RNA–Protein interactions for RNA: ENST00000554952.5

PSMC6-207, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 1 (best)

Gene PSMC6, Length 1,037 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-207ENST00000554952 PRAMEF12O95522 483 aa12.72□□□□□ -0.37
PSMC6-207ENST00000554952 CST3P01034 146 aaPredicted RBP12.72□□□□□ -0.37
PSMC6-207ENST00000554952 PDGFRBP09619 1106 aa12.72□□□□□ -0.37
PSMC6-207ENST00000554952 CSH1P0DML2 217 aa12.72□□□□□ -0.37
PSMC6-207ENST00000554952 CSH2P0DML3 217 aa12.72□□□□□ -0.37
PSMC6-207ENST00000554952 LMO2P25791 158 aa12.72□□□□□ -0.37
PSMC6-207ENST00000554952 WEE1P30291 646 aa12.72□□□□□ -0.37
PSMC6-207ENST00000554952 AVPR1AP37288 418 aa12.72□□□□□ -0.37
PSMC6-207ENST00000554952 MLLT6P55198 1093 aaPredicted RBP12.72□□□□□ -0.37
PSMC6-207ENST00000554952 NLRP12P59046 1061 aa12.72□□□□□ -0.37
PSMC6-207ENST00000554952 SNRPFP62306 86 aaKnown RBP12.72□□□□□ -0.37
PSMC6-207ENST00000554952 EHHADHQ08426 723 aa12.72□□□□□ -0.37
PSMC6-207ENST00000554952 CCDC142Q17RM4 750 aa12.72□□□□□ -0.37
PSMC6-207ENST00000554952 ZNF528Q3MIS6 628 aa12.72□□□□□ -0.37
PSMC6-207ENST00000554952 TXNDC8Q6A555 127 aa12.72□□□□□ -0.37
PSMC6-207ENST00000554952 TSSK4Q6SA08 328 aa12.72□□□□□ -0.37
PSMC6-207ENST00000554952 TMEM150AQ86TG1 271 aa12.72□□□□□ -0.37
PSMC6-207ENST00000554952 WDR49Q8IV35 697 aa12.72□□□□□ -0.37
PSMC6-207ENST00000554952 SCN4BQ8IWT1 228 aa12.72□□□□□ -0.37
PSMC6-207ENST00000554952 CMTM8Q8IZV2 173 aa12.72□□□□□ -0.37
PSMC6-207ENST00000554952 ZNF687Q8N1G0 1237 aa12.72□□□□□ -0.37
PSMC6-207ENST00000554952 CELF5Q8N6W0 485 aaKnown RBP12.72□□□□□ -0.37
PSMC6-207ENST00000554952 SPATA18Q8TC71 538 aa12.72□□□□□ -0.37
PSMC6-207ENST00000554952 BPIFB1Q8TDL5 484 aa12.72□□□□□ -0.37
PSMC6-207ENST00000554952 PKMYT1Q99640 499 aa12.72□□□□□ -0.37
PSMC6-207ENST00000554952 C8orf33Q9H7E9 229 aaPredicted RBP12.72□□□□□ -0.37
PSMC6-207ENST00000554952 ABCB6Q9NP58 842 aa12.72□□□□□ -0.37
PSMC6-207ENST00000554952 THG1LQ9NWX6 298 aaKnown RBP12.72□□□□□ -0.37
PSMC6-207ENST00000554952 GTSE1Q9NYZ3 720 aa12.72□□□□□ -0.37
PSMC6-207ENST00000554952 GTF3C3Q9Y5Q9 886 aa12.72□□□□□ -0.37
PSMC6-207ENST00000554952 TICRRQ7Z2Z1 1910 aa12.72□□□□□ -0.37
PSMC6-207ENST00000554952 VPS13AQ96RL7 3174 aa12.71□□□□□ -0.37
PSMC6-207ENST00000554952 UBE4BO95155 1302 aa12.71□□□□□ -0.37
PSMC6-207ENST00000554952 A0A1B0GVL5 298 aa12.71□□□□□ -0.37
PSMC6-207ENST00000554952 EXOC3O60645 756 aa12.71□□□□□ -0.37
PSMC6-207ENST00000554952 KINO60870 393 aaKnown RBP12.71□□□□□ -0.37
PSMC6-207ENST00000554952 SLFN14P0C7P3 912 aa12.71□□□□□ -0.37
PSMC6-207ENST00000554952 TNK2Q07912 1038 aa12.71□□□□□ -0.37
PSMC6-207ENST00000554952 CYP24A1Q07973 514 aa12.71□□□□□ -0.37
PSMC6-207ENST00000554952 PSMD6Q15008 389 aa12.71□□□□□ -0.37
PSMC6-207ENST00000554952 KNOP1Q1ED39 458 aaKnown RBP12.71□□□□□ -0.37
PSMC6-207ENST00000554952 FAM171BQ6P995 826 aa12.71□□□□□ -0.37
PSMC6-207ENST00000554952 MON1AQ86VX9 555 aa12.71□□□□□ -0.37
PSMC6-207ENST00000554952 LEO1Q8WVC0 666 aaPredicted RBP12.71□□□□□ -0.37
PSMC6-207ENST00000554952 KBTBD7Q8WVZ9 684 aa12.71□□□□□ -0.37
PSMC6-207ENST00000554952 MRPS31Q92665 395 aaKnown RBP12.71□□□□□ -0.37
PSMC6-207ENST00000554952 PAGE5Q96GU1 130 aa12.71□□□□□ -0.37
PSMC6-207ENST00000554952 CHAMP1Q96JM3 812 aa12.71□□□□□ -0.37
PSMC6-207ENST00000554952 HINFPQ9BQA5 517 aa12.71□□□□□ -0.37
PSMC6-207ENST00000554952 SYT15Q9BQS2 421 aa12.71□□□□□ -0.37
PSMC6-207ENST00000554952 CHRDQ9H2X0 955 aa12.71□□□□□ -0.37
PSMC6-207ENST00000554952 GKN1Q9NS71 199 aa12.71□□□□□ -0.37
PSMC6-207ENST00000554952 MAGEC2Q9UBF1 373 aaPredicted RBP12.71□□□□□ -0.37
PSMC6-207ENST00000554952 ZMYM5Q9UJ78 669 aa12.71□□□□□ -0.37
PSMC6-207ENST00000554952 CDH9Q9ULB4 789 aa12.71□□□□□ -0.37
PSMC6-207ENST00000554952 CFAP54Q96N23 3096 aa12.71□□□□□ -0.38
PSMC6-207ENST00000554952 DMDP11532 3685 aa12.7□□□□□ -0.38
PSMC6-207ENST00000554952 ZNF638Q14966 1978 aaKnown RBP12.7□□□□□ -0.38
PSMC6-207ENST00000554952 SPECC1L-ADORA2AF8WAN1 911 aa12.7□□□□□ -0.38
PSMC6-207ENST00000554952 PHACTR2O75167 634 aa12.7□□□□□ -0.38
PSMC6-207ENST00000554952 CHRNB1P11230 501 aa12.7□□□□□ -0.38
PSMC6-207ENST00000554952 CMA1P23946 247 aa12.7□□□□□ -0.38
PSMC6-207ENST00000554952 DDX6P26196 483 aaKnown RBP eCLIP12.7□□□□□ -0.38
PSMC6-207ENST00000554952 GNL1P36915 607 aaPredicted RBP12.7□□□□□ -0.38
PSMC6-207ENST00000554952 PSMC1P62191 440 aaKnown RBP12.7□□□□□ -0.38
PSMC6-207ENST00000554952 PLCB2Q00722 1185 aa12.7□□□□□ -0.38
PSMC6-207ENST00000554952 STK4Q13043 487 aa12.7□□□□□ -0.38
PSMC6-207ENST00000554952 TRPC3Q13507 836 aa12.7□□□□□ -0.38
PSMC6-207ENST00000554952 BMT2Q1RMZ1 405 aa12.7□□□□□ -0.38
PSMC6-207ENST00000554952 WDR72Q3MJ13 1102 aa12.7□□□□□ -0.38
PSMC6-207ENST00000554952 CFAP221Q4G0U5 840 aa12.7□□□□□ -0.38
PSMC6-207ENST00000554952 C1orf228Q6PIY5 440 aa12.7□□□□□ -0.38
PSMC6-207ENST00000554952 C4orf50Q6ZRC1 276 aa12.7□□□□□ -0.38
PSMC6-207ENST00000554952 LIMS2Q7Z4I7 341 aa12.7□□□□□ -0.38
PSMC6-207ENST00000554952 RALGPS2Q86X27 583 aaPredicted RBP12.7□□□□□ -0.38
PSMC6-207ENST00000554952 ZNF516Q92618 1163 aa12.7□□□□□ -0.38
PSMC6-207ENST00000554952 USP13Q92995 863 aaPredicted RBP12.7□□□□□ -0.38
PSMC6-207ENST00000554952 FUBP3Q96I24 572 aaKnown RBP eCLIP12.7□□□□□ -0.38
PSMC6-207ENST00000554952 SPATA32Q96LK8 384 aa12.7□□□□□ -0.38
PSMC6-207ENST00000554952 CGRRF1Q99675 332 aa12.7□□□□□ -0.38
PSMC6-207ENST00000554952 MRPL45Q9BRJ2 306 aaKnown RBP12.7□□□□□ -0.38
PSMC6-207ENST00000554952 SNX25Q9H3E2 840 aa12.7□□□□□ -0.38
PSMC6-207ENST00000554952 TDP1Q9NUW8 608 aa12.7□□□□□ -0.38
PSMC6-207ENST00000554952 ZSCAN32Q9NX65 697 aa12.7□□□□□ -0.38
PSMC6-207ENST00000554952 CGNQ9P2M7 1197 aaKnown RBP12.7□□□□□ -0.38
PSMC6-207ENST00000554952 UXTQ9UBK9 157 aaPredicted RBP12.7□□□□□ -0.38
PSMC6-207ENST00000554952 CCL26Q9Y258 94 aa12.7□□□□□ -0.38
PSMC6-207ENST00000554952 PCDHGA2Q9Y5H1 932 aa12.7□□□□□ -0.38
PSMC6-207ENST00000554952 FANCMQ8IYD8 2048 aa12.7□□□□□ -0.38
PSMC6-207ENST00000554952 SDK1Q7Z5N4 2213 aa12.7□□□□□ -0.38
PSMC6-207ENST00000554952 CEP250Q9BV73 2442 aa12.7□□□□□ -0.38
PSMC6-207ENST00000554952 SOBPA7XYQ1 873 aa12.69□□□□□ -0.38
PSMC6-207ENST00000554952 ACTN4O43707 911 aaKnown RBP12.69□□□□□ -0.38
PSMC6-207ENST00000554952 KLRC4O43908 158 aa12.69□□□□□ -0.38
PSMC6-207ENST00000554952 NOL4O94818 638 aa12.69□□□□□ -0.38
PSMC6-207ENST00000554952 PFKFB1P16118 471 aa12.69□□□□□ -0.38
PSMC6-207ENST00000554952 WARSP23381 471 aaKnown RBP12.69□□□□□ -0.38
PSMC6-207ENST00000554952 BDNFP23560 247 aa12.69□□□□□ -0.38
PSMC6-207ENST00000554952 CTHP32929 405 aa12.69□□□□□ -0.38
PSMC6-207ENST00000554952 GRIK1P39086 918 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms