RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 ZCWPW1Q9H0M4 648 aa15.22■□□□□ 0.03
SHOX2-206ENST00000554685 CRTAC1Q9NQ79 661 aa15.22■□□□□ 0.03
SHOX2-206ENST00000554685 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.22■□□□□ 0.03
SHOX2-206ENST00000554685 CHST7Q9NS84 486 aa15.22■□□□□ 0.03
SHOX2-206ENST00000554685 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.22■□□□□ 0.03
SHOX2-206ENST00000554685 LZTS1Q9Y250 596 aa15.22■□□□□ 0.03
SHOX2-206ENST00000554685 REXO2Q9Y3B8 237 aaKnown RBP15.22■□□□□ 0.03
SHOX2-206ENST00000554685 BACE2Q9Y5Z0 518 aa15.22■□□□□ 0.03
SHOX2-206ENST00000554685 TSC2P49815 1807 aa15.22■□□□□ 0.03
SHOX2-206ENST00000554685 PTPRSQ13332 1948 aa15.21■□□□□ 0.03
SHOX2-206ENST00000554685 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.21■□□□□ 0.03
SHOX2-206ENST00000554685 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.21■□□□□ 0.03
SHOX2-206ENST00000554685 TMCO5BA8MYB1 307 aa15.21■□□□□ 0.03
SHOX2-206ENST00000554685 H0YGN5 161 aa15.21■□□□□ 0.03
SHOX2-206ENST00000554685 PJA2O43164 708 aa15.21■□□□□ 0.03
SHOX2-206ENST00000554685 HCRTO43612 131 aa15.21■□□□□ 0.03
SHOX2-206ENST00000554685 ATP2C2O75185 946 aa15.21■□□□□ 0.03
SHOX2-206ENST00000554685 FGF18O76093 207 aa15.21■□□□□ 0.03
SHOX2-206ENST00000554685 RB1P06400 928 aa15.21■□□□□ 0.03
SHOX2-206ENST00000554685 TMEM253P0C7T8 217 aa15.21■□□□□ 0.03
SHOX2-206ENST00000554685 FAM200BP0CF97 657 aa15.21■□□□□ 0.03
SHOX2-206ENST00000554685 ADORA2BP29275 332 aa15.21■□□□□ 0.03
SHOX2-206ENST00000554685 DSG1Q02413 1049 aa15.21■□□□□ 0.03
SHOX2-206ENST00000554685 RAB30Q15771 203 aa15.21■□□□□ 0.03
SHOX2-206ENST00000554685 PSMD5Q16401 504 aa15.21■□□□□ 0.03
SHOX2-206ENST00000554685 RTP2Q5QGT7 225 aa15.21■□□□□ 0.03
SHOX2-206ENST00000554685 LIN9Q5TKA1 542 aa15.21■□□□□ 0.03
SHOX2-206ENST00000554685 DENND1BQ6P3S1 775 aa15.21■□□□□ 0.03
SHOX2-206ENST00000554685 PALB2Q86YC2 1186 aa15.21■□□□□ 0.03
SHOX2-206ENST00000554685 SPATA2LQ8IUW3 424 aaPredicted RBP15.21■□□□□ 0.03
SHOX2-206ENST00000554685 OR10T2Q8NGX3 314 aa15.21■□□□□ 0.03
SHOX2-206ENST00000554685 SLC2A14Q8TDB8 520 aa15.21■□□□□ 0.03
SHOX2-206ENST00000554685 IPO4Q8TEX9 1081 aaKnown RBP15.21■□□□□ 0.03
SHOX2-206ENST00000554685 STK32AQ8WU08 396 aa15.21■□□□□ 0.03
SHOX2-206ENST00000554685 RIN2Q8WYP3 895 aaPredicted RBP15.21■□□□□ 0.03
SHOX2-206ENST00000554685 SMARCD1Q96GM5 515 aa15.21■□□□□ 0.03
SHOX2-206ENST00000554685 FUBP3Q96I24 572 aaKnown RBP eCLIP15.21■□□□□ 0.03
SHOX2-206ENST00000554685 CALR3Q96L12 384 aaKnown RBP15.21■□□□□ 0.03
SHOX2-206ENST00000554685 CYLDQ9NQC7 956 aa15.21■□□□□ 0.03
SHOX2-206ENST00000554685 MTRRQ9UBK8 725 aa15.21■□□□□ 0.03
SHOX2-206ENST00000554685 GTF3C4Q9UKN8 822 aa15.21■□□□□ 0.03
SHOX2-206ENST00000554685 STRIP2Q9ULQ0 834 aa15.21■□□□□ 0.03
SHOX2-206ENST00000554685 MYBPHLA2RUH7 354 aa15.2■□□□□ 0.02
SHOX2-206ENST00000554685 LINC01553A4QN01 128 aa15.2■□□□□ 0.02
SHOX2-206ENST00000554685 BTNL10A8MVZ5 291 aa15.2■□□□□ 0.02
SHOX2-206ENST00000554685 ESPNB1AK53 854 aa15.2■□□□□ 0.02
SHOX2-206ENST00000554685 CALB1P05937 261 aa15.2■□□□□ 0.02
SHOX2-206ENST00000554685 LINC00271P0C7V0 271 aa15.2■□□□□ 0.02
SHOX2-206ENST00000554685 CCDC130P13994 396 aa15.2■□□□□ 0.02
SHOX2-206ENST00000554685 GPD2P43304 727 aa15.2■□□□□ 0.02
SHOX2-206ENST00000554685 RGS19P49795 217 aa15.2■□□□□ 0.02
SHOX2-206ENST00000554685 GALCP54803 685 aa15.2■□□□□ 0.02
SHOX2-206ENST00000554685 UBE3AQ05086 875 aa15.2■□□□□ 0.02
SHOX2-206ENST00000554685 IFI16Q16666 785 aaKnown RBP15.2■□□□□ 0.02
SHOX2-206ENST00000554685 KIAA0319Q5VV43 1072 aa15.2■□□□□ 0.02
SHOX2-206ENST00000554685 FAM35AQ86V20 835 aa15.2■□□□□ 0.02
SHOX2-206ENST00000554685 ERICH1Q86X53 443 aa15.2■□□□□ 0.02
SHOX2-206ENST00000554685 FUKQ8N0W3 1084 aa15.2■□□□□ 0.02
SHOX2-206ENST00000554685 C1orf131Q8NDD1 294 aaKnown RBP15.2■□□□□ 0.02
SHOX2-206ENST00000554685 C2orf15Q8WU43 125 aaKnown RBP15.2■□□□□ 0.02
SHOX2-206ENST00000554685 CPA5Q8WXQ8 436 aa15.2■□□□□ 0.02
SHOX2-206ENST00000554685 MYLPFQ96A32 169 aa15.2■□□□□ 0.02
SHOX2-206ENST00000554685 PCED1BQ96HM7 432 aa15.2■□□□□ 0.02
SHOX2-206ENST00000554685 PKMYT1Q99640 499 aa15.2■□□□□ 0.02
SHOX2-206ENST00000554685 C11orf84Q9BUA3 381 aaPredicted RBP15.2■□□□□ 0.02
SHOX2-206ENST00000554685 DUSP16Q9BY84 665 aa15.2■□□□□ 0.02
SHOX2-206ENST00000554685 MRPL17Q9NRX2 175 aaKnown RBP15.2■□□□□ 0.02
SHOX2-206ENST00000554685 TRMT1Q9NXH9 659 aaKnown RBP15.2■□□□□ 0.02
SHOX2-206ENST00000554685 TAS2R14Q9NYV8 317 aa15.2■□□□□ 0.02
SHOX2-206ENST00000554685 ADAM22Q9P0K1 906 aa15.2■□□□□ 0.02
SHOX2-206ENST00000554685 MSRAQ9UJ68 235 aa15.2■□□□□ 0.02
SHOX2-206ENST00000554685 A0A0A6YYK5 440 aaPredicted RBP15.19■□□□□ 0.02
SHOX2-206ENST00000554685 LCHNA4D1U4 455 aa15.19■□□□□ 0.02
SHOX2-206ENST00000554685 C5orf67F2Z3F1 127 aa15.19■□□□□ 0.02
SHOX2-206ENST00000554685 XPO1O14980 1071 aaKnown RBP15.19■□□□□ 0.02
SHOX2-206ENST00000554685 TBC1D4O60343 1298 aa15.19■□□□□ 0.02
SHOX2-206ENST00000554685 CFHP08603 1231 aa15.19■□□□□ 0.02
SHOX2-206ENST00000554685 CPB1P15086 417 aa15.19■□□□□ 0.02
SHOX2-206ENST00000554685 NPR3P17342 541 aa15.19■□□□□ 0.02
SHOX2-206ENST00000554685 MMP8P22894 467 aa15.19■□□□□ 0.02
SHOX2-206ENST00000554685 SSTR3P32745 418 aaPredicted RBP15.19■□□□□ 0.02
SHOX2-206ENST00000554685 ACADSBP45954 432 aa15.19■□□□□ 0.02
SHOX2-206ENST00000554685 RABGGTBP53611 331 aa15.19■□□□□ 0.02
SHOX2-206ENST00000554685 GPC5P78333 572 aa15.19■□□□□ 0.02
SHOX2-206ENST00000554685 PDCLQ13371 301 aa15.19■□□□□ 0.02
SHOX2-206ENST00000554685 SLC39A12Q504Y0 691 aa15.19■□□□□ 0.02
SHOX2-206ENST00000554685 PKDCCQ504Y2 493 aa15.19■□□□□ 0.02
SHOX2-206ENST00000554685 TAS1R1Q7RTX1 841 aa15.19■□□□□ 0.02
SHOX2-206ENST00000554685 TTC30AQ86WT1 665 aa15.19■□□□□ 0.02
SHOX2-206ENST00000554685 REXO1L1PQ8IX06 675 aa15.19■□□□□ 0.02
SHOX2-206ENST00000554685 RHOT2Q8IXI1 618 aa15.19■□□□□ 0.02
SHOX2-206ENST00000554685 MCOLN2Q8IZK6 566 aa15.19■□□□□ 0.02
SHOX2-206ENST00000554685 VPS52Q8N1B4 723 aa15.19■□□□□ 0.02
SHOX2-206ENST00000554685 KLHL23Q8NBE8 558 aa15.19■□□□□ 0.02
SHOX2-206ENST00000554685 UBA3Q8TBC4 463 aa15.19■□□□□ 0.02
SHOX2-206ENST00000554685 SPPL2BQ8TCT7 592 aa15.19■□□□□ 0.02
SHOX2-206ENST00000554685 SECISBP2LQ93073 1101 aaKnown RBP15.19■□□□□ 0.02
SHOX2-206ENST00000554685 PPP1R13BQ96KQ4 1090 aa15.19■□□□□ 0.02
SHOX2-206ENST00000554685 HSFY1Q96LI6 401 aa15.19■□□□□ 0.02
SHOX2-206ENST00000554685 TGS1Q96RS0 853 aaKnown RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms