RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 RFC1P35251 1148 aaPredicted RBP12.33□□□□□ -0.44
SHMT2-212ENST00000554467 PTGIRP43119 386 aa12.33□□□□□ -0.44
SHMT2-212ENST00000554467 RGS7P49802 495 aa12.33□□□□□ -0.44
SHMT2-212ENST00000554467 SNX17Q15036 470 aa12.33□□□□□ -0.44
SHMT2-212ENST00000554467 FAM47CQ5HY64 1035 aa12.33□□□□□ -0.44
SHMT2-212ENST00000554467 GNASQ5JWF2 1037 aa12.33□□□□□ -0.44
SHMT2-212ENST00000554467 C7orf31Q8N865 590 aa12.33□□□□□ -0.44
SHMT2-212ENST00000554467 RUBCNQ92622 972 aa12.33□□□□□ -0.44
SHMT2-212ENST00000554467 MRPL45Q9BRJ2 306 aaKnown RBP12.33□□□□□ -0.44
SHMT2-212ENST00000554467 ERP44Q9BS26 406 aa12.33□□□□□ -0.44
SHMT2-212ENST00000554467 KIF9Q9HAQ2 790 aa12.33□□□□□ -0.44
SHMT2-212ENST00000554467 ZFYVE28Q9HCC9 887 aa12.33□□□□□ -0.44
SHMT2-212ENST00000554467 CILPO75339 1184 aa12.33□□□□□ -0.44
SHMT2-212ENST00000554467 MICAL2O94851 1124 aa12.33□□□□□ -0.44
SHMT2-212ENST00000554467 SLC10A3P09131 477 aa12.33□□□□□ -0.44
SHMT2-212ENST00000554467 ATF7P17544 494 aaPredicted RBP12.33□□□□□ -0.44
SHMT2-212ENST00000554467 CYP3A5P20815 502 aa12.33□□□□□ -0.44
SHMT2-212ENST00000554467 IGFBP6P24592 240 aaPredicted RBP12.33□□□□□ -0.44
SHMT2-212ENST00000554467 PSMC1P62191 440 aaKnown RBP12.33□□□□□ -0.44
SHMT2-212ENST00000554467 SARNPP82979 210 aaKnown RBP12.33□□□□□ -0.44
SHMT2-212ENST00000554467 UAP1Q16222 522 aaPredicted RBP12.33□□□□□ -0.44
SHMT2-212ENST00000554467 KCNT1Q5JUK3 1230 aa12.33□□□□□ -0.44
SHMT2-212ENST00000554467 CYP4F22Q6NT55 531 aa12.33□□□□□ -0.44
SHMT2-212ENST00000554467 SLC27A1Q6PCB7 646 aa12.33□□□□□ -0.44
SHMT2-212ENST00000554467 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.33□□□□□ -0.44
SHMT2-212ENST00000554467 UHMK1Q8TAS1 419 aaKnown RBP12.33□□□□□ -0.44
SHMT2-212ENST00000554467 TMEM176AQ96HP8 235 aa12.33□□□□□ -0.44
SHMT2-212ENST00000554467 APBA2Q99767 749 aa12.33□□□□□ -0.44
SHMT2-212ENST00000554467 ATP8A1Q9Y2Q0 1164 aa12.33□□□□□ -0.44
SHMT2-212ENST00000554467 TMEM191CA6NGB0 347 aa12.32□□□□□ -0.44
SHMT2-212ENST00000554467 FAM155AB1AL88 458 aaPredicted RBP12.32□□□□□ -0.44
SHMT2-212ENST00000554467 ATP2C2O75185 946 aa12.32□□□□□ -0.44
SHMT2-212ENST00000554467 ERBB2P04626 1255 aa12.32□□□□□ -0.44
SHMT2-212ENST00000554467 HSD17B3P37058 310 aa12.32□□□□□ -0.44
SHMT2-212ENST00000554467 COILP38432 576 aaPredicted RBP12.32□□□□□ -0.44
SHMT2-212ENST00000554467 RPL21P46778 160 aaKnown RBP12.32□□□□□ -0.44
SHMT2-212ENST00000554467 CPT1AP50416 773 aa12.32□□□□□ -0.44
SHMT2-212ENST00000554467 DHX9Q08211 1270 aaKnown RBP12.32□□□□□ -0.44
SHMT2-212ENST00000554467 QPCTQ16769 361 aa12.32□□□□□ -0.44
SHMT2-212ENST00000554467 ACOT1Q86TX2 421 aa12.32□□□□□ -0.44
SHMT2-212ENST00000554467 FBXO25Q8TCJ0 367 aa12.32□□□□□ -0.44
SHMT2-212ENST00000554467 PIWIL1Q96J94 861 aaKnown RBP12.32□□□□□ -0.44
SHMT2-212ENST00000554467 MTUS1Q9ULD2 1270 aa12.32□□□□□ -0.44
SHMT2-212ENST00000554467 SCINQ9Y6U3 715 aa12.32□□□□□ -0.44
SHMT2-212ENST00000554467 MEIS3P2A8K0S8 358 aa12.32□□□□□ -0.44
SHMT2-212ENST00000554467 GRM5P41594 1212 aa12.32□□□□□ -0.44
SHMT2-212ENST00000554467 RBP5P82980 135 aa12.32□□□□□ -0.44
SHMT2-212ENST00000554467 CUL1Q13616 776 aa12.32□□□□□ -0.44
SHMT2-212ENST00000554467 BYSLQ13895 437 aaKnown RBP12.32□□□□□ -0.44
SHMT2-212ENST00000554467 RAB6CQ53S08 254 aa12.32□□□□□ -0.44
SHMT2-212ENST00000554467 NOTUMQ6P988 496 aa12.32□□□□□ -0.44
SHMT2-212ENST00000554467 MAGEC3Q8TD91 643 aa12.32□□□□□ -0.44
SHMT2-212ENST00000554467 RAB6CQ9H0N0 254 aa12.32□□□□□ -0.44
SHMT2-212ENST00000554467 ZWILCHQ9H900 591 aa12.32□□□□□ -0.44
SHMT2-212ENST00000554467 METTL5Q9NRN9 209 aaKnown RBP12.32□□□□□ -0.44
SHMT2-212ENST00000554467 DNAJC17Q9NVM6 304 aaKnown RBP12.32□□□□□ -0.44
SHMT2-212ENST00000554467 NME7Q9Y5B8 376 aa12.32□□□□□ -0.44
SHMT2-212ENST00000554467 MBLAC1A4D2B0 266 aaPredicted RBP12.31□□□□□ -0.44
SHMT2-212ENST00000554467 CALB1P05937 261 aa12.31□□□□□ -0.44
SHMT2-212ENST00000554467 PDGFRBP09619 1106 aa12.31□□□□□ -0.44
SHMT2-212ENST00000554467 CCDC142Q17RM4 750 aa12.31□□□□□ -0.44
SHMT2-212ENST00000554467 ZNF618Q5T7W0 954 aa12.31□□□□□ -0.44
SHMT2-212ENST00000554467 EMC10Q5UCC4 262 aa12.31□□□□□ -0.44
SHMT2-212ENST00000554467 DUPD1Q68J44 220 aa12.31□□□□□ -0.44
SHMT2-212ENST00000554467 IQCKQ8N0W5 287 aa12.31□□□□□ -0.44
SHMT2-212ENST00000554467 TRIB2Q92519 343 aa12.31□□□□□ -0.44
SHMT2-212ENST00000554467 WNT8BQ93098 351 aa12.31□□□□□ -0.44
SHMT2-212ENST00000554467 CCDC114Q96M63 670 aa12.31□□□□□ -0.44
SHMT2-212ENST00000554467 SMIM35A0A1B0GVV1 85 aa12.31□□□□□ -0.44
SHMT2-212ENST00000554467 C17orf102A2RUQ5 167 aa12.31□□□□□ -0.44
SHMT2-212ENST00000554467 CHRNA3P32297 505 aa12.31□□□□□ -0.44
SHMT2-212ENST00000554467 PURAQ00577 322 aaKnown RBP12.31□□□□□ -0.44
SHMT2-212ENST00000554467 NAA25Q14CX7 972 aa12.31□□□□□ -0.44
SHMT2-212ENST00000554467 PPP1R7Q15435 360 aa12.31□□□□□ -0.44
SHMT2-212ENST00000554467 CCDC25Q86WR0 208 aa12.31□□□□□ -0.44
SHMT2-212ENST00000554467 RHOT1Q8IXI2 618 aa12.31□□□□□ -0.44
SHMT2-212ENST00000554467 VCPIP1Q96JH7 1222 aa12.31□□□□□ -0.44
SHMT2-212ENST00000554467 SNX27Q96L92 541 aa12.31□□□□□ -0.44
SHMT2-212ENST00000554467 PCSK1NQ9UHG2 260 aa12.31□□□□□ -0.44
SHMT2-212ENST00000554467 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.31□□□□□ -0.44
SHMT2-212ENST00000554467 E7EVH7 732 aa12.31□□□□□ -0.44
SHMT2-212ENST00000554467 LSM8O95777 96 aaKnown RBP12.31□□□□□ -0.44
SHMT2-212ENST00000554467 FAM107AO95990 144 aa12.31□□□□□ -0.44
SHMT2-212ENST00000554467 CDC25CP30307 473 aa12.31□□□□□ -0.44
SHMT2-212ENST00000554467 FLT3LGP49771 235 aa12.31□□□□□ -0.44
SHMT2-212ENST00000554467 YARSP54577 528 aaKnown RBP12.31□□□□□ -0.44
SHMT2-212ENST00000554467 SH3PXD2AQ5TCZ1 1133 aa12.31□□□□□ -0.44
SHMT2-212ENST00000554467 ALS2CLQ60I27 953 aa12.31□□□□□ -0.44
SHMT2-212ENST00000554467 ARRDC4Q8NCT1 418 aa12.31□□□□□ -0.44
SHMT2-212ENST00000554467 RAPGEF5Q92565 580 aa12.31□□□□□ -0.44
SHMT2-212ENST00000554467 ZFP42Q96MM3 310 aa12.31□□□□□ -0.44
SHMT2-212ENST00000554467 DPEP3Q9H4B8 488 aa12.31□□□□□ -0.44
SHMT2-212ENST00000554467 ITGA11Q9UKX5 1188 aa12.31□□□□□ -0.44
SHMT2-212ENST00000554467 TRPM7Q96QT4 1865 aa12.31□□□□□ -0.44
SHMT2-212ENST00000554467 TCRBV5S1A1TA0A578 114 aa12.3□□□□□ -0.44
SHMT2-212ENST00000554467 TLDC2A0PJX2 215 aa12.3□□□□□ -0.44
SHMT2-212ENST00000554467 KRT1P04264 644 aa12.3□□□□□ -0.44
SHMT2-212ENST00000554467 KRT3P12035 628 aa12.3□□□□□ -0.44
SHMT2-212ENST00000554467 ELNP15502 786 aa12.3□□□□□ -0.44
SHMT2-212ENST00000554467 NR1D1P20393 614 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms