RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 RARBP10826 455 aa6.98□□□□□ -1.29
SCFD1-212ENST00000554486 MUTP22033 750 aa6.98□□□□□ -1.29
SCFD1-212ENST00000554486 HSD3B2P26439 372 aa6.98□□□□□ -1.29
SCFD1-212ENST00000554486 STAT6P42226 847 aa6.98□□□□□ -1.29
SCFD1-212ENST00000554486 QARSP47897 775 aaKnown RBP6.98□□□□□ -1.29
SCFD1-212ENST00000554486 PSMC5P62195 406 aa6.98□□□□□ -1.29
SCFD1-212ENST00000554486 BEX3Q00994 111 aa6.98□□□□□ -1.29
SCFD1-212ENST00000554486 KCNAB2Q13303 367 aa6.98□□□□□ -1.29
SCFD1-212ENST00000554486 ZRSR1Q15695 479 aaKnown RBP6.98□□□□□ -1.29
SCFD1-212ENST00000554486 PKN2Q16513 984 aaKnown RBP6.98□□□□□ -1.29
SCFD1-212ENST00000554486 LONRF3Q496Y0 759 aa6.98□□□□□ -1.29
SCFD1-212ENST00000554486 UTP14CQ5TAP6 766 aaKnown RBP6.98□□□□□ -1.29
SCFD1-212ENST00000554486 RRAGBQ5VZM2 374 aa6.98□□□□□ -1.29
SCFD1-212ENST00000554486 RSPO2Q6UXX9 243 aaPredicted RBP6.98□□□□□ -1.29
SCFD1-212ENST00000554486 SYDE1Q6ZW31 735 aaPredicted RBP6.98□□□□□ -1.29
SCFD1-212ENST00000554486 TPH2Q8IWU9 490 aa6.98□□□□□ -1.29
SCFD1-212ENST00000554486 C4orf19Q8IY42 314 aa6.98□□□□□ -1.29
SCFD1-212ENST00000554486 KLHDC9Q8NEP7 349 aa6.98□□□□□ -1.29
SCFD1-212ENST00000554486 AFAP1L1Q8TED9 768 aa6.98□□□□□ -1.29
SCFD1-212ENST00000554486 PIGOQ8TEQ8 1089 aa6.98□□□□□ -1.29
SCFD1-212ENST00000554486 CALML4Q96GE6 196 aa6.98□□□□□ -1.29
SCFD1-212ENST00000554486 DIRC2Q96SL1 478 aa6.98□□□□□ -1.29
SCFD1-212ENST00000554486 C16orf70Q9BSU1 422 aa6.98□□□□□ -1.29
SCFD1-212ENST00000554486 MRPL4Q9BYD3 311 aaKnown RBP6.98□□□□□ -1.29
SCFD1-212ENST00000554486 RNF32Q9H0A6 362 aa6.98□□□□□ -1.29
SCFD1-212ENST00000554486 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.98□□□□□ -1.29
SCFD1-212ENST00000554486 AP5M1Q9H0R1 490 aa6.98□□□□□ -1.29
SCFD1-212ENST00000554486 SLC6A17Q9H1V8 727 aa6.98□□□□□ -1.29
SCFD1-212ENST00000554486 EPB41L4BQ9H329 900 aa6.98□□□□□ -1.29
SCFD1-212ENST00000554486 DDX19AQ9NUU7 478 aaKnown RBP6.98□□□□□ -1.29
SCFD1-212ENST00000554486 DACT1Q9NYF0 836 aa6.98□□□□□ -1.29
SCFD1-212ENST00000554486 GULP1Q9UBP9 304 aa6.98□□□□□ -1.29
SCFD1-212ENST00000554486 ARID2Q68CP9 1835 aa6.98□□□□□ -1.29
SCFD1-212ENST00000554486 EMSYQ7Z589 1322 aa6.98□□□□□ -1.29
SCFD1-212ENST00000554486 EVPLQ92817 2033 aa6.98□□□□□ -1.29
SCFD1-212ENST00000554486 TMEM150BA6NC51 233 aa6.97□□□□□ -1.29
SCFD1-212ENST00000554486 E9PMD0 336 aa6.97□□□□□ -1.29
SCFD1-212ENST00000554486 PPFIA4O75335 1185 aa6.97□□□□□ -1.29
SCFD1-212ENST00000554486 EYA4O95677 639 aa6.97□□□□□ -1.29
SCFD1-212ENST00000554486 MBD3O95983 291 aa6.97□□□□□ -1.29
SCFD1-212ENST00000554486 ZNF286BP0CG31 522 aa6.97□□□□□ -1.29
SCFD1-212ENST00000554486 CCL5P13501 91 aa6.97□□□□□ -1.29
SCFD1-212ENST00000554486 PTMSP20962 102 aa6.97□□□□□ -1.29
SCFD1-212ENST00000554486 MARK3P27448 753 aa6.97□□□□□ -1.29
SCFD1-212ENST00000554486 CST5P28325 142 aaPredicted RBP6.97□□□□□ -1.29
SCFD1-212ENST00000554486 RAP1GAPP47736 663 aa6.97□□□□□ -1.29
SCFD1-212ENST00000554486 STAT5BP51692 787 aa6.97□□□□□ -1.29
SCFD1-212ENST00000554486 GABREP78334 506 aa6.97□□□□□ -1.29
SCFD1-212ENST00000554486 PRKCEQ02156 737 aa6.97□□□□□ -1.29
SCFD1-212ENST00000554486 SLC14A2Q15849 920 aa6.97□□□□□ -1.29
SCFD1-212ENST00000554486 ZNF124Q15973 351 aa6.97□□□□□ -1.29
SCFD1-212ENST00000554486 FSCN1Q16658 493 aaKnown RBP6.97□□□□□ -1.29
SCFD1-212ENST00000554486 DGKDQ16760 1214 aa6.97□□□□□ -1.29
SCFD1-212ENST00000554486 C21orf62-AS1Q17RA5 79 aa6.97□□□□□ -1.29
SCFD1-212ENST00000554486 FAM160B1Q5W0V3 765 aa6.97□□□□□ -1.29
SCFD1-212ENST00000554486 CCSAPQ6IQ19 270 aaPredicted RBP6.97□□□□□ -1.29
SCFD1-212ENST00000554486 GALNT18Q6P9A2 607 aa6.97□□□□□ -1.29
SCFD1-212ENST00000554486 KRBA2Q6ZNG9 492 aa6.97□□□□□ -1.29
SCFD1-212ENST00000554486 ANO5Q75V66 913 aa6.97□□□□□ -1.29
SCFD1-212ENST00000554486 PLPPR4Q7Z2D5 763 aa6.97□□□□□ -1.29
SCFD1-212ENST00000554486 FGD2Q7Z6J4 655 aa6.97□□□□□ -1.29
SCFD1-212ENST00000554486 JAMLQ86YT9 394 aa6.97□□□□□ -1.29
SCFD1-212ENST00000554486 GRAMD1CQ8IYS0 662 aa6.97□□□□□ -1.29
SCFD1-212ENST00000554486 Q8N1Y9 231 aa6.97□□□□□ -1.29
SCFD1-212ENST00000554486 IQUBQ8NA54 791 aa6.97□□□□□ -1.29
SCFD1-212ENST00000554486 PLEKHO2Q8TD55 490 aa6.97□□□□□ -1.29
SCFD1-212ENST00000554486 RAD54LQ92698 747 aa6.97□□□□□ -1.29
SCFD1-212ENST00000554486 KAT2BQ92831 832 aa6.97□□□□□ -1.29
SCFD1-212ENST00000554486 ATP6V0A1Q93050 837 aa6.97□□□□□ -1.29
SCFD1-212ENST00000554486 CDK5RAP3Q96JB5 506 aa6.97□□□□□ -1.29
SCFD1-212ENST00000554486 ZNF333Q96JL9 665 aa6.97□□□□□ -1.29
SCFD1-212ENST00000554486 NT5C3AQ9H0P0 336 aa6.97□□□□□ -1.29
SCFD1-212ENST00000554486 SMARCAD1Q9H4L7 1026 aa6.97□□□□□ -1.29
SCFD1-212ENST00000554486 XPNPEP3Q9NQH7 507 aa6.97□□□□□ -1.29
SCFD1-212ENST00000554486 ZNF302Q9NR11 478 aa6.97□□□□□ -1.29
SCFD1-212ENST00000554486 PPARGC1AQ9UBK2 798 aaKnown RBP6.97□□□□□ -1.29
SCFD1-212ENST00000554486 USP25Q9UHP3 1055 aa6.97□□□□□ -1.29
SCFD1-212ENST00000554486 PCDHA2Q9Y5H9 948 aa6.97□□□□□ -1.29
SCFD1-212ENST00000554486 MYH11P35749 1972 aa6.97□□□□□ -1.29
SCFD1-212ENST00000554486 MYMKA6NI61 221 aa6.96□□□□□ -1.3
SCFD1-212ENST00000554486 HAS3O00219 553 aa6.96□□□□□ -1.3
SCFD1-212ENST00000554486 DKC1O60832 514 aaKnown RBP eCLIP6.96□□□□□ -1.3
SCFD1-212ENST00000554486 KINO60870 393 aaKnown RBP6.96□□□□□ -1.3
SCFD1-212ENST00000554486 F2P00734 622 aa6.96□□□□□ -1.3
SCFD1-212ENST00000554486 MYL3P08590 195 aa6.96□□□□□ -1.3
SCFD1-212ENST00000554486 PLA2G4BP0C869 781 aa6.96□□□□□ -1.3
SCFD1-212ENST00000554486 XRCC6P12956 609 aaKnown RBP eCLIP6.96□□□□□ -1.3
SCFD1-212ENST00000554486 PRKCAP17252 672 aa6.96□□□□□ -1.3
SCFD1-212ENST00000554486 BCL6P41182 706 aa6.96□□□□□ -1.3
SCFD1-212ENST00000554486 CPT1AP50416 773 aa6.96□□□□□ -1.3
SCFD1-212ENST00000554486 SLC12A3P55017 1021 aa6.96□□□□□ -1.3
SCFD1-212ENST00000554486 NPEPPSP55786 919 aa6.96□□□□□ -1.3
SCFD1-212ENST00000554486 PURAQ00577 322 aaKnown RBP6.96□□□□□ -1.3
SCFD1-212ENST00000554486 PLCB4Q15147 1175 aa6.96□□□□□ -1.3
SCFD1-212ENST00000554486 LRRC41Q15345 812 aa6.96□□□□□ -1.3
SCFD1-212ENST00000554486 TCEA2Q15560 299 aa6.96□□□□□ -1.3
SCFD1-212ENST00000554486 TARBP2Q15633 366 aaKnown RBP6.96□□□□□ -1.3
SCFD1-212ENST00000554486 KCNA10Q16322 511 aa6.96□□□□□ -1.3
SCFD1-212ENST00000554486 KLHL40Q2TBA0 621 aa6.96□□□□□ -1.3
SCFD1-212ENST00000554486 FNDC3BQ53EP0 1204 aaKnown RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms