RNA–Protein interactions for RNA: ENST00000554439.5

PRPF39-207, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,982 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-207ENST00000554439 TRIM8Q9BZR9 551 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 GPR88Q9GZN0 384 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 RAB17Q9H0T7 212 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 PIDD1Q9HB75 910 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 KCNK9Q9NPC2 374 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 ACP6Q9NPH0 428 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 TJP2Q9UDY2 1190 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 TBK1Q9UHD2 729 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 STARD13Q9Y3M8 1113 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 USP15Q9Y4E8 981 aaPredicted RBP2.73□□□□□ -1.97
PRPF39-207ENST00000554439 PCDHA3Q9Y5H8 950 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 ARFGEF1Q9Y6D6 1849 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 DDX60LQ5H9U9 1706 aaKnown RBP2.73□□□□□ -1.97
PRPF39-207ENST00000554439 ASTN1O14525 1302 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 PFASO15067 1338 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 TRBV23-1A0A0A0MS06 115 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 DPPA5A6NC42 116 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 CFAP73A6NFT4 308 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 LINC01387J3KSC0 135 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 TP73O15350 636 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 AGTP01019 485 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 NR3C1P04150 777 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 PGRP06401 933 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 ITGAVP06756 1048 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 TRIM49P0CI25 452 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 TRIM49CP0CI26 452 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 PYGMP11217 842 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 CETPP11597 493 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 ATP2A2P16615 1042 aaKnown RBP2.73□□□□□ -1.97
PRPF39-207ENST00000554439 CHRNB2P17787 502 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 POU3F2P20265 443 aaPredicted RBP2.73□□□□□ -1.97
PRPF39-207ENST00000554439 PRKCIP41743 596 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 PDE6CP51160 858 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 ZNF143P52747 638 aaPredicted RBP2.73□□□□□ -1.97
PRPF39-207ENST00000554439 SNAP25P60880 206 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 MAP2K1Q02750 393 aaPredicted RBP2.73□□□□□ -1.97
PRPF39-207ENST00000554439 BNIP1Q12981 228 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 GIT2Q14161 759 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 CTTNQ14247 550 aaKnown RBP2.73□□□□□ -1.97
PRPF39-207ENST00000554439 DRAP1Q14919 205 aaPredicted RBP2.73□□□□□ -1.97
PRPF39-207ENST00000554439 POU4F3Q15319 338 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 TAF11Q15544 211 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 SEPT7Q16181 437 aaKnown RBP2.73□□□□□ -1.97
PRPF39-207ENST00000554439 KNOP1Q1ED39 458 aaKnown RBP2.73□□□□□ -1.97
PRPF39-207ENST00000554439 KRTAP19-4Q3LI73 84 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 SV2CQ496J9 727 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 CBWD6Q4V339 395 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 ZC2HC1CQ53FD0 456 aaPredicted RBP2.73□□□□□ -1.97
PRPF39-207ENST00000554439 PARP10Q53GL7 1025 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 PRRT3Q5FWE3 981 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 CBWD3Q5JTY5 395 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 CBWD5Q5RIA9 395 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 C10orf76Q5T2E6 689 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 CCDC137Q6PK04 289 aaKnown RBP2.73□□□□□ -1.97
PRPF39-207ENST00000554439 ARHGAP27Q6ZUM4 889 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 FAM47EQ6ZV65 393 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 KCTD1Q719H9 257 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 ILDR2Q71H61 639 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 ASRGL1Q7L266 308 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 CATSPER3Q86XQ3 398 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 EGFL6Q8IUX8 553 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 ZC3H3Q8IXZ2 948 aaKnown RBP2.73□□□□□ -1.97
PRPF39-207ENST00000554439 ADGRF4Q8IZF3 695 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 SYCE1Q8N0S2 351 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 TBC1D16Q8TBP0 767 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 RFFLQ8WZ73 363 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 ARHGEF2Q92974 986 aaKnown RBP2.73□□□□□ -1.97
PRPF39-207ENST00000554439 RELTQ969Z4 430 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 SLC35C1Q96A29 364 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 ELMO3Q96BJ8 720 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 SLC6A18Q96N87 628 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 P2RX7Q99572 595 aaKnown RBP2.73□□□□□ -1.97
PRPF39-207ENST00000554439 CORO1BQ9BR76 489 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 MRPL4Q9BYD3 311 aaKnown RBP2.73□□□□□ -1.97
PRPF39-207ENST00000554439 RAB34Q9BZG1 259 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 ZCWPW1Q9H0M4 648 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 CDC42EP4Q9H3Q1 356 aaKnown RBP2.73□□□□□ -1.97
PRPF39-207ENST00000554439 RIOX1Q9H6W3 641 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 ARHGEF3Q9NR81 526 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 FAM86C1Q9NVL1 165 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 SUCOQ9UBS9 1254 aaKnown RBP2.73□□□□□ -1.97
PRPF39-207ENST00000554439 HIF3AQ9Y2N7 669 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 CSADQ9Y600 493 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 ALG6Q9Y672 507 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 BZW2Q9Y6E2 419 aaKnown RBP2.73□□□□□ -1.97
PRPF39-207ENST00000554439 KIF13BQ9NQT8 1826 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 A0A0A6YYK5 440 aaPredicted RBP2.72□□□□□ -1.97
PRPF39-207ENST00000554439 TRAV20A0A0B4J274 112 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 GOLGA6L10A0A0M3HER8 536 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 H0Y3Z8 333 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 MPHOSPH10O00566 681 aaKnown RBP2.72□□□□□ -1.97
PRPF39-207ENST00000554439 SHOXO15266 292 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 PHF2O75151 1096 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 SUN1O94901 812 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 GCNT3O95395 438 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 SCGB1D2O95969 90 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 CALCAP01258 141 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 DLATP10515 647 aaKnown RBP2.72□□□□□ -1.97
PRPF39-207ENST00000554439 CCND1P24385 295 aa2.72□□□□□ -1.97
PRPF39-207ENST00000554439 NMT1P30419 496 aaKnown RBP2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms