RNA–Protein interactions for RNA: ENST00000554997.1

SYNE2-215, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 711 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-215ENST00000554997 PCDHB5Q9Y5E4 795 aa10.83□□□□□ -0.68
SYNE2-215ENST00000554997 PCDHGC5Q9Y5F6 944 aa10.83□□□□□ -0.68
SYNE2-215ENST00000554997 MTMR11A4FU01 709 aa10.82□□□□□ -0.68
SYNE2-215ENST00000554997 O00370 1275 aa10.82□□□□□ -0.68
SYNE2-215ENST00000554997 PER2O15055 1255 aa10.82□□□□□ -0.68
SYNE2-215ENST00000554997 TGM5O43548 720 aa10.82□□□□□ -0.68
SYNE2-215ENST00000554997 MFAP3LO75121 409 aa10.82□□□□□ -0.68
SYNE2-215ENST00000554997 VNN2O95498 520 aa10.82□□□□□ -0.68
SYNE2-215ENST00000554997 SERPING1P05155 500 aa10.82□□□□□ -0.68
SYNE2-215ENST00000554997 PRKCIP41743 596 aa10.82□□□□□ -0.68
SYNE2-215ENST00000554997 TUFMP49411 452 aaKnown RBP10.82□□□□□ -0.68
SYNE2-215ENST00000554997 CLCN4P51793 760 aa10.82□□□□□ -0.68
SYNE2-215ENST00000554997 CDK17Q00537 523 aa10.82□□□□□ -0.68
SYNE2-215ENST00000554997 CYP27A1Q02318 531 aa10.82□□□□□ -0.68
SYNE2-215ENST00000554997 ADCY1Q08828 1119 aa10.82□□□□□ -0.68
SYNE2-215ENST00000554997 DUSP4Q13115 394 aa10.82□□□□□ -0.68
SYNE2-215ENST00000554997 ASIC2Q16515 512 aa10.82□□□□□ -0.68
SYNE2-215ENST00000554997 MEA1Q16626 185 aa10.82□□□□□ -0.68
SYNE2-215ENST00000554997 DUSP6Q16828 381 aa10.82□□□□□ -0.68
SYNE2-215ENST00000554997 VSTM1Q6UX27 236 aa10.82□□□□□ -0.68
SYNE2-215ENST00000554997 RBM23Q86U06 439 aaKnown RBP10.82□□□□□ -0.68
SYNE2-215ENST00000554997 NOP9Q86U38 636 aaKnown RBP10.82□□□□□ -0.68
SYNE2-215ENST00000554997 SPATA2LQ8IUW3 424 aaPredicted RBP10.82□□□□□ -0.68
SYNE2-215ENST00000554997 GLYCTKQ8IVS8 523 aa10.82□□□□□ -0.68
SYNE2-215ENST00000554997 TCEAL8Q8IYN2 117 aa10.82□□□□□ -0.68
SYNE2-215ENST00000554997 TC2NQ8N9U0 490 aa10.82□□□□□ -0.68
SYNE2-215ENST00000554997 ANKRD52Q8NB46 1076 aa10.82□□□□□ -0.68
SYNE2-215ENST00000554997 SPC24Q8NBT2 197 aa10.82□□□□□ -0.68
SYNE2-215ENST00000554997 ATAD1Q8NBU5 361 aa10.82□□□□□ -0.68
SYNE2-215ENST00000554997 SLC2A14Q8TDB8 520 aa10.82□□□□□ -0.68
SYNE2-215ENST00000554997 DDX1Q92499 740 aaKnown RBP10.82□□□□□ -0.68
SYNE2-215ENST00000554997 PANX2Q96RD6 677 aa10.82□□□□□ -0.68
SYNE2-215ENST00000554997 DUSP16Q9BY84 665 aa10.82□□□□□ -0.68
SYNE2-215ENST00000554997 LHX5Q9H2C1 402 aa10.82□□□□□ -0.68
SYNE2-215ENST00000554997 NSUN3Q9H649 340 aaKnown RBP10.82□□□□□ -0.68
SYNE2-215ENST00000554997 ABHD10Q9NUJ1 306 aa10.82□□□□□ -0.68
SYNE2-215ENST00000554997 FAM49BQ9NUQ9 324 aa10.82□□□□□ -0.68
SYNE2-215ENST00000554997 ZNHIT6Q9NWK9 470 aaKnown RBP10.82□□□□□ -0.68
SYNE2-215ENST00000554997 DPP7Q9UHL4 492 aa10.82□□□□□ -0.68
SYNE2-215ENST00000554997 PCDHGC3Q9UN70 934 aa10.82□□□□□ -0.68
SYNE2-215ENST00000554997 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.82□□□□□ -0.68
SYNE2-215ENST00000554997 MTCH2Q9Y6C9 303 aa10.82□□□□□ -0.68
SYNE2-215ENST00000554997 GOLGA6L6A8MZA4 724 aa10.81□□□□□ -0.68
SYNE2-215ENST00000554997 THAP12O43422 761 aa10.81□□□□□ -0.68
SYNE2-215ENST00000554997 CSPG5O95196 566 aa10.81□□□□□ -0.68
SYNE2-215ENST00000554997 SEC24AO95486 1093 aa10.81□□□□□ -0.68
SYNE2-215ENST00000554997 GLUD1P00367 558 aa10.81□□□□□ -0.68
SYNE2-215ENST00000554997 CALCAP01258 141 aa10.81□□□□□ -0.68
SYNE2-215ENST00000554997 HAPLN1P10915 354 aaPredicted RBP10.81□□□□□ -0.68
SYNE2-215ENST00000554997 SKILP12757 684 aa10.81□□□□□ -0.68
SYNE2-215ENST00000554997 CCDC130P13994 396 aa10.81□□□□□ -0.68
SYNE2-215ENST00000554997 CHRNB2P17787 502 aa10.81□□□□□ -0.68
SYNE2-215ENST00000554997 CYP2F1P24903 491 aa10.81□□□□□ -0.68
SYNE2-215ENST00000554997 BRD2P25440 801 aaKnown RBP10.81□□□□□ -0.68
SYNE2-215ENST00000554997 ELF1P32519 619 aa10.81□□□□□ -0.68
SYNE2-215ENST00000554997 MAGEA11P43364 429 aa10.81□□□□□ -0.68
SYNE2-215ENST00000554997 NRIP1P48552 1158 aa10.81□□□□□ -0.68
SYNE2-215ENST00000554997 PDE6CP51160 858 aa10.81□□□□□ -0.68
SYNE2-215ENST00000554997 CDR2Q01850 454 aa10.81□□□□□ -0.68
SYNE2-215ENST00000554997 KLHL30Q0D2K2 578 aa10.81□□□□□ -0.68
SYNE2-215ENST00000554997 KCNC3Q14003 757 aa10.81□□□□□ -0.68
SYNE2-215ENST00000554997 ADGRE1Q14246 886 aa10.81□□□□□ -0.68
SYNE2-215ENST00000554997 PKDCCQ504Y2 493 aa10.81□□□□□ -0.68
SYNE2-215ENST00000554997 E4F1Q66K89 784 aaPredicted RBP10.81□□□□□ -0.68
SYNE2-215ENST00000554997 HGSNATQ68CP4 663 aa10.81□□□□□ -0.68
SYNE2-215ENST00000554997 WDR59Q6PJI9 974 aa10.81□□□□□ -0.68
SYNE2-215ENST00000554997 TMEM184AQ6ZMB5 413 aa10.81□□□□□ -0.68
SYNE2-215ENST00000554997 CCDC149Q6ZUS6 474 aa10.81□□□□□ -0.68
SYNE2-215ENST00000554997 ADGRD2Q7Z7M1 963 aa10.81□□□□□ -0.68
SYNE2-215ENST00000554997 KREMEN2Q8NCW0 462 aa10.81□□□□□ -0.68
SYNE2-215ENST00000554997 EPS8L1Q8TE68 723 aa10.81□□□□□ -0.68
SYNE2-215ENST00000554997 MYLPFQ96A32 169 aa10.81□□□□□ -0.68
SYNE2-215ENST00000554997 CEP295NLQ96MC4 621 aa10.81□□□□□ -0.68
SYNE2-215ENST00000554997 FAM161BQ96MY7 647 aa10.81□□□□□ -0.68
SYNE2-215ENST00000554997 PGLYRP2Q96PD5 576 aa10.81□□□□□ -0.68
SYNE2-215ENST00000554997 AGPAT1Q99943 283 aa10.81□□□□□ -0.68
SYNE2-215ENST00000554997 MED10Q9BTT4 135 aa10.81□□□□□ -0.68
SYNE2-215ENST00000554997 PLEKHA4Q9H4M7 779 aa10.81□□□□□ -0.68
SYNE2-215ENST00000554997 HAUS4Q9H6D7 363 aa10.81□□□□□ -0.68
SYNE2-215ENST00000554997 CYP4F11Q9HBI6 524 aa10.81□□□□□ -0.68
SYNE2-215ENST00000554997 CSNK1G1Q9HCP0 422 aa10.81□□□□□ -0.68
SYNE2-215ENST00000554997 HESX1Q9UBX0 185 aa10.81□□□□□ -0.68
SYNE2-215ENST00000554997 NOCTQ9UK39 431 aaKnown RBP10.81□□□□□ -0.68
SYNE2-215ENST00000554997 TSPAN16Q9UKR8 245 aa10.81□□□□□ -0.68
SYNE2-215ENST00000554997 SLC27A5Q9Y2P5 690 aa10.81□□□□□ -0.68
SYNE2-215ENST00000554997 ATP8B3O60423 1300 aa10.81□□□□□ -0.68
SYNE2-215ENST00000554997 KIAA1671Q9BY89 1806 aa10.8□□□□□ -0.68
SYNE2-215ENST00000554997 CLDN5O00501 218 aa10.8□□□□□ -0.68
SYNE2-215ENST00000554997 NCK2O43639 380 aa10.8□□□□□ -0.68
SYNE2-215ENST00000554997 SPATA31D3P0C874 917 aa10.8□□□□□ -0.68
SYNE2-215ENST00000554997 FAM200BP0CF97 657 aa10.8□□□□□ -0.68
SYNE2-215ENST00000554997 TNFAIP3P21580 790 aa10.8□□□□□ -0.68
SYNE2-215ENST00000554997 BDNFP23560 247 aa10.8□□□□□ -0.68
SYNE2-215ENST00000554997 ADORA2BP29275 332 aa10.8□□□□□ -0.68
SYNE2-215ENST00000554997 GRIK1P39086 918 aa10.8□□□□□ -0.68
SYNE2-215ENST00000554997 GPD2P43304 727 aa10.8□□□□□ -0.68
SYNE2-215ENST00000554997 SLC8A3P57103 927 aa10.8□□□□□ -0.68
SYNE2-215ENST00000554997 GSDMDP57764 484 aa10.8□□□□□ -0.68
SYNE2-215ENST00000554997 RPL10AP62906 217 aaKnown RBP10.8□□□□□ -0.68
SYNE2-215ENST00000554997 GOLGA8FQ08AF8 430 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms