RNA–Protein interactions for RNA: ENST00000554995.1

PSEN1-211, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 592 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-211ENST00000554995 KLHL17Q6TDP4 642 aa6.31□□□□□ -1.4
PSEN1-211ENST00000554995 MAATS1Q7Z4T9 603 aa6.31□□□□□ -1.4
PSEN1-211ENST00000554995 KCTD20Q7Z5Y7 419 aa6.31□□□□□ -1.4
PSEN1-211ENST00000554995 ZNF280BQ86YH2 543 aa6.31□□□□□ -1.4
PSEN1-211ENST00000554995 OR1N1Q8NGS0 311 aa6.31□□□□□ -1.4
PSEN1-211ENST00000554995 SPPL3Q8TCT6 385 aa6.31□□□□□ -1.4
PSEN1-211ENST00000554995 LRRC37BQ96QE4 947 aa6.31□□□□□ -1.4
PSEN1-211ENST00000554995 SMOQ99835 787 aa6.31□□□□□ -1.4
PSEN1-211ENST00000554995 PLA2G12BQ9BX93 195 aa6.31□□□□□ -1.4
PSEN1-211ENST00000554995 CD320Q9NPF0 282 aa6.31□□□□□ -1.4
PSEN1-211ENST00000554995 KIF17Q9P2E2 1029 aa6.31□□□□□ -1.4
PSEN1-211ENST00000554995 DNMT3BQ9UBC3 853 aaKnown RBP6.31□□□□□ -1.4
PSEN1-211ENST00000554995 CLCA2Q9UQC9 943 aa6.31□□□□□ -1.4
PSEN1-211ENST00000554995 HS3ST4Q9Y661 456 aa6.31□□□□□ -1.4
PSEN1-211ENST00000554995 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.3□□□□□ -1.4
PSEN1-211ENST00000554995 AQP7P3A6NL99 342 aa6.3□□□□□ -1.4
PSEN1-211ENST00000554995 B9A039 149 aa6.3□□□□□ -1.4
PSEN1-211ENST00000554995 RRP9O43818 475 aaKnown RBP6.3□□□□□ -1.4
PSEN1-211ENST00000554995 USP1O94782 785 aa6.3□□□□□ -1.4
PSEN1-211ENST00000554995 POLBP06746 335 aa6.3□□□□□ -1.4
PSEN1-211ENST00000554995 ATXN1LP0C7T5 689 aaKnown RBP6.3□□□□□ -1.4
PSEN1-211ENST00000554995 GCSHP23434 173 aa6.3□□□□□ -1.4
PSEN1-211ENST00000554995 MGAT1P26572 445 aa6.3□□□□□ -1.4
PSEN1-211ENST00000554995 MAN1A1P33908 653 aa6.3□□□□□ -1.4
PSEN1-211ENST00000554995 PNLIPRP1P54315 467 aa6.3□□□□□ -1.4
PSEN1-211ENST00000554995 SLURP1P55000 103 aa6.3□□□□□ -1.4
PSEN1-211ENST00000554995 POLE2P56282 527 aa6.3□□□□□ -1.4
PSEN1-211ENST00000554995 PIGFQ07326 219 aa6.3□□□□□ -1.4
PSEN1-211ENST00000554995 G3BP1Q13283 466 aaKnown RBP eCLIP6.3□□□□□ -1.4
PSEN1-211ENST00000554995 ADCK5Q3MIX3 580 aa6.3□□□□□ -1.4
PSEN1-211ENST00000554995 ZIK1Q3SY52 487 aaPredicted RBP6.3□□□□□ -1.4
PSEN1-211ENST00000554995 MGAT5BQ3V5L5 792 aa6.3□□□□□ -1.4
PSEN1-211ENST00000554995 FAXCQ5TGI0 409 aa6.3□□□□□ -1.4
PSEN1-211ENST00000554995 CACHD1Q5VU97 1274 aa6.3□□□□□ -1.4
PSEN1-211ENST00000554995 TAPT1Q6NXT6 567 aa6.3□□□□□ -1.4
PSEN1-211ENST00000554995 SLC30A10Q6XR72 485 aa6.3□□□□□ -1.4
PSEN1-211ENST00000554995 LRRTM4Q86VH4 590 aa6.3□□□□□ -1.4
PSEN1-211ENST00000554995 FTSJ3Q8IY81 847 aaKnown RBP6.3□□□□□ -1.4
PSEN1-211ENST00000554995 ELOA2Q8IYF1 753 aaPredicted RBP6.3□□□□□ -1.4
PSEN1-211ENST00000554995 PSD4Q8NDX1 1056 aa6.3□□□□□ -1.4
PSEN1-211ENST00000554995 NSUN7Q8NE18 718 aaKnown RBP6.3□□□□□ -1.4
PSEN1-211ENST00000554995 OR52N2Q8NGI0 321 aa6.3□□□□□ -1.4
PSEN1-211ENST00000554995 ASB12Q8WXK4 309 aa6.3□□□□□ -1.4
PSEN1-211ENST00000554995 ST8SIA2Q92186 375 aa6.3□□□□□ -1.4
PSEN1-211ENST00000554995 FAM84AQ96KN4 292 aa6.3□□□□□ -1.4
PSEN1-211ENST00000554995 TRIB1Q96RU8 372 aa6.3□□□□□ -1.4
PSEN1-211ENST00000554995 LMF1Q96S06 567 aa6.3□□□□□ -1.4
PSEN1-211ENST00000554995 PYM1Q9BRP8 204 aaKnown RBP6.3□□□□□ -1.4
PSEN1-211ENST00000554995 TMX4Q9H1E5 349 aaPredicted RBP6.3□□□□□ -1.4
PSEN1-211ENST00000554995 FAM83DQ9H4H8 585 aa6.3□□□□□ -1.4
PSEN1-211ENST00000554995 SEC61A2Q9H9S3 476 aa6.3□□□□□ -1.4
PSEN1-211ENST00000554995 ZBTB26Q9HCK0 441 aa6.3□□□□□ -1.4
PSEN1-211ENST00000554995 SAYSD1Q9NPB0 183 aa6.3□□□□□ -1.4
PSEN1-211ENST00000554995 VSX1Q9NZR4 365 aaPredicted RBP6.3□□□□□ -1.4
PSEN1-211ENST00000554995 IFT80Q9P2H3 777 aaPredicted RBP6.3□□□□□ -1.4
PSEN1-211ENST00000554995 DTNAQ9Y4J8 743 aa6.3□□□□□ -1.4
PSEN1-211ENST00000554995 CDY1Q9Y6F8 540 aa6.3□□□□□ -1.4
PSEN1-211ENST00000554995 HMX3A6NHT5 357 aa6.29□□□□□ -1.4
PSEN1-211ENST00000554995 TISP43B9A030 160 aa6.29□□□□□ -1.4
PSEN1-211ENST00000554995 PCDH17O14917 1159 aa6.29□□□□□ -1.4
PSEN1-211ENST00000554995 COQ9O75208 318 aa6.29□□□□□ -1.4
PSEN1-211ENST00000554995 PIAS2O75928 621 aa6.29□□□□□ -1.4
PSEN1-211ENST00000554995 FAM155BO75949 473 aa6.29□□□□□ -1.4
PSEN1-211ENST00000554995 ACTL6BO94805 426 aa6.29□□□□□ -1.4
PSEN1-211ENST00000554995 GLP2RO95838 553 aa6.29□□□□□ -1.4
PSEN1-211ENST00000554995 C1QTNF9P0C862 333 aa6.29□□□□□ -1.4
PSEN1-211ENST00000554995 MST1P26927 711 aa6.29□□□□□ -1.4
PSEN1-211ENST00000554995 CST5P28325 142 aaPredicted RBP6.29□□□□□ -1.4
PSEN1-211ENST00000554995 ADD2P35612 726 aa6.29□□□□□ -1.4
PSEN1-211ENST00000554995 LINC00310P59036 64 aa6.29□□□□□ -1.4
PSEN1-211ENST00000554995 LILRA4P59901 499 aa6.29□□□□□ -1.4
PSEN1-211ENST00000554995 KRT17Q04695 432 aa6.29□□□□□ -1.4
PSEN1-211ENST00000554995 NSUN2Q08J23 767 aaKnown RBP eCLIP6.29□□□□□ -1.4
PSEN1-211ENST00000554995 GRM7Q14831 915 aa6.29□□□□□ -1.4
PSEN1-211ENST00000554995 FAM110CQ1W6H9 321 aa6.29□□□□□ -1.4
PSEN1-211ENST00000554995 TRIM71Q2Q1W2 868 aaKnown RBP6.29□□□□□ -1.4
PSEN1-211ENST00000554995 ZNF750Q32MQ0 723 aa6.29□□□□□ -1.4
PSEN1-211ENST00000554995 RETSATQ6NUM9 610 aa6.29□□□□□ -1.4
PSEN1-211ENST00000554995 TAF2Q6P1X5 1199 aa6.29□□□□□ -1.4
PSEN1-211ENST00000554995 ARHGEF18Q6ZSZ5 1173 aa6.29□□□□□ -1.4
PSEN1-211ENST00000554995 PLEKHH3Q7Z736 793 aa6.29□□□□□ -1.4
PSEN1-211ENST00000554995 TMTC1Q8IUR5 882 aa6.29□□□□□ -1.4
PSEN1-211ENST00000554995 SYT12Q8IV01 421 aa6.29□□□□□ -1.4
PSEN1-211ENST00000554995 CCDC117Q8IWD4 279 aaPredicted RBP6.29□□□□□ -1.4
PSEN1-211ENST00000554995 SIMC1Q8NDZ2 872 aa6.29□□□□□ -1.4
PSEN1-211ENST00000554995 SLC30A5Q8TAD4 765 aa6.29□□□□□ -1.4
PSEN1-211ENST00000554995 MARS2Q96GW9 593 aaKnown RBP6.29□□□□□ -1.4
PSEN1-211ENST00000554995 LRIG1Q96JA1 1093 aa6.29□□□□□ -1.4
PSEN1-211ENST00000554995 SEC62Q99442 399 aaKnown RBP6.29□□□□□ -1.4
PSEN1-211ENST00000554995 SLC46A2Q9BY10 475 aa6.29□□□□□ -1.4
PSEN1-211ENST00000554995 PABPC3Q9H361 631 aaKnown RBP6.29□□□□□ -1.4
PSEN1-211ENST00000554995 HECAQ9UBI9 543 aaPredicted RBP6.29□□□□□ -1.4
PSEN1-211ENST00000554995 LPAR3Q9UBY5 353 aa6.29□□□□□ -1.4
PSEN1-211ENST00000554995 FEM1BQ9UK73 627 aa6.29□□□□□ -1.4
PSEN1-211ENST00000554995 CA14Q9ULX7 337 aa6.29□□□□□ -1.4
PSEN1-211ENST00000554995 SHOC2Q9UQ13 582 aa6.29□□□□□ -1.4
PSEN1-211ENST00000554995 NOBOXO60393 691 aa6.28□□□□□ -1.4
PSEN1-211ENST00000554995 IPO13O94829 963 aaKnown RBP6.28□□□□□ -1.4
PSEN1-211ENST00000554995 FARP2O94887 1054 aaPredicted RBP6.28□□□□□ -1.4
PSEN1-211ENST00000554995 RASAL1O95294 804 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms