RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 ASB3Q9Y575 518 aa24.31■■□□□ 1.48
TDP1-206ENST00000553569 CEBPBP17676 345 aa24.3■■□□□ 1.48
TDP1-206ENST00000553569 PTMSP20962 102 aa24.3■■□□□ 1.48
TDP1-206ENST00000553569 CCR2P41597 374 aa24.3■■□□□ 1.48
TDP1-206ENST00000553569 RPL10AP62906 217 aaKnown RBP24.3■■□□□ 1.48
TDP1-206ENST00000553569 TYRO3Q06418 890 aa24.3■■□□□ 1.48
TDP1-206ENST00000553569 INCA1Q0VD86 236 aa24.3■■□□□ 1.48
TDP1-206ENST00000553569 TAF12Q16514 161 aa24.3■■□□□ 1.48
TDP1-206ENST00000553569 DDR2Q16832 855 aa24.3■■□□□ 1.48
TDP1-206ENST00000553569 KLHL40Q2TBA0 621 aa24.3■■□□□ 1.48
TDP1-206ENST00000553569 PRSS36Q5K4E3 855 aa24.3■■□□□ 1.48
TDP1-206ENST00000553569 DNAJB7Q7Z6W7 309 aaPredicted RBP24.3■■□□□ 1.48
TDP1-206ENST00000553569 TMC8Q8IU68 726 aa24.3■■□□□ 1.48
TDP1-206ENST00000553569 FGF13Q92913 245 aa24.3■■□□□ 1.48
TDP1-206ENST00000553569 TWNKQ96RR1 684 aa24.3■■□□□ 1.48
TDP1-206ENST00000553569 ZNF334Q9HCZ1 680 aaPredicted RBP24.3■■□□□ 1.48
TDP1-206ENST00000553569 AVENQ9NQS1 362 aaPredicted RBP24.3■■□□□ 1.48
TDP1-206ENST00000553569 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP24.3■■□□□ 1.48
TDP1-206ENST00000553569 CDH7Q9ULB5 785 aa24.3■■□□□ 1.48
TDP1-206ENST00000553569 CLDN5O00501 218 aa24.29■■□□□ 1.48
TDP1-206ENST00000553569 PMM2O15305 246 aa24.29■■□□□ 1.48
TDP1-206ENST00000553569 P4HA2O15460 535 aa24.29■■□□□ 1.48
TDP1-206ENST00000553569 ASGR2P07307 311 aa24.29■■□□□ 1.48
TDP1-206ENST00000553569 GJA1P17302 382 aa24.29■■□□□ 1.48
TDP1-206ENST00000553569 UNC93AQ86WB7 457 aa24.29■■□□□ 1.48
TDP1-206ENST00000553569 NPAS3Q8IXF0 933 aa24.29■■□□□ 1.48
TDP1-206ENST00000553569 LEMD2Q8NC56 503 aa24.29■■□□□ 1.48
TDP1-206ENST00000553569 NT5C1BQ96P26 610 aa24.29■■□□□ 1.48
TDP1-206ENST00000553569 MED10Q9BTT4 135 aa24.29■■□□□ 1.48
TDP1-206ENST00000553569 B3GNT5Q9BYG0 378 aa24.29■■□□□ 1.48
TDP1-206ENST00000553569 ZNF518BQ9C0D4 1074 aa24.29■■□□□ 1.48
TDP1-206ENST00000553569 NFE2L3Q9Y4A8 694 aa24.29■■□□□ 1.48
TDP1-206ENST00000553569 NRG2O14511 850 aaPredicted RBP24.28■■□□□ 1.48
TDP1-206ENST00000553569 ZNF197O14709 1029 aa24.28■■□□□ 1.48
TDP1-206ENST00000553569 CILPO75339 1184 aa24.28■■□□□ 1.48
TDP1-206ENST00000553569 GRIK1P39086 918 aa24.28■■□□□ 1.48
TDP1-206ENST00000553569 MAGEA11P43364 429 aa24.28■■□□□ 1.48
TDP1-206ENST00000553569 EPHA5P54756 1037 aa24.28■■□□□ 1.48
TDP1-206ENST00000553569 CUL2Q13617 745 aa24.28■■□□□ 1.48
TDP1-206ENST00000553569 ST13P5Q8NFI4 369 aaPredicted RBP24.28■■□□□ 1.48
TDP1-206ENST00000553569 ENOX1Q8TC92 643 aaKnown RBP24.28■■□□□ 1.48
TDP1-206ENST00000553569 NT5C1AQ9BXI3 368 aa24.28■■□□□ 1.48
TDP1-206ENST00000553569 LRRC3Q9BY71 257 aa24.28■■□□□ 1.48
TDP1-206ENST00000553569 CISHQ9NSE2 258 aa24.28■■□□□ 1.48
TDP1-206ENST00000553569 SAMSN1Q9NSI8 373 aaKnown RBP24.28■■□□□ 1.48
TDP1-206ENST00000553569 FAM49BQ9NUQ9 324 aa24.28■■□□□ 1.48
TDP1-206ENST00000553569 EPS15L1Q9UBC2 864 aa24.28■■□□□ 1.48
TDP1-206ENST00000553569 MAGED2Q9UNF1 606 aaPredicted RBP24.28■■□□□ 1.48
TDP1-206ENST00000553569 LAMP2P13473 410 aa24.27■■□□□ 1.48
TDP1-206ENST00000553569 CCDC130P13994 396 aa24.27■■□□□ 1.48
TDP1-206ENST00000553569 TRIM21P19474 475 aaKnown RBP24.27■■□□□ 1.48
TDP1-206ENST00000553569 MTMR3Q13615 1198 aa24.27■■□□□ 1.48
TDP1-206ENST00000553569 ZNF394Q53GI3 561 aa24.27■■□□□ 1.48
TDP1-206ENST00000553569 VSTM1Q6UX27 236 aa24.27■■□□□ 1.48
TDP1-206ENST00000553569 FAM35AQ86V20 835 aa24.27■■□□□ 1.48
TDP1-206ENST00000553569 MCRS1Q96EZ8 462 aa24.27■■□□□ 1.48
TDP1-206ENST00000553569 FAXDC2Q96IV6 333 aa24.27■■□□□ 1.48
TDP1-206ENST00000553569 ELOVL4Q9GZR5 314 aa24.27■■□□□ 1.48
TDP1-206ENST00000553569 INTS2Q9H0H0 1204 aaKnown RBP24.27■■□□□ 1.48
TDP1-206ENST00000553569 GCNT4Q9P109 453 aa24.27■■□□□ 1.48
TDP1-206ENST00000553569 ATP8B3O60423 1300 aa24.27■■□□□ 1.48
TDP1-206ENST00000553569 A0A1W2PRU2 124 aa24.26■■□□□ 1.47
TDP1-206ENST00000553569 KCNJ18B7U540 433 aa24.26■■□□□ 1.47
TDP1-206ENST00000553569 PRKCSHP14314 528 aaPredicted RBP24.26■■□□□ 1.47
TDP1-206ENST00000553569 ANXA13P27216 316 aa24.26■■□□□ 1.47
TDP1-206ENST00000553569 GABRR2P28476 465 aa24.26■■□□□ 1.47
TDP1-206ENST00000553569 KCNJ12Q14500 433 aa24.26■■□□□ 1.47
TDP1-206ENST00000553569 TEAD2Q15562 447 aa24.26■■□□□ 1.47
TDP1-206ENST00000553569 MAN2A1Q16706 1144 aa24.26■■□□□ 1.47
TDP1-206ENST00000553569 PPM1KQ8N3J5 372 aa24.26■■□□□ 1.47
TDP1-206ENST00000553569 C12orf29Q8N999 325 aa24.26■■□□□ 1.47
TDP1-206ENST00000553569 LMO3Q8TAP4 145 aa24.26■■□□□ 1.47
TDP1-206ENST00000553569 SHKBP1Q8TBC3 707 aa24.26■■□□□ 1.47
TDP1-206ENST00000553569 WHAMMQ8TF30 809 aa24.26■■□□□ 1.47
TDP1-206ENST00000553569 MYO10Q9HD67 2058 aa24.26■■□□□ 1.47
TDP1-206ENST00000553569 MYH10P35580 1976 aa24.25■■□□□ 1.47
TDP1-206ENST00000553569 SLC38A8A6NNN8 435 aa24.25■■□□□ 1.47
TDP1-206ENST00000553569 F8VP50 259 aa24.25■■□□□ 1.47
TDP1-206ENST00000553569 TRIM66O15016 1216 aa24.25■■□□□ 1.47
TDP1-206ENST00000553569 MOSPD3O75425 235 aa24.25■■□□□ 1.47
TDP1-206ENST00000553569 CSH1P0DML2 217 aa24.25■■□□□ 1.47
TDP1-206ENST00000553569 CSH2P0DML3 217 aa24.25■■□□□ 1.47
TDP1-206ENST00000553569 TBXAS1P24557 533 aaPredicted RBP24.25■■□□□ 1.47
TDP1-206ENST00000553569 CACNA2D1P54289 1103 aa24.25■■□□□ 1.47
TDP1-206ENST00000553569 CRYBG2Q8N1P7 616 aa24.25■■□□□ 1.47
TDP1-206ENST00000553569 EHBP1Q8NDI1 1231 aa24.25■■□□□ 1.47
TDP1-206ENST00000553569 SLC2A14Q8TDB8 520 aa24.25■■□□□ 1.47
TDP1-206ENST00000553569 CRACR2AQ9BSW2 395 aa24.25■■□□□ 1.47
TDP1-206ENST00000553569 KRT82Q9NSB4 513 aa24.25■■□□□ 1.47
TDP1-206ENST00000553569 TMEM30AQ9NV96 361 aa24.25■■□□□ 1.47
TDP1-206ENST00000553569 ZFP37Q9Y6Q3 630 aaPredicted RBP24.25■■□□□ 1.47
TDP1-206ENST00000553569 DCXO43602 365 aa24.24■■□□□ 1.47
TDP1-206ENST00000553569 HMGA1P17096 107 aaKnown RBP24.24■■□□□ 1.47
TDP1-206ENST00000553569 ADORA2BP29275 332 aa24.24■■□□□ 1.47
TDP1-206ENST00000553569 YWHAEP62258 255 aaKnown RBP24.24■■□□□ 1.47
TDP1-206ENST00000553569 PTPN21Q16825 1174 aa24.24■■□□□ 1.47
TDP1-206ENST00000553569 ANO6Q4KMQ2 910 aa24.24■■□□□ 1.47
TDP1-206ENST00000553569 GAREM2Q75VX8 874 aa24.24■■□□□ 1.47
TDP1-206ENST00000553569 ARHGEF19Q8IW93 802 aa24.24■■□□□ 1.47
TDP1-206ENST00000553569 FUKQ8N0W3 1084 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms