RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 CCDC163A0A0D9SF12 145 aa7.6□□□□□ -1.19
ATXN3-224ENST00000554040 C4orf47A7E2U8 309 aa7.6□□□□□ -1.19
ATXN3-224ENST00000554040 ZNF263O14978 683 aa7.6□□□□□ -1.19
ATXN3-224ENST00000554040 ASAP2O43150 1006 aa7.6□□□□□ -1.19
ATXN3-224ENST00000554040 EDIL3O43854 480 aa7.6□□□□□ -1.19
ATXN3-224ENST00000554040 GAS7O60861 476 aa7.6□□□□□ -1.19
ATXN3-224ENST00000554040 RPP40O75818 363 aaKnown RBP7.6□□□□□ -1.19
ATXN3-224ENST00000554040 ABL1P00519 1130 aa7.6□□□□□ -1.19
ATXN3-224ENST00000554040 CEACAM1P13688 526 aa7.6□□□□□ -1.19
ATXN3-224ENST00000554040 PTPN2P17706 415 aa7.6□□□□□ -1.19
ATXN3-224ENST00000554040 AKAP5P24588 427 aa7.6□□□□□ -1.19
ATXN3-224ENST00000554040 OR1D2P34982 312 aa7.6□□□□□ -1.19
ATXN3-224ENST00000554040 ADMP35318 185 aa7.6□□□□□ -1.19
ATXN3-224ENST00000554040 GSTM4Q03013 218 aa7.6□□□□□ -1.19
ATXN3-224ENST00000554040 NCBP1Q09161 790 aaKnown RBP7.6□□□□□ -1.19
ATXN3-224ENST00000554040 LAMTOR4Q0VGL1 99 aa7.6□□□□□ -1.19
ATXN3-224ENST00000554040 GRIK3Q13003 919 aa7.6□□□□□ -1.19
ATXN3-224ENST00000554040 HSP90AA2PQ14568 343 aaPredicted RBP7.6□□□□□ -1.19
ATXN3-224ENST00000554040 PCBP1Q15365 356 aaKnown RBP eCLIP7.6□□□□□ -1.19
ATXN3-224ENST00000554040 SPRED3Q2MJR0 410 aa7.6□□□□□ -1.19
ATXN3-224ENST00000554040 DGKKQ5KSL6 1271 aa7.6□□□□□ -1.19
ATXN3-224ENST00000554040 DAB2IPQ5VWQ8 1189 aa7.6□□□□□ -1.19
ATXN3-224ENST00000554040 B4GALNT3Q6L9W6 998 aa7.6□□□□□ -1.19
ATXN3-224ENST00000554040 NOTUMQ6P988 496 aa7.6□□□□□ -1.19
ATXN3-224ENST00000554040 PDXDC1Q6P996 788 aa7.6□□□□□ -1.19
ATXN3-224ENST00000554040 VITQ6UXI7 678 aa7.6□□□□□ -1.19
ATXN3-224ENST00000554040 Q6ZS52 159 aa7.6□□□□□ -1.19
ATXN3-224ENST00000554040 ANO5Q75V66 913 aa7.6□□□□□ -1.19
ATXN3-224ENST00000554040 SGMS1Q86VZ5 419 aa7.6□□□□□ -1.19
ATXN3-224ENST00000554040 CHD1LQ86WJ1 897 aa7.6□□□□□ -1.19
ATXN3-224ENST00000554040 MICU3Q86XE3 530 aa7.6□□□□□ -1.19
ATXN3-224ENST00000554040 MFSD6LQ8IWD5 586 aa7.6□□□□□ -1.19
ATXN3-224ENST00000554040 GALNT12Q8IXK2 581 aa7.6□□□□□ -1.19
ATXN3-224ENST00000554040 FBLIM1Q8WUP2 373 aa7.6□□□□□ -1.19
ATXN3-224ENST00000554040 DEPDC1BQ8WUY9 529 aa7.6□□□□□ -1.19
ATXN3-224ENST00000554040 PRPF31Q8WWY3 499 aaKnown RBP7.6□□□□□ -1.19
ATXN3-224ENST00000554040 RUFY2Q8WXA3 655 aa7.6□□□□□ -1.19
ATXN3-224ENST00000554040 PSPC1Q8WXF1 523 aaKnown RBP7.6□□□□□ -1.19
ATXN3-224ENST00000554040 EZH1Q92800 747 aaPredicted RBP7.6□□□□□ -1.19
ATXN3-224ENST00000554040 SLC5A5Q92911 643 aa7.6□□□□□ -1.19
ATXN3-224ENST00000554040 SMARCD2Q92925 531 aa7.6□□□□□ -1.19
ATXN3-224ENST00000554040 TCEAL4Q96EI5 215 aa7.6□□□□□ -1.19
ATXN3-224ENST00000554040 MSANTD3Q96H12 275 aa7.6□□□□□ -1.19
ATXN3-224ENST00000554040 ZC3H10Q96K80 434 aaKnown RBP7.6□□□□□ -1.19
ATXN3-224ENST00000554040 ASB16Q96NS5 453 aa7.6□□□□□ -1.19
ATXN3-224ENST00000554040 PAAF1Q9BRP4 392 aa7.6□□□□□ -1.19
ATXN3-224ENST00000554040 APOL6Q9BWW8 343 aa7.6□□□□□ -1.19
ATXN3-224ENST00000554040 TEKT3Q9BXF9 490 aa7.6□□□□□ -1.19
ATXN3-224ENST00000554040 CSRNP2Q9H175 543 aa7.6□□□□□ -1.19
ATXN3-224ENST00000554040 C8orf33Q9H7E9 229 aaPredicted RBP7.6□□□□□ -1.19
ATXN3-224ENST00000554040 ADGRE2Q9UHX3 823 aa7.6□□□□□ -1.19
ATXN3-224ENST00000554040 NOTCH4Q99466 2003 aa7.6□□□□□ -1.19
ATXN3-224ENST00000554040 BPTFQ12830 3046 aa7.6□□□□□ -1.19
ATXN3-224ENST00000554040 AKAP13Q12802 2813 aa7.6□□□□□ -1.19
ATXN3-224ENST00000554040 A0A096LPE4 126 aa7.59□□□□□ -1.19
ATXN3-224ENST00000554040 A0A1W2PPZ6 126 aa7.59□□□□□ -1.19
ATXN3-224ENST00000554040 ARHGEF37A1IGU5 675 aa7.59□□□□□ -1.19
ATXN3-224ENST00000554040 ARNTLO00327 626 aa7.59□□□□□ -1.19
ATXN3-224ENST00000554040 ZNF197O14709 1029 aa7.59□□□□□ -1.19
ATXN3-224ENST00000554040 ADAMTS3O15072 1205 aa7.59□□□□□ -1.19
ATXN3-224ENST00000554040 TSPAN1O60635 241 aa7.59□□□□□ -1.19
ATXN3-224ENST00000554040 PSMD10O75832 226 aa7.59□□□□□ -1.19
ATXN3-224ENST00000554040 ERLIN2O94905 339 aa7.59□□□□□ -1.19
ATXN3-224ENST00000554040 WNT11O96014 354 aa7.59□□□□□ -1.19
ATXN3-224ENST00000554040 CSRP1P21291 193 aaKnown RBP7.59□□□□□ -1.19
ATXN3-224ENST00000554040 MPLP40238 635 aa7.59□□□□□ -1.19
ATXN3-224ENST00000554040 RBM25P49756 843 aaKnown RBP7.59□□□□□ -1.19
ATXN3-224ENST00000554040 SOX4Q06945 474 aaPredicted RBP7.59□□□□□ -1.19
ATXN3-224ENST00000554040 PCDH1Q08174 1060 aa7.59□□□□□ -1.19
ATXN3-224ENST00000554040 SPIRE1Q08AE8 756 aa7.59□□□□□ -1.19
ATXN3-224ENST00000554040 ELAVL2Q12926 359 aaKnown RBP7.59□□□□□ -1.19
ATXN3-224ENST00000554040 LRCH2Q5VUJ6 765 aa7.59□□□□□ -1.19
ATXN3-224ENST00000554040 TCEAL6Q6IPX3 200 aa7.59□□□□□ -1.19
ATXN3-224ENST00000554040 B3GNT9Q6UX72 402 aa7.59□□□□□ -1.19
ATXN3-224ENST00000554040 SYNE3Q6ZMZ3 975 aa7.59□□□□□ -1.19
ATXN3-224ENST00000554040 MIER3Q7Z3K6 550 aa7.59□□□□□ -1.19
ATXN3-224ENST00000554040 SMC5Q8IY18 1101 aa7.59□□□□□ -1.19
ATXN3-224ENST00000554040 EXOC8Q8IYI6 725 aa7.59□□□□□ -1.19
ATXN3-224ENST00000554040 HACE1Q8IYU2 909 aa7.59□□□□□ -1.19
ATXN3-224ENST00000554040 SYNPOQ8N3V7 929 aa7.59□□□□□ -1.19
ATXN3-224ENST00000554040 RNF149Q8NC42 400 aa7.59□□□□□ -1.19
ATXN3-224ENST00000554040 HASPINQ8TF76 798 aa7.59□□□□□ -1.19
ATXN3-224ENST00000554040 TCEAL3Q969E4 200 aa7.59□□□□□ -1.19
ATXN3-224ENST00000554040 GJA10Q969M2 543 aa7.59□□□□□ -1.19
ATXN3-224ENST00000554040 TMEM143Q96AN5 459 aa7.59□□□□□ -1.19
ATXN3-224ENST00000554040 CPB2Q96IY4 423 aa7.59□□□□□ -1.19
ATXN3-224ENST00000554040 ZSWIM3Q96MP5 696 aa7.59□□□□□ -1.19
ATXN3-224ENST00000554040 EDEM2Q9BV94 578 aa7.59□□□□□ -1.19
ATXN3-224ENST00000554040 LRRC2Q9BYS8 371 aa7.59□□□□□ -1.19
ATXN3-224ENST00000554040 TRIM6Q9C030 488 aaPredicted RBP7.59□□□□□ -1.19
ATXN3-224ENST00000554040 ZMYND12Q9H0C1 365 aa7.59□□□□□ -1.19
ATXN3-224ENST00000554040 TRPV4Q9HBA0 871 aa7.59□□□□□ -1.19
ATXN3-224ENST00000554040 ANKFY1Q9P2R3 1169 aa7.59□□□□□ -1.19
ATXN3-224ENST00000554040 CACNG4Q9UBN1 327 aa7.59□□□□□ -1.19
ATXN3-224ENST00000554040 MSRB2Q9Y3D2 182 aa7.59□□□□□ -1.19
ATXN3-224ENST00000554040 NEUROG3Q9Y4Z2 214 aa7.59□□□□□ -1.19
ATXN3-224ENST00000554040 SPAG17Q6Q759 2223 aa7.59□□□□□ -1.19
ATXN3-224ENST00000554040 IGSF10Q6WRI0 2623 aa7.58□□□□□ -1.2
ATXN3-224ENST00000554040 GON4LQ3T8J9 2241 aa7.58□□□□□ -1.2
ATXN3-224ENST00000554040 FAM95CA0A1B0GW59 222 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms