1.38
VRK1-203ENST00000555067 ZNF551Q7Z340 670 aaPredicted RBP6.43□□□□□ -1.38
VRK1-203ENST00000555067 PPP1R32Q7Z5V6 425 aa6.43□□□□□ -1.38
VRK1-203ENST00000555067 MORC1Q86VD1 984 aa6.43□□□□□ -1.38
VRK1-203ENST00000555067 TMTC2Q8N394 836 aa6.43□□□□□ -1.38
VRK1-203ENST00000555067 FAM109AQ8N4B1 249 aa6.43□□□□□ -1.38
VRK1-203ENST00000555067 MYRIPQ8NFW9 859 aa6.43□□□□□ -1.38
VRK1-203ENST00000555067 RGMAQ96B86 450 aa6.43□□□□□ -1.38
VRK1-203ENST00000555067 SMOC2Q9H3U7 446 aa6.43□□□□□ -1.38
VRK1-203ENST00000555067 PRDM11Q9NQV5 511 aa6.43□□□□□ -1.38
VRK1-203ENST00000555067 FBXO9Q9UK97 447 aaPredicted RBP6.43□□□□□ -1.38
VRK1-203ENST00000555067 RAD54BQ9Y620 910 aa6.43□□□□□ -1.38
VRK1-203ENST00000555067 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.42□□□□□ -1.38
VRK1-203ENST00000555067 LRRC14BA6NHZ5 514 aa6.42□□□□□ -1.38
VRK1-203ENST00000555067 PRSS29PA6NIE9 313 aa6.42□□□□□ -1.38
VRK1-203ENST00000555067 NPHP1O15259 732 aa6.42□□□□□ -1.38
VRK1-203ENST00000555067 ZRANB2O95218 330 aaKnown RBP eCLIP6.42□□□□□ -1.38
VRK1-203ENST00000555067 HOXB6P17509 224 aaKnown RBP6.42□□□□□ -1.38
VRK1-203ENST00000555067 SERPINB3P29508 390 aa6.42□□□□□ -1.38
VRK1-203ENST00000555067 HTR3AP46098 478 aa6.42□□□□□ -1.38
VRK1-203ENST00000555067 NOGQ13253 232 aa6.42□□□□□ -1.38
VRK1-203ENST00000555067 SRSF7Q16629 238 aaKnown RBP eCLIP6.42□□□□□ -1.38
VRK1-203ENST00000555067 WDR78Q5VTH9 848 aa6.42□□□□□ -1.38
VRK1-203ENST00000555067 DDB2Q92466 427 aa6.42□□□□□ -1.38
VRK1-203ENST00000555067 C1orf43Q9BWL3 253 aa6.42□□□□□ -1.38
VRK1-203ENST00000555067 SERTAD4Q9NUC0 356 aa6.42□□□□□ -1.38
VRK1-203ENST00000555067 PCDHA3Q9Y5H8 950 aa6.42□□□□□ -1.38
VRK1-203ENST00000555067 RPS6KL1Q9Y6S9 549 aa6.42□□□□□ -1.38
VRK1-203ENST00000555067 WDR91A4D1P6 747 aa6.41□□□□□ -1.38
VRK1-203ENST00000555067 APAF1O14727 1248 aa6.41□□□□□ -1.38
VRK1-203ENST00000555067 KIF20AO95235 890 aa6.41□□□□□ -1.38
VRK1-203ENST00000555067 HNRNPCP07910 306 aaKnown RBP eCLIP6.41□□□□□ -1.38
VRK1-203ENST00000555067 RECQLP46063 649 aaPredicted RBP6.41□□□□□ -1.38
VRK1-203ENST00000555067 HK3P52790 923 aa6.41□□□□□ -1.38
VRK1-203ENST00000555067 GRM1Q13255 1194 aa6.41□□□□□ -1.38
VRK1-203ENST00000555067 TBCCQ15814 346 aa6.41□□□□□ -1.38
VRK1-203ENST00000555067 MINDY4Q4G0A6 757 aa6.41□□□□□ -1.38
VRK1-203ENST00000555067 COBLL1Q53SF7 1204 aa6.41□□□□□ -1.38
VRK1-203ENST00000555067 ZNF618Q5T7W0 954 aa6.41□□□□□ -1.38
VRK1-203ENST00000555067 CEP85Q6P2H3 762 aa6.41□□□□□ -1.38
VRK1-203ENST00000555067 KLHDC4Q8TBB5 520 aa6.41□□□□□ -1.38
VRK1-203ENST00000555067 FAM167AQ96KS9 214 aa6.41□□□□□ -1.38
VRK1-203ENST00000555067 STRBPQ96SI9 672 aaKnown RBP6.41□□□□□ -1.38
VRK1-203ENST00000555067 NELL2Q99435 816 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms