RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	NTSR2	O95665	410 aa		6.44	□□□□□ -1.38
PSMC6-208	ENST00000554956	POMC	P01189	267 aa		6.44	□□□□□ -1.38
PSMC6-208	ENST00000554956	MCM7	P33993	719 aa		6.44	□□□□□ -1.38
PSMC6-208	ENST00000554956	EPHX2	P34913	555 aa		6.44	□□□□□ -1.38
PSMC6-208	ENST00000554956	EPS15	P42566	896 aa		6.44	□□□□□ -1.38
PSMC6-208	ENST00000554956	CDC42EP1	Q00587	391 aa		6.44	□□□□□ -1.38
PSMC6-208	ENST00000554956	KRT24	Q2M2I5	525 aa		6.44	□□□□□ -1.38
PSMC6-208	ENST00000554956	USP51	Q70EK9	711 aa		6.44	□□□□□ -1.38
PSMC6-208	ENST00000554956	RHOU	Q7L0Q8	258 aa		6.44	□□□□□ -1.38
PSMC6-208	ENST00000554956	ZNF627	Q7L945	461 aa		6.44	□□□□□ -1.38
PSMC6-208	ENST00000554956	MRGPRE	Q86SM8	312 aa		6.44	□□□□□ -1.38
PSMC6-208	ENST00000554956	PLXDC1	Q8IUK5	500 aa		6.44	□□□□□ -1.38
PSMC6-208	ENST00000554956	CMTR2	Q8IYT2	770 aa	Known RBP	6.44	□□□□□ -1.38
PSMC6-208	ENST00000554956	IFI44	Q8TCB0	444 aa		6.44	□□□□□ -1.38
PSMC6-208	ENST00000554956	CHMP4C	Q96CF2	233 aa		6.44	□□□□□ -1.38
PSMC6-208	ENST00000554956	PCED1A	Q9H1Q7	454 aa		6.44	□□□□□ -1.38
PSMC6-208	ENST00000554956	AKIP1	Q9NQ31	210 aa		6.44	□□□□□ -1.38
PSMC6-208	ENST00000554956	MAP3K2	Q9Y2U5	619 aa		6.44	□□□□□ -1.38
PSMC6-208	ENST00000554956	LUC7L2	Q9Y383	392 aa	Known RBP	6.44	□□□□□ -1.38
PSMC6-208	ENST00000554956	SPEF1	Q9Y4P9	236 aa		6.44	□□□□□ -1.38
PSMC6-208	ENST00000554956	PCDHB1	Q9Y5F3	818 aa		6.44	□□□□□ -1.38
PSMC6-208	ENST00000554956	CNTNAP1	P78357	1384 aa		6.44	□□□□□ -1.38
PSMC6-208	ENST00000554956	FER1L6	Q2WGJ9	1857 aa		6.43	□□□□□ -1.38
PSMC6-208	ENST00000554956	TIAM2	Q8IVF5	1701 aa		6.43	□□□□□ -1.38
PSMC6-208	ENST00000554956	KIAA0391	O15091	583 aa	Known RBP	6.43	□□□□□ -1.38
PSMC6-208	ENST00000554956	TEX33	O43247	280 aa		6.43	□□□□□ -1.38
PSMC6-208	ENST00000554956	NDUFA10	O95299	355 aa		6.43	□□□□□ -1.38
PSMC6-208	ENST00000554956	ADH4	P08319	380 aa		6.43	□□□□□ -1.38
PSMC6-208	ENST00000554956	EIF2S2	P20042	333 aa	Known RBP	6.43	□□□□□ -1.38
PSMC6-208	ENST00000554956	MAK	P20794	623 aa		6.43	□□□□□ -1.38
PSMC6-208	ENST00000554956	ALDH1B1	P30837	517 aa		6.43	□□□□□ -1.38
PSMC6-208	ENST00000554956	PTGS2	P35354	604 aa		6.43	□□□□□ -1.38
PSMC6-208	ENST00000554956	RECQL	P46063	649 aa	Predicted RBP	6.43	□□□□□ -1.38
PSMC6-208	ENST00000554956	NEK2	P51955	445 aa		6.43	□□□□□ -1.38
PSMC6-208	ENST00000554956	ADK	P55263	362 aa	Known RBP	6.43	□□□□□ -1.38
PSMC6-208	ENST00000554956	ZNF280A	P59817	542 aa	Predicted RBP	6.43	□□□□□ -1.38
PSMC6-208	ENST00000554956	UBXN2B	Q14CS0	331 aa		6.43	□□□□□ -1.38
PSMC6-208	ENST00000554956	CCDC181	Q5TID7	509 aa		6.43	□□□□□ -1.38
PSMC6-208	ENST00000554956	AGAP9	Q5VTM2	703 aa		6.43	□□□□□ -1.38
PSMC6-208	ENST00000554956	LRRC55	Q6ZSA7	311 aa		6.43	□□□□□ -1.38
PSMC6-208	ENST00000554956	CNTROB	Q8N137	903 aa		6.43	□□□□□ -1.38
PSMC6-208	ENST00000554956	OR56A1	Q8NGH5	318 aa		6.43	□□□□□ -1.38
PSMC6-208	ENST00000554956	HAS1	Q92839	578 aa		6.43	□□□□□ -1.38
PSMC6-208	ENST00000554956	LENG9	Q96B70	501 aa		6.43	□□□□□ -1.38
PSMC6-208	ENST00000554956	PSMD1	Q99460	953 aa		6.43	□□□□□ -1.38
PSMC6-208	ENST00000554956	ZSWIM1	Q9BR11	485 aa		6.43	□□□□□ -1.38
PSMC6-208	ENST00000554956	HACL1	Q9UJ83	578 aa		6.43	□□□□□ -1.38
PSMC6-208	ENST00000554956	BCOR	Q6W2J9	1755 aa		6.42	□□□□□ -1.38
PSMC6-208	ENST00000554956	CENPVL1	A0A0U1RR11	272 aa		6.42	□□□□□ -1.38
PSMC6-208	ENST00000554956	RNASET2	O00584	256 aa	Known RBP	6.42	□□□□□ -1.38
PSMC6-208	ENST00000554956	CYR61	O00622	381 aa		6.42	□□□□□ -1.38
PSMC6-208	ENST00000554956	MARCH6	O60337	910 aa		6.42	□□□□□ -1.38
PSMC6-208	ENST00000554956	SBK3	P0C264	359 aa		6.42	□□□□□ -1.38
PSMC6-208	ENST00000554956	SLC6A4	P31645	630 aa		6.42	□□□□□ -1.38
PSMC6-208	ENST00000554956	RIPK4	P57078	832 aa		6.42	□□□□□ -1.38
PSMC6-208	ENST00000554956	CTXN1	P60606	82 aa		6.42	□□□□□ -1.38
PSMC6-208	ENST00000554956	FHL2	Q14192	279 aa		6.42	□□□□□ -1.38
PSMC6-208	ENST00000554956	CST9	Q5W186	159 aa		6.42	□□□□□ -1.38
PSMC6-208	ENST00000554956	TSHZ3	Q63HK5	1081 aa		6.42	□□□□□ -1.38
PSMC6-208	ENST00000554956	RHOT2	Q8IXI1	618 aa		6.42	□□□□□ -1.38
PSMC6-208	ENST00000554956	GPC2	Q8N158	579 aa		6.42	□□□□□ -1.38
PSMC6-208	ENST00000554956	PNISR	Q8TF01	805 aa	Known RBP	6.42	□□□□□ -1.38
PSMC6-208	ENST00000554956	HOOK2	Q96ED9	719 aa		6.42	□□□□□ -1.38
PSMC6-208	ENST00000554956	CRAMP1	Q96RY5	1269 aa		6.42	□□□□□ -1.38
PSMC6-208	ENST00000554956	DMRTA2	Q96SC8	542 aa		6.42	□□□□□ -1.38
PSMC6-208	ENST00000554956	C11orf54	Q9H0W9	315 aa	Predicted RBP	6.42	□□□□□ -1.38
PSMC6-208	ENST00000554956	AASDHPPT	Q9NRN7	309 aa		6.42	□□□□□ -1.38
PSMC6-208	ENST00000554956	KLHL11	Q9NVR0	708 aa		6.42	□□□□□ -1.38
PSMC6-208	ENST00000554956	TSPYL4	Q9UJ04	414 aa		6.42	□□□□□ -1.38
PSMC6-208	ENST00000554956	FZD1	Q9UP38	647 aa		6.42	□□□□□ -1.38
PSMC6-208	ENST00000554956	VIRMA	Q69YN4	1812 aa	Known RBP	6.41	□□□□□ -1.38
PSMC6-208	ENST00000554956	CDHR4	A6H8M9	788 aa		6.41	□□□□□ -1.38
PSMC6-208	ENST00000554956	UNC119B	A6NIH7	251 aa		6.41	□□□□□ -1.38
PSMC6-208	ENST00000554956	DIRC3	C9JPN6	131 aa		6.41	□□□□□ -1.38
PSMC6-208	ENST00000554956	LAG3	P18627	525 aa		6.41	□□□□□ -1.38
PSMC6-208	ENST00000554956	TMPO	P42166	694 aa	Known RBP	6.41	□□□□□ -1.38
PSMC6-208	ENST00000554956	FXR1	P51114	621 aa	Known RBP eCLIP	6.41	□□□□□ -1.38
PSMC6-208	ENST00000554956	CREM	Q03060	361 aa		6.41	□□□□□ -1.38
PSMC6-208	ENST00000554956	BEAN1	Q3B7T3	259 aa		6.41	□□□□□ -1.38
PSMC6-208	ENST00000554956	TIGD2	Q4W5G0	525 aa		6.41	□□□□□ -1.38
PSMC6-208	ENST00000554956	SLC10A5	Q5PT55	438 aa		6.41	□□□□□ -1.38
PSMC6-208	ENST00000554956	TMEM240	Q5SV17	173 aa		6.41	□□□□□ -1.38
PSMC6-208	ENST00000554956	ODR4	Q5SWX8	454 aa		6.41	□□□□□ -1.38
PSMC6-208	ENST00000554956	DLK2	Q6UY11	383 aa		6.41	□□□□□ -1.38
PSMC6-208	ENST00000554956	KIF6	Q6ZMV9	814 aa		6.41	□□□□□ -1.38
PSMC6-208	ENST00000554956		Q6ZPA2	131 aa		6.41	□□□□□ -1.38
PSMC6-208	ENST00000554956	COPS6	Q7L5N1	327 aa		6.41	□□□□□ -1.38
PSMC6-208	ENST00000554956	CCDC146	Q8IYE0	955 aa		6.41	□□□□□ -1.38
PSMC6-208	ENST00000554956	MIER2	Q8N344	545 aa		6.41	□□□□□ -1.38
PSMC6-208	ENST00000554956	CPA6	Q8N4T0	437 aa		6.41	□□□□□ -1.38
PSMC6-208	ENST00000554956	PROKR1	Q8TCW9	393 aa		6.41	□□□□□ -1.38
PSMC6-208	ENST00000554956	CLPTM1L	Q96KA5	538 aa		6.41	□□□□□ -1.38
PSMC6-208	ENST00000554956	MRGPRX4	Q96LA9	322 aa		6.41	□□□□□ -1.38
PSMC6-208	ENST00000554956	NYX	Q9GZU5	481 aa		6.41	□□□□□ -1.38
PSMC6-208	ENST00000554956	GSTO2	Q9H4Y5	243 aa		6.41	□□□□□ -1.38
PSMC6-208	ENST00000554956	DDX21	Q9NR30	783 aa	Known RBP eCLIP	6.41	□□□□□ -1.38
PSMC6-208	ENST00000554956	ANKFY1	Q9P2R3	1169 aa		6.41	□□□□□ -1.38
PSMC6-208	ENST00000554956	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	6.41	□□□□□ -1.38
PSMC6-208	ENST00000554956	HS3ST4	Q9Y661	456 aa		6.41	□□□□□ -1.38
PSMC6-208	ENST00000554956	ABCC4	O15439	1325 aa		6.41	□□□□□ -1.38

Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms