RNA–Protein interactions for RNA: ENST00000553283.1

CHD8-203, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 4

Gene CHD8, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-203ENST00000553283 FRMD3A2A2Y4 597 aa10.07□□□□□ -0.8
CHD8-203ENST00000553283 VPS37CA5D8V6 355 aaPredicted RBP10.07□□□□□ -0.8
CHD8-203ENST00000553283 GOLGA8IPA6NC78 632 aa10.07□□□□□ -0.8
CHD8-203ENST00000553283 GOLGA8JA6NMD2 632 aa10.07□□□□□ -0.8
CHD8-203ENST00000553283 GABRDO14764 452 aa10.07□□□□□ -0.8
CHD8-203ENST00000553283 AXIN1O15169 862 aa10.07□□□□□ -0.8
CHD8-203ENST00000553283 EGFP01133 1207 aa10.07□□□□□ -0.8
CHD8-203ENST00000553283 IDEP14735 1019 aa10.07□□□□□ -0.8
CHD8-203ENST00000553283 ARSAP15289 507 aa10.07□□□□□ -0.8
CHD8-203ENST00000553283 PDCP20941 246 aa10.07□□□□□ -0.8
CHD8-203ENST00000553283 DRD1P21728 446 aa10.07□□□□□ -0.8
CHD8-203ENST00000553283 ACAT1P24752 427 aaKnown RBP10.07□□□□□ -0.8
CHD8-203ENST00000553283 GJA4P35212 333 aa10.07□□□□□ -0.8
CHD8-203ENST00000553283 TXLNAP40222 546 aa10.07□□□□□ -0.8
CHD8-203ENST00000553283 RAP1GAPP47736 663 aa10.07□□□□□ -0.8
CHD8-203ENST00000553283 LHX1P48742 406 aa10.07□□□□□ -0.8
CHD8-203ENST00000553283 CASP5P51878 434 aa10.07□□□□□ -0.8
CHD8-203ENST00000553283 FAM160A1Q05DH4 1040 aa10.07□□□□□ -0.8
CHD8-203ENST00000553283 CUL4AQ13619 759 aa10.07□□□□□ -0.8
CHD8-203ENST00000553283 ALCAMQ13740 583 aa10.07□□□□□ -0.8
CHD8-203ENST00000553283 CFAP221Q4G0U5 840 aa10.07□□□□□ -0.8
CHD8-203ENST00000553283 FBXO43Q4G163 708 aa10.07□□□□□ -0.8
CHD8-203ENST00000553283 CCDC73Q6ZRK6 1079 aa10.07□□□□□ -0.8
CHD8-203ENST00000553283 OSTM1Q86WC4 334 aa10.07□□□□□ -0.8
CHD8-203ENST00000553283 STKLD1Q8NE28 680 aa10.07□□□□□ -0.8
CHD8-203ENST00000553283 DDX1Q92499 740 aaKnown RBP10.07□□□□□ -0.8
CHD8-203ENST00000553283 EXOC4Q96A65 974 aa10.07□□□□□ -0.8
CHD8-203ENST00000553283 CYP2S1Q96SQ9 504 aa10.07□□□□□ -0.8
CHD8-203ENST00000553283 P2RY13Q9BPV8 354 aa10.07□□□□□ -0.8
CHD8-203ENST00000553283 CBWD1Q9BRT8 395 aa10.07□□□□□ -0.8
CHD8-203ENST00000553283 PANK2Q9BZ23 570 aa10.07□□□□□ -0.8
CHD8-203ENST00000553283 ARRDC1-AS1Q9H2J1 176 aa10.07□□□□□ -0.8
CHD8-203ENST00000553283 TMEM206Q9H813 350 aa10.07□□□□□ -0.8
CHD8-203ENST00000553283 PDE11AQ9HCR9 933 aa10.07□□□□□ -0.8
CHD8-203ENST00000553283 SIX4Q9UIU6 781 aa10.07□□□□□ -0.8
CHD8-203ENST00000553283 SNX9Q9Y5X1 595 aa10.07□□□□□ -0.8
CHD8-203ENST00000553283 TRAV19A0A0A6YYK7 116 aa10.06□□□□□ -0.8
CHD8-203ENST00000553283 RNF40O75150 1001 aa10.06□□□□□ -0.8
CHD8-203ENST00000553283 TADA3O75528 432 aa10.06□□□□□ -0.8
CHD8-203ENST00000553283 AKAP3O75969 853 aa10.06□□□□□ -0.8
CHD8-203ENST00000553283 EPN2O95208 641 aa10.06□□□□□ -0.8
CHD8-203ENST00000553283 KRT19P08727 400 aa10.06□□□□□ -0.8
CHD8-203ENST00000553283 USP17L7P0C7H9 530 aa10.06□□□□□ -0.8
CHD8-203ENST00000553283 ZNF806P0C7X5 589 aa10.06□□□□□ -0.8
CHD8-203ENST00000553283 CCDC192P0DO97 292 aa10.06□□□□□ -0.8
CHD8-203ENST00000553283 PCSK1P29120 753 aa10.06□□□□□ -0.8
CHD8-203ENST00000553283 MAGEA11P43364 429 aa10.06□□□□□ -0.8
CHD8-203ENST00000553283 LIMK1P53667 647 aa10.06□□□□□ -0.8
CHD8-203ENST00000553283 CEBPZQ03701 1054 aaKnown RBP10.06□□□□□ -0.8
CHD8-203ENST00000553283 MTF1Q14872 753 aa10.06□□□□□ -0.8
CHD8-203ENST00000553283 SOWAHAQ2M3V2 549 aa10.06□□□□□ -0.8
CHD8-203ENST00000553283 FAM171BQ6P995 826 aa10.06□□□□□ -0.8
CHD8-203ENST00000553283 DPH6Q7L8W6 267 aa10.06□□□□□ -0.8
CHD8-203ENST00000553283 LIMS2Q7Z4I7 341 aa10.06□□□□□ -0.8
CHD8-203ENST00000553283 KBTBD6Q86V97 674 aa10.06□□□□□ -0.8
CHD8-203ENST00000553283 SPATA2LQ8IUW3 424 aaPredicted RBP10.06□□□□□ -0.8
CHD8-203ENST00000553283 SCN4BQ8IWT1 228 aa10.06□□□□□ -0.8
CHD8-203ENST00000553283 ADGRF2Q8IZF7 708 aa10.06□□□□□ -0.8
CHD8-203ENST00000553283 CPA6Q8N4T0 437 aa10.06□□□□□ -0.8
CHD8-203ENST00000553283 OSCP1Q8WVF1 389 aa10.06□□□□□ -0.8
CHD8-203ENST00000553283 FUBP3Q96I24 572 aaKnown RBP eCLIP10.06□□□□□ -0.8
CHD8-203ENST00000553283 ZC3H10Q96K80 434 aaKnown RBP10.06□□□□□ -0.8
CHD8-203ENST00000553283 FAM84AQ96KN4 292 aa10.06□□□□□ -0.8
CHD8-203ENST00000553283 SLC22A12Q96S37 553 aa10.06□□□□□ -0.8
CHD8-203ENST00000553283 FGFBP2Q9BYJ0 223 aa10.06□□□□□ -0.8
CHD8-203ENST00000553283 PCIF1Q9H4Z3 704 aa10.06□□□□□ -0.8
CHD8-203ENST00000553283 ECT2Q9H8V3 914 aa10.06□□□□□ -0.8
CHD8-203ENST00000553283 TRPC7Q9HCX4 862 aa10.06□□□□□ -0.8
CHD8-203ENST00000553283 PANK4Q9NVE7 773 aa10.06□□□□□ -0.8
CHD8-203ENST00000553283 DUS2Q9NX74 493 aaKnown RBP10.06□□□□□ -0.8
CHD8-203ENST00000553283 R3HCC1Q9Y3T6 440 aaKnown RBP10.06□□□□□ -0.8
CHD8-203ENST00000553283 NUP210Q8TEM1 1887 aaPredicted RBP10.06□□□□□ -0.8
CHD8-203ENST00000553283 TSC2P49815 1807 aa10.05□□□□□ -0.8
CHD8-203ENST00000553283 ANK1P16157 1881 aa10.05□□□□□ -0.8
CHD8-203ENST00000553283 KMT2BQ9UMN6 2715 aaPredicted RBP10.05□□□□□ -0.8
CHD8-203ENST00000553283 TM4SF5O14894 197 aa10.05□□□□□ -0.8
CHD8-203ENST00000553283 KIAA0391O15091 583 aaKnown RBP10.05□□□□□ -0.8
CHD8-203ENST00000553283 HCRTO43612 131 aa10.05□□□□□ -0.8
CHD8-203ENST00000553283 PRPF6O94906 941 aaKnown RBP10.05□□□□□ -0.8
CHD8-203ENST00000553283 CKMP06732 381 aa10.05□□□□□ -0.8
CHD8-203ENST00000553283 TMEM191BP0C7N4 346 aa10.05□□□□□ -0.8
CHD8-203ENST00000553283 HDCP19113 662 aa10.05□□□□□ -0.8
CHD8-203ENST00000553283 STAT6P42226 847 aa10.05□□□□□ -0.8
CHD8-203ENST00000553283 MYO1EQ12965 1108 aa10.05□□□□□ -0.8
CHD8-203ENST00000553283 RESTQ13127 1097 aa10.05□□□□□ -0.8
CHD8-203ENST00000553283 SLC39A14Q15043 492 aa10.05□□□□□ -0.8
CHD8-203ENST00000553283 SF3A2Q15428 464 aaKnown RBP10.05□□□□□ -0.8
CHD8-203ENST00000553283 ZNF77Q15935 545 aa10.05□□□□□ -0.8
CHD8-203ENST00000553283 CCDC142Q17RM4 750 aa10.05□□□□□ -0.8
CHD8-203ENST00000553283 AASDHQ4L235 1098 aaPredicted RBP10.05□□□□□ -0.8
CHD8-203ENST00000553283 PLA2G2CQ5R387 149 aa10.05□□□□□ -0.8
CHD8-203ENST00000553283 NAIF1Q69YI7 327 aaPredicted RBP10.05□□□□□ -0.8
CHD8-203ENST00000553283 IL31Q6EBC2 164 aa10.05□□□□□ -0.8
CHD8-203ENST00000553283 FAM173BQ6P4H8 233 aa10.05□□□□□ -0.8
CHD8-203ENST00000553283 C4orf50Q6ZRC1 276 aa10.05□□□□□ -0.8
CHD8-203ENST00000553283 SYT13Q7L8C5 426 aa10.05□□□□□ -0.8
CHD8-203ENST00000553283 GPD1LQ8N335 351 aa10.05□□□□□ -0.8
CHD8-203ENST00000553283 ARL14EPQ8N8R7 260 aaPredicted RBP10.05□□□□□ -0.8
CHD8-203ENST00000553283 FSIP1Q8NA03 581 aa10.05□□□□□ -0.8
CHD8-203ENST00000553283 C12orf50Q8NA57 414 aaPredicted RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms