RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 SETD3Q86TU7 594 aaPredicted RBP7.15□□□□□ -1.27
SYNE2-216ENST00000555002 RCOR2Q8IZ40 523 aa7.15□□□□□ -1.27
SYNE2-216ENST00000555002 CACTIN-AS1Q8N1I8 211 aa7.15□□□□□ -1.27
SYNE2-216ENST00000555002 AKAP7Q9P0M2 348 aaPredicted RBP7.15□□□□□ -1.27
SYNE2-216ENST00000555002 NEDD4P46934 1319 aa7.15□□□□□ -1.27
SYNE2-216ENST00000555002 MGAT4DA6NG13 374 aa7.14□□□□□ -1.27
SYNE2-216ENST00000555002 KRT6AP02538 564 aa7.14□□□□□ -1.27
SYNE2-216ENST00000555002 KRT6BP04259 564 aa7.14□□□□□ -1.27
SYNE2-216ENST00000555002 ODC1P11926 461 aa7.14□□□□□ -1.27
SYNE2-216ENST00000555002 KRT6CP48668 564 aa7.14□□□□□ -1.27
SYNE2-216ENST00000555002 LPIN1Q14693 890 aa7.14□□□□□ -1.27
SYNE2-216ENST00000555002 TTC23Q5W5X9 447 aa7.14□□□□□ -1.27
SYNE2-216ENST00000555002 SCAIQ8N9R8 606 aa7.14□□□□□ -1.27
SYNE2-216ENST00000555002 OSBPL9Q96SU4 736 aa7.14□□□□□ -1.27
SYNE2-216ENST00000555002 KIAA0232Q92628 1395 aa7.14□□□□□ -1.27
SYNE2-216ENST00000555002 YWHABP31946 246 aaKnown RBP7.14□□□□□ -1.27
SYNE2-216ENST00000555002 UGP2Q16851 508 aa7.14□□□□□ -1.27
SYNE2-216ENST00000555002 FAAH2Q6GMR7 532 aa7.14□□□□□ -1.27
SYNE2-216ENST00000555002 PDCD10Q9BUL8 212 aa7.14□□□□□ -1.27
SYNE2-216ENST00000555002 RHBGQ9H310 441 aa7.14□□□□□ -1.27
SYNE2-216ENST00000555002 ADRA2BP18089 450 aa7.14□□□□□ -1.27
SYNE2-216ENST00000555002 FGFR2P21802 821 aa7.14□□□□□ -1.27
SYNE2-216ENST00000555002 PEX5P50542 639 aa7.14□□□□□ -1.27
SYNE2-216ENST00000555002 STX4Q12846 297 aa7.14□□□□□ -1.27
SYNE2-216ENST00000555002 WDR72Q3MJ13 1102 aa7.14□□□□□ -1.27
SYNE2-216ENST00000555002 IER5Q5VY09 327 aa7.14□□□□□ -1.27
SYNE2-216ENST00000555002 C4orf33Q8N1A6 199 aa7.14□□□□□ -1.27
SYNE2-216ENST00000555002 C18orf8Q96DM3 657 aa7.14□□□□□ -1.27
SYNE2-216ENST00000555002 SLITRK1Q96PX8 696 aa7.14□□□□□ -1.27
SYNE2-216ENST00000555002 ZNF624Q9P2J8 865 aaPredicted RBP7.14□□□□□ -1.27
SYNE2-216ENST00000555002 GMNCA6NCL1 334 aa7.14□□□□□ -1.27
SYNE2-216ENST00000555002 CCDC188H7C350 402 aa7.14□□□□□ -1.27
SYNE2-216ENST00000555002 CLK2P49760 499 aaKnown RBP7.14□□□□□ -1.27
SYNE2-216ENST00000555002 MARSP56192 900 aaKnown RBP7.14□□□□□ -1.27
SYNE2-216ENST00000555002 CHI3L2Q15782 390 aa7.14□□□□□ -1.27
SYNE2-216ENST00000555002 TRPC4APQ8TEL6 797 aa7.14□□□□□ -1.27
SYNE2-216ENST00000555002 OMA1Q96E52 524 aa7.14□□□□□ -1.27
SYNE2-216ENST00000555002 XPO6Q96QU8 1125 aaKnown RBP7.14□□□□□ -1.27
SYNE2-216ENST00000555002 PUS7LQ9H0K6 701 aaKnown RBP7.14□□□□□ -1.27
SYNE2-216ENST00000555002 KLK14Q9P0G3 267 aa7.14□□□□□ -1.27
SYNE2-216ENST00000555002 CNOT7Q9UIV1 285 aaKnown RBP7.14□□□□□ -1.27
SYNE2-216ENST00000555002 ENO4A6NNW6 628 aa7.14□□□□□ -1.27
SYNE2-216ENST00000555002 ATP1A3P13637 1013 aa7.14□□□□□ -1.27
SYNE2-216ENST00000555002 CPA2P48052 419 aa7.14□□□□□ -1.27
SYNE2-216ENST00000555002 EFNA5P52803 228 aa7.14□□□□□ -1.27
SYNE2-216ENST00000555002 MICALL2Q8IY33 904 aa7.14□□□□□ -1.27
SYNE2-216ENST00000555002 FAM71DQ8N9W8 422 aa7.14□□□□□ -1.27
SYNE2-216ENST00000555002 TPD52L3Q96J77 140 aa7.14□□□□□ -1.27
SYNE2-216ENST00000555002 CARD14Q9BXL6 1004 aa7.14□□□□□ -1.27
SYNE2-216ENST00000555002 C10orf88Q9H8K7 445 aa7.14□□□□□ -1.27
SYNE2-216ENST00000555002 PRODHO43272 600 aa7.14□□□□□ -1.27
SYNE2-216ENST00000555002 ACOT2P49753 483 aa7.14□□□□□ -1.27
SYNE2-216ENST00000555002 ESRP1Q6NXG1 681 aaKnown RBP7.14□□□□□ -1.27
SYNE2-216ENST00000555002 DEFB128Q7Z7B8 93 aa7.14□□□□□ -1.27
SYNE2-216ENST00000555002 HOMEZQ8IX15 550 aa7.14□□□□□ -1.27
SYNE2-216ENST00000555002 KDM5DQ9BY66 1539 aa7.14□□□□□ -1.27
SYNE2-216ENST00000555002 ADGBQ8N7X0 1667 aa7.14□□□□□ -1.27
SYNE2-216ENST00000555002 MSH4O15457 936 aa7.14□□□□□ -1.27
SYNE2-216ENST00000555002 NDUFS2O75306 463 aa7.14□□□□□ -1.27
SYNE2-216ENST00000555002 RBMXL2O75526 392 aaKnown RBP7.14□□□□□ -1.27
SYNE2-216ENST00000555002 CYP2E1P05181 493 aaPredicted RBP7.14□□□□□ -1.27
SYNE2-216ENST00000555002 NCAM1P13591 858 aa7.14□□□□□ -1.27
SYNE2-216ENST00000555002 ATP6V1B2P21281 511 aa7.14□□□□□ -1.27
SYNE2-216ENST00000555002 NT5DC3Q86UY8 548 aa7.14□□□□□ -1.27
SYNE2-216ENST00000555002 POLR1BQ9H9Y6 1135 aa7.14□□□□□ -1.27
SYNE2-216ENST00000555002 VTI1BQ9UEU0 232 aa7.14□□□□□ -1.27
SYNE2-216ENST00000555002 RPRD2Q5VT52 1461 aaKnown RBP7.14□□□□□ -1.27
SYNE2-216ENST00000555002 STAT5BP51692 787 aa7.14□□□□□ -1.27
SYNE2-216ENST00000555002 CCNG1P51959 295 aa7.14□□□□□ -1.27
SYNE2-216ENST00000555002 NRG3P56975 720 aa7.14□□□□□ -1.27
SYNE2-216ENST00000555002 PEG10Q86TG7 708 aaKnown RBP7.14□□□□□ -1.27
SYNE2-216ENST00000555002 STX12Q86Y82 276 aa7.14□□□□□ -1.27
SYNE2-216ENST00000555002 RIN2Q8WYP3 895 aaPredicted RBP7.14□□□□□ -1.27
SYNE2-216ENST00000555002 KRT35Q92764 455 aa7.14□□□□□ -1.27
SYNE2-216ENST00000555002 SH2D3AQ9BRG2 576 aa7.14□□□□□ -1.27
SYNE2-216ENST00000555002 C6orf62Q9GZU0 229 aaPredicted RBP7.14□□□□□ -1.27
SYNE2-216ENST00000555002 TMEM117Q9H0C3 514 aa7.14□□□□□ -1.27
SYNE2-216ENST00000555002 LNPEPQ9UIQ6 1025 aa7.14□□□□□ -1.27
SYNE2-216ENST00000555002 TEX33O43247 280 aa7.14□□□□□ -1.27
SYNE2-216ENST00000555002 ZNF23P17027 643 aa7.14□□□□□ -1.27
SYNE2-216ENST00000555002 TGM2P21980 687 aa7.14□□□□□ -1.27
SYNE2-216ENST00000555002 MAPK1P28482 360 aa7.14□□□□□ -1.27
SYNE2-216ENST00000555002 ATN1P54259 1190 aaPredicted RBP7.14□□□□□ -1.27
SYNE2-216ENST00000555002 CYLC2Q14093 348 aaPredicted RBP7.14□□□□□ -1.27
SYNE2-216ENST00000555002 RESP18Q5W5W9 173 aa7.14□□□□□ -1.27
SYNE2-216ENST00000555002 FAM45BPQ6NSW5 357 aa7.14□□□□□ -1.27
SYNE2-216ENST00000555002 UBASH3BQ8TF42 649 aa7.14□□□□□ -1.27
SYNE2-216ENST00000555002 PIH1D3Q9NQM4 214 aaKnown RBP7.14□□□□□ -1.27
SYNE2-216ENST00000555002 DYTNA2CJ06 578 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 SOAT2O75908 522 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 CNPP09543 421 aaKnown RBP7.13□□□□□ -1.27
SYNE2-216ENST00000555002 MMRN1Q13201 1228 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 SGCGQ13326 291 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 SV2CQ496J9 727 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 TYW3Q6IPR3 259 aaKnown RBP7.13□□□□□ -1.27
SYNE2-216ENST00000555002 CDH24Q86UP0 819 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 BRSK2Q8IWQ3 736 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 ADGRF4Q8IZF3 695 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 CCDC185Q8N715 623 aa7.13□□□□□ -1.27
SYNE2-216ENST00000555002 MS4A14Q96JA4 679 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms