RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 DDR2Q16832 855 aa26.02■■□□□ 1.76
FOXA1-204ENST00000554607 INTS6LQ5JSJ4 861 aaKnown RBP26.02■■□□□ 1.76
FOXA1-204ENST00000554607 BRAPQ7Z569 592 aa26.02■■□□□ 1.76
FOXA1-204ENST00000554607 SFR1Q86XK3 245 aa26.02■■□□□ 1.76
FOXA1-204ENST00000554607 SPATA18Q8TC71 538 aa26.02■■□□□ 1.76
FOXA1-204ENST00000554607 OSCP1Q8WVF1 389 aa26.02■■□□□ 1.76
FOXA1-204ENST00000554607 CD101Q93033 1021 aa26.02■■□□□ 1.76
FOXA1-204ENST00000554607 ATP2A3Q93084 1043 aa26.02■■□□□ 1.76
FOXA1-204ENST00000554607 ACDQ96AP0 544 aa26.02■■□□□ 1.76
FOXA1-204ENST00000554607 HHIPQ96QV1 700 aa26.02■■□□□ 1.76
FOXA1-204ENST00000554607 FAM213AQ9BRX8 229 aa26.02■■□□□ 1.76
FOXA1-204ENST00000554607 EBF1Q9UH73 591 aa26.02■■□□□ 1.76
FOXA1-204ENST00000554607 SMC3Q9UQE7 1217 aa26.02■■□□□ 1.76
FOXA1-204ENST00000554607 TRAV19A0A0A6YYK7 116 aa26.01■■□□□ 1.75
FOXA1-204ENST00000554607 TULP1O00294 542 aaPredicted RBP26.01■■□□□ 1.75
FOXA1-204ENST00000554607 PPP1R37O75864 691 aa26.01■■□□□ 1.75
FOXA1-204ENST00000554607 APBB3O95704 486 aa26.01■■□□□ 1.75
FOXA1-204ENST00000554607 LDHAP00338 332 aaKnown RBP26.01■■□□□ 1.75
FOXA1-204ENST00000554607 ITGB3P05106 788 aa26.01■■□□□ 1.75
FOXA1-204ENST00000554607 CYP2F1P24903 491 aa26.01■■□□□ 1.75
FOXA1-204ENST00000554607 IFNAR2P48551 515 aa26.01■■□□□ 1.75
FOXA1-204ENST00000554607 GRIN1Q05586 938 aa26.01■■□□□ 1.75
FOXA1-204ENST00000554607 NR1H3Q13133 447 aa26.01■■□□□ 1.75
FOXA1-204ENST00000554607 SDHAF4Q5VUM1 108 aa26.01■■□□□ 1.75
FOXA1-204ENST00000554607 LARP1BQ659C4 914 aaKnown RBP26.01■■□□□ 1.75
FOXA1-204ENST00000554607 DYMQ7RTS9 669 aa26.01■■□□□ 1.75
FOXA1-204ENST00000554607 LRRC52Q8N7C0 313 aa26.01■■□□□ 1.75
FOXA1-204ENST00000554607 RPLP0P6Q8NHW5 317 aa26.01■■□□□ 1.75
FOXA1-204ENST00000554607 RIN3Q8TB24 985 aa26.01■■□□□ 1.75
FOXA1-204ENST00000554607 ACCSQ96QU6 501 aa26.01■■□□□ 1.75
FOXA1-204ENST00000554607 LSM14BQ9BX40 385 aaKnown RBP26.01■■□□□ 1.75
FOXA1-204ENST00000554607 DUSP15Q9H1R2 295 aaPredicted RBP26.01■■□□□ 1.75
FOXA1-204ENST00000554607 MRPL44Q9H9J2 332 aaKnown RBP26.01■■□□□ 1.75
FOXA1-204ENST00000554607 TRPC7Q9HCX4 862 aa26.01■■□□□ 1.75
FOXA1-204ENST00000554607 L1RE1Q9UN81 338 aa26.01■■□□□ 1.75
FOXA1-204ENST00000554607 CKMP06732 381 aa26■■□□□ 1.75
FOXA1-204ENST00000554607 SF3A1Q15459 793 aaKnown RBP26■■□□□ 1.75
FOXA1-204ENST00000554607 RNF43Q68DV7 783 aa26■■□□□ 1.75
FOXA1-204ENST00000554607 BRSK2Q8IWQ3 736 aa26■■□□□ 1.75
FOXA1-204ENST00000554607 FSIP1Q8NA03 581 aa26■■□□□ 1.75
FOXA1-204ENST00000554607 STKLD1Q8NE28 680 aa26■■□□□ 1.75
FOXA1-204ENST00000554607 STRA6Q9BX79 667 aa26■■□□□ 1.75
FOXA1-204ENST00000554607 IKZF4Q9H2S9 585 aa26■■□□□ 1.75
FOXA1-204ENST00000554607 STK17AQ9UEE5 414 aa26■■□□□ 1.75
FOXA1-204ENST00000554607 CCDC39Q9UFE4 941 aa26■■□□□ 1.75
FOXA1-204ENST00000554607 GTF3C4Q9UKN8 822 aa26■■□□□ 1.75
FOXA1-204ENST00000554607 TADA3O75528 432 aa25.99■■□□□ 1.75
FOXA1-204ENST00000554607 GAP43P17677 238 aa25.99■■□□□ 1.75
FOXA1-204ENST00000554607 LHX1P48742 406 aa25.99■■□□□ 1.75
FOXA1-204ENST00000554607 DMC1Q14565 340 aa25.99■■□□□ 1.75
FOXA1-204ENST00000554607 ZNF77Q15935 545 aa25.99■■□□□ 1.75
FOXA1-204ENST00000554607 CFAP221Q4G0U5 840 aa25.99■■□□□ 1.75
FOXA1-204ENST00000554607 SPATA2LQ8IUW3 424 aaPredicted RBP25.99■■□□□ 1.75
FOXA1-204ENST00000554607 CSGALNACT2Q8N6G5 542 aa25.99■■□□□ 1.75
FOXA1-204ENST00000554607 C1orf127Q8N9H9 656 aa25.99■■□□□ 1.75
FOXA1-204ENST00000554607 FUBP3Q96I24 572 aaKnown RBP eCLIP25.99■■□□□ 1.75
FOXA1-204ENST00000554607 POLR3BQ9NW08 1133 aaPredicted RBP25.99■■□□□ 1.75
FOXA1-204ENST00000554607 GDAP2Q9NXN4 497 aa25.99■■□□□ 1.75
FOXA1-204ENST00000554607 ITGA11Q9UKX5 1188 aa25.99■■□□□ 1.75
FOXA1-204ENST00000554607 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.99■■□□□ 1.75
FOXA1-204ENST00000554607 OBSL1O75147 1896 aa25.99■■□□□ 1.75
FOXA1-204ENST00000554607 KCNK5O95279 499 aa25.98■■□□□ 1.75
FOXA1-204ENST00000554607 ACAT1P24752 427 aaKnown RBP25.98■■□□□ 1.75
FOXA1-204ENST00000554607 PCSK1P29120 753 aa25.98■■□□□ 1.75
FOXA1-204ENST00000554607 PSMD2Q13200 908 aa25.98■■□□□ 1.75
FOXA1-204ENST00000554607 L1TD1Q5T7N2 865 aaKnown RBP25.98■■□□□ 1.75
FOXA1-204ENST00000554607 C11orf74Q86VG3 221 aa25.98■■□□□ 1.75
FOXA1-204ENST00000554607 TOP6BLQ8N6T0 577 aa25.98■■□□□ 1.75
FOXA1-204ENST00000554607 CYP2S1Q96SQ9 504 aa25.98■■□□□ 1.75
FOXA1-204ENST00000554607 PKMYT1Q99640 499 aa25.98■■□□□ 1.75
FOXA1-204ENST00000554607 SMOC1Q9H4F8 434 aa25.98■■□□□ 1.75
FOXA1-204ENST00000554607 RBAKQ9NYW8 714 aaPredicted RBP25.98■■□□□ 1.75
FOXA1-204ENST00000554607 PCDHB13Q9Y5F0 798 aa25.98■■□□□ 1.75
FOXA1-204ENST00000554607 EML5Q05BV3 1969 aa25.98■■□□□ 1.75
FOXA1-204ENST00000554607 GARTP22102 1010 aa25.97■■□□□ 1.75
FOXA1-204ENST00000554607 PDE6CP51160 858 aa25.97■■□□□ 1.75
FOXA1-204ENST00000554607 RBP5P82980 135 aa25.97■■□□□ 1.75
FOXA1-204ENST00000554607 USP4Q13107 963 aa25.97■■□□□ 1.75
FOXA1-204ENST00000554607 EML3Q32P44 896 aa25.97■■□□□ 1.75
FOXA1-204ENST00000554607 C8orf34Q49A92 452 aa25.97■■□□□ 1.75
FOXA1-204ENST00000554607 TTC16Q8NEE8 873 aa25.97■■□□□ 1.75
FOXA1-204ENST00000554607 EPSTI1Q96J88 318 aa25.97■■□□□ 1.75
FOXA1-204ENST00000554607 R3HCC1Q9Y3T6 440 aaKnown RBP25.97■■□□□ 1.75
FOXA1-204ENST00000554607 SNX9Q9Y5X1 595 aa25.97■■□□□ 1.75
FOXA1-204ENST00000554607 WNT6Q9Y6F9 365 aa25.97■■□□□ 1.75
FOXA1-204ENST00000554607 CAVIN2O95810 425 aa25.96■■□□□ 1.75
FOXA1-204ENST00000554607 KRT19P08727 400 aa25.96■■□□□ 1.75
FOXA1-204ENST00000554607 TCF3P15923 654 aa25.96■■□□□ 1.75
FOXA1-204ENST00000554607 CREB5Q02930 508 aa25.96■■□□□ 1.75
FOXA1-204ENST00000554607 KCNA1Q09470 495 aa25.96■■□□□ 1.75
FOXA1-204ENST00000554607 KCNB1Q14721 858 aa25.96■■□□□ 1.75
FOXA1-204ENST00000554607 NAIF1Q69YI7 327 aaPredicted RBP25.96■■□□□ 1.75
FOXA1-204ENST00000554607 SV2BQ7L1I2 683 aa25.96■■□□□ 1.75
FOXA1-204ENST00000554607 SCN4BQ8IWT1 228 aa25.96■■□□□ 1.75
FOXA1-204ENST00000554607 ADGRF2Q8IZF7 708 aa25.96■■□□□ 1.75
FOXA1-204ENST00000554607 SYCP3Q8IZU3 236 aa25.96■■□□□ 1.75
FOXA1-204ENST00000554607 SAAL1Q96ER3 474 aa25.96■■□□□ 1.75
FOXA1-204ENST00000554607 SLC22A12Q96S37 553 aa25.96■■□□□ 1.75
FOXA1-204ENST00000554607 USP24Q9UPU5 2620 aa25.96■■□□□ 1.75
FOXA1-204ENST00000554607 BCLAF3A2AJT9 711 aaKnown RBP25.95■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms