RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 MYBPHLA2RUH7 354 aa14.55□□□□□ -0.08
APEX1-205ENST00000553555 MTA2O94776 668 aa14.55□□□□□ -0.08
APEX1-205ENST00000553555 OAZ2O95190 189 aa14.55□□□□□ -0.08
APEX1-205ENST00000553555 SETSIPP0DME0 302 aa14.55□□□□□ -0.08
APEX1-205ENST00000553555 RRM1P23921 792 aa14.55□□□□□ -0.08
APEX1-205ENST00000553555 ADORA2BP29275 332 aa14.55□□□□□ -0.08
APEX1-205ENST00000553555 TKTP29401 623 aaKnown RBP14.55□□□□□ -0.08
APEX1-205ENST00000553555 PBX3P40426 434 aa14.55□□□□□ -0.08
APEX1-205ENST00000553555 ALDH7A1P49419 539 aaKnown RBP14.55□□□□□ -0.08
APEX1-205ENST00000553555 YWHAHQ04917 246 aaPredicted RBP14.55□□□□□ -0.08
APEX1-205ENST00000553555 PTPN20Q4JDL3 420 aa14.55□□□□□ -0.08
APEX1-205ENST00000553555 MDH1BQ5I0G3 518 aa14.55□□□□□ -0.08
APEX1-205ENST00000553555 FUT10Q6P4F1 479 aa14.55□□□□□ -0.08
APEX1-205ENST00000553555 FAM171BQ6P995 826 aa14.55□□□□□ -0.08
APEX1-205ENST00000553555 PAQR9Q6ZVX9 377 aa14.55□□□□□ -0.08
APEX1-205ENST00000553555 FUKQ8N0W3 1084 aa14.55□□□□□ -0.08
APEX1-205ENST00000553555 CALR3Q96L12 384 aaKnown RBP14.55□□□□□ -0.08
APEX1-205ENST00000553555 ALS2CR12Q96Q35 445 aa14.55□□□□□ -0.08
APEX1-205ENST00000553555 CTTNBP2NLQ9P2B4 639 aa14.55□□□□□ -0.08
APEX1-205ENST00000553555 UVRAGQ9P2Y5 699 aa14.55□□□□□ -0.08
APEX1-205ENST00000553555 CHORDC1Q9UHD1 332 aaPredicted RBP14.55□□□□□ -0.08
APEX1-205ENST00000553555 ZMYND8Q9ULU4 1186 aaPredicted RBP14.55□□□□□ -0.08
APEX1-205ENST00000553555 PCDHGC5Q9Y5F6 944 aa14.55□□□□□ -0.08
APEX1-205ENST00000553555 GRID2IPA4D2P6 1211 aa14.54□□□□□ -0.08
APEX1-205ENST00000553555 PALMO75781 387 aa14.54□□□□□ -0.08
APEX1-205ENST00000553555 FGFR3P22607 806 aa14.54□□□□□ -0.08
APEX1-205ENST00000553555 GABRB2P47870 512 aa14.54□□□□□ -0.08
APEX1-205ENST00000553555 PDE4CQ08493 712 aa14.54□□□□□ -0.08
APEX1-205ENST00000553555 ELAVL2Q12926 359 aaKnown RBP14.54□□□□□ -0.08
APEX1-205ENST00000553555 MRPL58Q14197 206 aaKnown RBP14.54□□□□□ -0.08
APEX1-205ENST00000553555 BTG3Q14201 252 aaPredicted RBP14.54□□□□□ -0.08
APEX1-205ENST00000553555 CCDC142Q17RM4 750 aa14.54□□□□□ -0.08
APEX1-205ENST00000553555 INTS6LQ5JSJ4 861 aaKnown RBP14.54□□□□□ -0.08
APEX1-205ENST00000553555 COL13A1Q5TAT6 717 aaPredicted RBP14.54□□□□□ -0.08
APEX1-205ENST00000553555 FAM171A1Q5VUB5 890 aa14.54□□□□□ -0.08
APEX1-205ENST00000553555 PLEKHA7Q6IQ23 1121 aa14.54□□□□□ -0.08
APEX1-205ENST00000553555 PHLDB2Q86SQ0 1253 aa14.54□□□□□ -0.08
APEX1-205ENST00000553555 TMEM173Q86WV6 379 aaPredicted RBP14.54□□□□□ -0.08
APEX1-205ENST00000553555 OR10T2Q8NGX3 314 aa14.54□□□□□ -0.08
APEX1-205ENST00000553555 MYCBPAPQ8TBZ2 947 aa14.54□□□□□ -0.08
APEX1-205ENST00000553555 BCL7CQ8WUZ0 217 aaPredicted RBP14.54□□□□□ -0.08
APEX1-205ENST00000553555 SLC35F5Q8WV83 523 aa14.54□□□□□ -0.08
APEX1-205ENST00000553555 HERVK_113Q902F9 699 aa14.54□□□□□ -0.08
APEX1-205ENST00000553555 C18orf8Q96DM3 657 aa14.54□□□□□ -0.08
APEX1-205ENST00000553555 CPXM1Q96SM3 734 aa14.54□□□□□ -0.08
APEX1-205ENST00000553555 PKMYT1Q99640 499 aa14.54□□□□□ -0.08
APEX1-205ENST00000553555 NUP85Q9BW27 656 aa14.54□□□□□ -0.08
APEX1-205ENST00000553555 B3GNT5Q9BYG0 378 aa14.54□□□□□ -0.08
APEX1-205ENST00000553555 SF3B1O75533 1304 aaKnown RBP eCLIP14.53□□□□□ -0.08
APEX1-205ENST00000553555 CLDN5O00501 218 aa14.53□□□□□ -0.08
APEX1-205ENST00000553555 EFEMP2O95967 443 aa14.53□□□□□ -0.08
APEX1-205ENST00000553555 BCAT1P54687 386 aa14.53□□□□□ -0.08
APEX1-205ENST00000553555 PLCB3Q01970 1234 aa14.53□□□□□ -0.08
APEX1-205ENST00000553555 BST2Q10589 180 aaKnown RBP14.53□□□□□ -0.08
APEX1-205ENST00000553555 PDCLQ13371 301 aa14.53□□□□□ -0.08
APEX1-205ENST00000553555 SPOUT1Q5T280 376 aaKnown RBP14.53□□□□□ -0.08
APEX1-205ENST00000553555 LLGL2Q6P1M3 1020 aa14.53□□□□□ -0.08
APEX1-205ENST00000553555 KCNT2Q6UVM3 1135 aa14.53□□□□□ -0.08
APEX1-205ENST00000553555 LRRC57Q8N9N7 239 aa14.53□□□□□ -0.08
APEX1-205ENST00000553555 MSANTD4Q8NCY6 345 aa14.53□□□□□ -0.08
APEX1-205ENST00000553555 ZNF564Q8TBZ8 553 aaPredicted RBP14.53□□□□□ -0.08
APEX1-205ENST00000553555 STK32AQ8WU08 396 aa14.53□□□□□ -0.08
APEX1-205ENST00000553555 DPF3Q92784 378 aa14.53□□□□□ -0.08
APEX1-205ENST00000553555 NAPGQ99747 312 aaPredicted RBP14.53□□□□□ -0.08
APEX1-205ENST00000553555 SLC4A5Q9BY07 1137 aa14.53□□□□□ -0.08
APEX1-205ENST00000553555 DUSP16Q9BY84 665 aa14.53□□□□□ -0.08
APEX1-205ENST00000553555 CXXC1Q9P0U4 656 aaPredicted RBP14.53□□□□□ -0.08
APEX1-205ENST00000553555 TJP2Q9UDY2 1190 aa14.53□□□□□ -0.08
APEX1-205ENST00000553555 TCRBV5S1A1TA0A578 114 aa14.52□□□□□ -0.08
APEX1-205ENST00000553555 CTAGE9A4FU28 777 aa14.52□□□□□ -0.08
APEX1-205ENST00000553555 TULP2O00295 520 aa14.52□□□□□ -0.08
APEX1-205ENST00000553555 GJB5O95377 273 aa14.52□□□□□ -0.08
APEX1-205ENST00000553555 RPL34P49207 117 aaKnown RBP14.52□□□□□ -0.08
APEX1-205ENST00000553555 HTRA4P83105 476 aaPredicted RBP14.52□□□□□ -0.08
APEX1-205ENST00000553555 TSPY1Q01534 308 aa14.52□□□□□ -0.08
APEX1-205ENST00000553555 MAMLD1Q13495 774 aa14.52□□□□□ -0.08
APEX1-205ENST00000553555 ZNF268Q14587 947 aaPredicted RBP14.52□□□□□ -0.08
APEX1-205ENST00000553555 VARS2Q5ST30 1063 aaKnown RBP14.52□□□□□ -0.08
APEX1-205ENST00000553555 PMF1Q6P1K2 205 aa14.52□□□□□ -0.08
APEX1-205ENST00000553555 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.52□□□□□ -0.08
APEX1-205ENST00000553555 SLFN11Q7Z7L1 901 aa14.52□□□□□ -0.08
APEX1-205ENST00000553555 LRRTM3Q86VH5 581 aa14.52□□□□□ -0.08
APEX1-205ENST00000553555 CEP57Q86XR8 500 aa14.52□□□□□ -0.08
APEX1-205ENST00000553555 PCED1BQ96HM7 432 aa14.52□□□□□ -0.08
APEX1-205ENST00000553555 IGSF21Q96ID5 467 aa14.52□□□□□ -0.08
APEX1-205ENST00000553555 ZNF558Q96NG5 402 aa14.52□□□□□ -0.08
APEX1-205ENST00000553555 TMEM209Q96SK2 561 aa14.52□□□□□ -0.08
APEX1-205ENST00000553555 YME1L1Q96TA2 773 aa14.52□□□□□ -0.08
APEX1-205ENST00000553555 MED10Q9BTT4 135 aa14.52□□□□□ -0.08
APEX1-205ENST00000553555 MRPL47Q9HD33 250 aaKnown RBP14.52□□□□□ -0.08
APEX1-205ENST00000553555 PARVAQ9NVD7 372 aa14.52□□□□□ -0.08
APEX1-205ENST00000553555 WDR35Q9P2L0 1181 aa14.52□□□□□ -0.08
APEX1-205ENST00000553555 STRIP2Q9ULQ0 834 aa14.52□□□□□ -0.08
APEX1-205ENST00000553555 JRKLQ9Y4A0 524 aa14.52□□□□□ -0.08
APEX1-205ENST00000553555 MRPL42Q9Y6G3 142 aaKnown RBP14.52□□□□□ -0.08
APEX1-205ENST00000553555 SCINQ9Y6U3 715 aa14.52□□□□□ -0.08
APEX1-205ENST00000553555 CARNS1A5YM72 827 aa14.52□□□□□ -0.09
APEX1-205ENST00000553555 BUB1BO60566 1050 aaPredicted RBP14.52□□□□□ -0.09
APEX1-205ENST00000553555 CAPN15O75808 1086 aa14.52□□□□□ -0.09
APEX1-205ENST00000553555 ERBB2P04626 1255 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms