RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 A8MXQ7 604 aa25.2■■□□□ 1.62
TDP1-205ENST00000553527 ECI2O75521 394 aa25.2■■□□□ 1.62
TDP1-205ENST00000553527 STAU1O95793 577 aaKnown RBP25.2■■□□□ 1.62
TDP1-205ENST00000553527 BMP6P22004 513 aa25.2■■□□□ 1.62
TDP1-205ENST00000553527 PPP1R2P41236 205 aa25.2■■□□□ 1.62
TDP1-205ENST00000553527 VIPR2P41587 438 aa25.2■■□□□ 1.62
TDP1-205ENST00000553527 PIK3CAP42336 1068 aa25.2■■□□□ 1.62
TDP1-205ENST00000553527 PMS1P54277 932 aaKnown RBP25.2■■□□□ 1.62
TDP1-205ENST00000553527 RPL10AP62906 217 aaKnown RBP25.2■■□□□ 1.62
TDP1-205ENST00000553527 CYP4F8P98187 520 aa25.2■■□□□ 1.62
TDP1-205ENST00000553527 GRM2Q14416 872 aa25.2■■□□□ 1.62
TDP1-205ENST00000553527 SGSM1Q2NKQ1 1148 aa25.2■■□□□ 1.62
TDP1-205ENST00000553527 MDH1BQ5I0G3 518 aa25.2■■□□□ 1.62
TDP1-205ENST00000553527 GPR158Q5T848 1215 aa25.2■■□□□ 1.62
TDP1-205ENST00000553527 C4orf50Q6ZRC1 276 aa25.2■■□□□ 1.62
TDP1-205ENST00000553527 SMARCD2Q92925 531 aa25.2■■□□□ 1.62
TDP1-205ENST00000553527 MYLPFQ96A32 169 aa25.2■■□□□ 1.62
TDP1-205ENST00000553527 ELSPBP1Q96BH3 223 aa25.2■■□□□ 1.62
TDP1-205ENST00000553527 DPEP3Q9H4B8 488 aa25.2■■□□□ 1.62
TDP1-205ENST00000553527 MYH10P35580 1976 aa25.19■■□□□ 1.62
TDP1-205ENST00000553527 TRIM49BA6NDI0 452 aa25.19■■□□□ 1.62
TDP1-205ENST00000553527 FGF19O95750 216 aa25.19■■□□□ 1.62
TDP1-205ENST00000553527 HLA-DRAP01903 254 aa25.19■■□□□ 1.62
TDP1-205ENST00000553527 EPB41P11171 864 aaKnown RBP25.19■■□□□ 1.62
TDP1-205ENST00000553527 BDNFP23560 247 aa25.19■■□□□ 1.62
TDP1-205ENST00000553527 PPP3CAQ08209 521 aa25.19■■□□□ 1.62
TDP1-205ENST00000553527 SPOPLQ6IQ16 392 aa25.19■■□□□ 1.62
TDP1-205ENST00000553527 ADSSL1Q8N142 457 aa25.19■■□□□ 1.62
TDP1-205ENST00000553527 GCNAQ96QF7 691 aa25.19■■□□□ 1.62
TDP1-205ENST00000553527 GPR88Q9GZN0 384 aa25.19■■□□□ 1.62
TDP1-205ENST00000553527 ABCB6Q9NP58 842 aa25.19■■□□□ 1.62
TDP1-205ENST00000553527 SLC2A4RGQ9NR83 387 aa25.19■■□□□ 1.62
TDP1-205ENST00000553527 PTPRDP23468 1912 aa25.18■■□□□ 1.62
TDP1-205ENST00000553527 PSMA7O14818 248 aa25.18■■□□□ 1.62
TDP1-205ENST00000553527 NPR3P17342 541 aa25.18■■□□□ 1.62
TDP1-205ENST00000553527 PTPN1P18031 435 aaKnown RBP25.18■■□□□ 1.62
TDP1-205ENST00000553527 FCARP24071 287 aa25.18■■□□□ 1.62
TDP1-205ENST00000553527 GRIK1P39086 918 aa25.18■■□□□ 1.62
TDP1-205ENST00000553527 MAPRE1Q15691 268 aaKnown RBP25.18■■□□□ 1.62
TDP1-205ENST00000553527 ARHGAP15Q53QZ3 475 aa25.18■■□□□ 1.62
TDP1-205ENST00000553527 KLHL10Q6JEL2 608 aa25.18■■□□□ 1.62
TDP1-205ENST00000553527 MYCBPAPQ8TBZ2 947 aa25.18■■□□□ 1.62
TDP1-205ENST00000553527 PCED1BQ96HM7 432 aa25.18■■□□□ 1.62
TDP1-205ENST00000553527 VRTNQ9H8Y1 702 aa25.18■■□□□ 1.62
TDP1-205ENST00000553527 FAM163BP0C2L3 166 aa25.17■■□□□ 1.62
TDP1-205ENST00000553527 CSH1P0DML2 217 aa25.17■■□□□ 1.62
TDP1-205ENST00000553527 CSH2P0DML3 217 aa25.17■■□□□ 1.62
TDP1-205ENST00000553527 CD44P16070 742 aaKnown RBP25.17■■□□□ 1.62
TDP1-205ENST00000553527 CFAP221Q4G0U5 840 aa25.17■■□□□ 1.62
TDP1-205ENST00000553527 ASTLQ6HA08 431 aaPredicted RBP25.17■■□□□ 1.62
TDP1-205ENST00000553527 FUBP3Q96I24 572 aaKnown RBP eCLIP25.17■■□□□ 1.62
TDP1-205ENST00000553527 SDCBP2Q9H190 292 aa25.17■■□□□ 1.62
TDP1-205ENST00000553527 IL21Q9HBE4 155 aa25.17■■□□□ 1.62
TDP1-205ENST00000553527 ARHGEF3Q9NR81 526 aa25.17■■□□□ 1.62
TDP1-205ENST00000553527 GREB1Q4ZG55 1949 aa25.16■■□□□ 1.62
TDP1-205ENST00000553527 SLC38A8A6NNN8 435 aa25.16■■□□□ 1.62
TDP1-205ENST00000553527 PI15O43692 258 aa25.16■■□□□ 1.62
TDP1-205ENST00000553527 OBSL1O75147 1896 aa25.16■■□□□ 1.62
TDP1-205ENST00000553527 P4HA1P13674 534 aa25.16■■□□□ 1.62
TDP1-205ENST00000553527 HMGA1P17096 107 aaKnown RBP25.16■■□□□ 1.62
TDP1-205ENST00000553527 CDC25CP30307 473 aa25.16■■□□□ 1.62
TDP1-205ENST00000553527 TCERG1LQ5VWI1 586 aa25.16■■□□□ 1.62
TDP1-205ENST00000553527 SASS6Q6UVJ0 657 aa25.16■■□□□ 1.62
TDP1-205ENST00000553527 VITQ6UXI7 678 aa25.16■■□□□ 1.62
TDP1-205ENST00000553527 ARID3BQ8IVW6 561 aaPredicted RBP25.16■■□□□ 1.62
TDP1-205ENST00000553527 TMEM105Q8N8V8 129 aa25.16■■□□□ 1.62
TDP1-205ENST00000553527 TAS1R2Q8TE23 839 aa25.16■■□□□ 1.62
TDP1-205ENST00000553527 TRMT61BQ9BVS5 477 aaKnown RBP25.16■■□□□ 1.62
TDP1-205ENST00000553527 HEPACAM2A8MVW5 462 aa25.15■■□□□ 1.62
TDP1-205ENST00000553527 NLRP12P59046 1061 aa25.15■■□□□ 1.62
TDP1-205ENST00000553527 FKBP3Q00688 224 aaKnown RBP25.15■■□□□ 1.62
TDP1-205ENST00000553527 SLC44A4Q53GD3 710 aa25.15■■□□□ 1.62
TDP1-205ENST00000553527 DCAF17Q5H9S7 520 aaPredicted RBP25.15■■□□□ 1.62
TDP1-205ENST00000553527 CWF19L1Q69YN2 538 aaKnown RBP25.15■■□□□ 1.62
TDP1-205ENST00000553527 B3GALNT2Q8NCR0 500 aa25.15■■□□□ 1.62
TDP1-205ENST00000553527 TAF4BQ92750 862 aa25.15■■□□□ 1.62
TDP1-205ENST00000553527 DHTKD1Q96HY7 919 aaPredicted RBP25.15■■□□□ 1.62
TDP1-205ENST00000553527 MKNK1Q9BUB5 465 aa25.15■■□□□ 1.62
TDP1-205ENST00000553527 IMPG2Q9BZV3 1241 aa25.15■■□□□ 1.62
TDP1-205ENST00000553527 BRD9Q9H8M2 597 aa25.15■■□□□ 1.62
TDP1-205ENST00000553527 TBC1D17Q9HA65 648 aa25.15■■□□□ 1.62
TDP1-205ENST00000553527 CTNND2Q9UQB3 1225 aa25.15■■□□□ 1.62
TDP1-205ENST00000553527 PPP1R3GB7ZBB8 358 aa25.14■■□□□ 1.62
TDP1-205ENST00000553527 CLDN5O00501 218 aa25.14■■□□□ 1.62
TDP1-205ENST00000553527 LRRN2O75325 713 aa25.14■■□□□ 1.62
TDP1-205ENST00000553527 ASS1P00966 412 aaKnown RBP25.14■■□□□ 1.62
TDP1-205ENST00000553527 PSMC3P17980 439 aa25.14■■□□□ 1.62
TDP1-205ENST00000553527 CCNE1P24864 410 aa25.14■■□□□ 1.62
TDP1-205ENST00000553527 GDI1P31150 447 aa25.14■■□□□ 1.62
TDP1-205ENST00000553527 CLCN5P51795 746 aa25.14■■□□□ 1.62
TDP1-205ENST00000553527 ORC1Q13415 861 aa25.14■■□□□ 1.62
TDP1-205ENST00000553527 MAB21L3Q8N8X9 362 aa25.14■■□□□ 1.62
TDP1-205ENST00000553527 MLKLQ8NB16 471 aa25.14■■□□□ 1.62
TDP1-205ENST00000553527 SLC46A2Q9BY10 475 aa25.14■■□□□ 1.62
TDP1-205ENST00000553527 TASP1Q9H6P5 420 aa25.14■■□□□ 1.62
TDP1-205ENST00000553527 TMEM8AQ9HCN3 771 aa25.14■■□□□ 1.62
TDP1-205ENST00000553527 DACH1Q9UI36 760 aa25.14■■□□□ 1.62
TDP1-205ENST00000553527 NUP210Q8TEM1 1887 aaPredicted RBP25.14■■□□□ 1.61
TDP1-205ENST00000553527 COL4A3Q01955 1670 aa25.13■■□□□ 1.61
TDP1-205ENST00000553527 DPYSL4O14531 572 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms