RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 CCNG2Q16589 344 aa6.56□□□□□ -1.36
SCFD1-208ENST00000553278 PLA1AQ53H76 456 aa6.56□□□□□ -1.36
SCFD1-208ENST00000553278 WDR45BQ5MNZ6 344 aa6.56□□□□□ -1.36
SCFD1-208ENST00000553278 AGBL4Q5VU57 503 aa6.56□□□□□ -1.36
SCFD1-208ENST00000553278 TSHZ3Q63HK5 1081 aa6.56□□□□□ -1.36
SCFD1-208ENST00000553278 FCRL6Q6DN72 434 aa6.56□□□□□ -1.36
SCFD1-208ENST00000553278 Q6ZUG5 572 aa6.56□□□□□ -1.36
SCFD1-208ENST00000553278 GAS2L3Q86XJ1 694 aa6.56□□□□□ -1.36
SCFD1-208ENST00000553278 SLC17A8Q8NDX2 589 aa6.56□□□□□ -1.36
SCFD1-208ENST00000553278 NUDT10Q8NFP7 164 aa6.56□□□□□ -1.36
SCFD1-208ENST00000553278 CEP70Q8NHQ1 597 aa6.56□□□□□ -1.36
SCFD1-208ENST00000553278 ST8SIA4Q92187 359 aa6.56□□□□□ -1.36
SCFD1-208ENST00000553278 GOLGA1Q92805 767 aa6.56□□□□□ -1.36
SCFD1-208ENST00000553278 NUDT11Q96G61 164 aa6.56□□□□□ -1.36
SCFD1-208ENST00000553278 TWNKQ96RR1 684 aa6.56□□□□□ -1.36
SCFD1-208ENST00000553278 KRTAP4-12Q9BQ66 201 aa6.56□□□□□ -1.36
SCFD1-208ENST00000553278 GPR63Q9BZJ6 419 aa6.56□□□□□ -1.36
SCFD1-208ENST00000553278 GSTO2Q9H4Y5 243 aa6.56□□□□□ -1.36
SCFD1-208ENST00000553278 NSMCE4AQ9NXX6 385 aa6.56□□□□□ -1.36
SCFD1-208ENST00000553278 PI4KBQ9UBF8 816 aa6.56□□□□□ -1.36
SCFD1-208ENST00000553278 DKK4Q9UBT3 224 aa6.56□□□□□ -1.36
SCFD1-208ENST00000553278 AGAP1Q9UPQ3 857 aa6.56□□□□□ -1.36
SCFD1-208ENST00000553278 TBC1D30Q9Y2I9 924 aa6.56□□□□□ -1.36
SCFD1-208ENST00000553278 A0A1W2PPH5 198 aa6.55□□□□□ -1.36
SCFD1-208ENST00000553278 PCDH17O14917 1159 aa6.55□□□□□ -1.36
SCFD1-208ENST00000553278 CCNT2O60583 730 aaKnown RBP6.55□□□□□ -1.36
SCFD1-208ENST00000553278 AGFG2O95081 481 aa6.55□□□□□ -1.36
SCFD1-208ENST00000553278 RTN3O95197 1032 aaPredicted RBP6.55□□□□□ -1.36
SCFD1-208ENST00000553278 WNT11O96014 354 aa6.55□□□□□ -1.36
SCFD1-208ENST00000553278 MST1P26927 711 aa6.55□□□□□ -1.36
SCFD1-208ENST00000553278 SLC5A2P31639 672 aa6.55□□□□□ -1.36
SCFD1-208ENST00000553278 RAD52P43351 418 aa6.55□□□□□ -1.36
SCFD1-208ENST00000553278 CD97P48960 835 aa6.55□□□□□ -1.36
SCFD1-208ENST00000553278 CASP6P55212 293 aa6.55□□□□□ -1.36
SCFD1-208ENST00000553278 CLRN1P58418 232 aa6.55□□□□□ -1.36
SCFD1-208ENST00000553278 MRPL49Q13405 166 aaKnown RBP6.55□□□□□ -1.36
SCFD1-208ENST00000553278 LRP8Q14114 963 aa6.55□□□□□ -1.36
SCFD1-208ENST00000553278 KRT32Q14532 448 aa6.55□□□□□ -1.36
SCFD1-208ENST00000553278 USP10Q14694 798 aaKnown RBP6.55□□□□□ -1.36
SCFD1-208ENST00000553278 NFRKBQ6P4R8 1299 aa6.55□□□□□ -1.36
SCFD1-208ENST00000553278 PDXDC1Q6P996 788 aa6.55□□□□□ -1.36
SCFD1-208ENST00000553278 RINLQ6ZS11 566 aa6.55□□□□□ -1.36
SCFD1-208ENST00000553278 BBS12Q6ZW61 710 aa6.55□□□□□ -1.36
SCFD1-208ENST00000553278 KRT77Q7Z794 578 aa6.55□□□□□ -1.36
SCFD1-208ENST00000553278 SLC35B2Q8TB61 432 aa6.55□□□□□ -1.36
SCFD1-208ENST00000553278 CPT1CQ8TCG5 803 aa6.55□□□□□ -1.36
SCFD1-208ENST00000553278 CSGALNACT1Q8TDX6 532 aa6.55□□□□□ -1.36
SCFD1-208ENST00000553278 FNIP1Q8TF40 1166 aa6.55□□□□□ -1.36
SCFD1-208ENST00000553278 ZUFSPQ96AP4 578 aa6.55□□□□□ -1.36
SCFD1-208ENST00000553278 C3orf49Q96BT1 292 aa6.55□□□□□ -1.36
SCFD1-208ENST00000553278 GRAMD1AQ96CP6 724 aa6.55□□□□□ -1.36
SCFD1-208ENST00000553278 RSRC1Q96IZ7 334 aaKnown RBP6.55□□□□□ -1.36
SCFD1-208ENST00000553278 RPL10LQ96L21 214 aaKnown RBP6.55□□□□□ -1.36
SCFD1-208ENST00000553278 SDF4Q9BRK5 362 aa6.55□□□□□ -1.36
SCFD1-208ENST00000553278 IMPG2Q9BZV3 1241 aa6.55□□□□□ -1.36
SCFD1-208ENST00000553278 PAIP1Q9H074 479 aaKnown RBP6.55□□□□□ -1.36
SCFD1-208ENST00000553278 ENKD1Q9H0I2 346 aa6.55□□□□□ -1.36
SCFD1-208ENST00000553278 EPS8L2Q9H6S3 715 aa6.55□□□□□ -1.36
SCFD1-208ENST00000553278 ELAC1Q9H777 363 aaKnown RBP6.55□□□□□ -1.36
SCFD1-208ENST00000553278 FAM30AQ9NZY2 134 aa6.55□□□□□ -1.36
SCFD1-208ENST00000553278 C19orf53Q9UNZ5 99 aaPredicted RBP6.55□□□□□ -1.36
SCFD1-208ENST00000553278 ATP11BQ9Y2G3 1177 aa6.55□□□□□ -1.36
SCFD1-208ENST00000553278 RRP7AQ9Y3A4 280 aaKnown RBP6.55□□□□□ -1.36
SCFD1-208ENST00000553278 PGPEP1LA6NFU8 196 aa6.54□□□□□ -1.36
SCFD1-208ENST00000553278 B5MCH6 92 aa6.54□□□□□ -1.36
SCFD1-208ENST00000553278 PIAS2O75928 621 aa6.54□□□□□ -1.36
SCFD1-208ENST00000553278 KIF20AO95235 890 aa6.54□□□□□ -1.36
SCFD1-208ENST00000553278 VIPP01282 170 aa6.54□□□□□ -1.36
SCFD1-208ENST00000553278 ANXA6P08133 673 aa6.54□□□□□ -1.36
SCFD1-208ENST00000553278 GLI1P08151 1106 aa6.54□□□□□ -1.36
SCFD1-208ENST00000553278 ZNF28P17035 718 aa6.54□□□□□ -1.36
SCFD1-208ENST00000553278 IGFBP6P24592 240 aaPredicted RBP6.54□□□□□ -1.36
SCFD1-208ENST00000553278 CDR1P51861 262 aa6.54□□□□□ -1.36
SCFD1-208ENST00000553278 IQCB1Q15051 598 aa6.54□□□□□ -1.36
SCFD1-208ENST00000553278 ANKRD1Q15327 319 aa6.54□□□□□ -1.36
SCFD1-208ENST00000553278 MGAT5BQ3V5L5 792 aa6.54□□□□□ -1.36
SCFD1-208ENST00000553278 ZMAT1Q5H9K5 638 aa6.54□□□□□ -1.36
SCFD1-208ENST00000553278 CACHD1Q5VU97 1274 aa6.54□□□□□ -1.36
SCFD1-208ENST00000553278 ACAD10Q6JQN1 1059 aa6.54□□□□□ -1.36
SCFD1-208ENST00000553278 USP30Q70CQ3 517 aa6.54□□□□□ -1.36
SCFD1-208ENST00000553278 RRAGAQ7L523 313 aa6.54□□□□□ -1.36
SCFD1-208ENST00000553278 ANKS1BQ7Z6G8 1248 aa6.54□□□□□ -1.36
SCFD1-208ENST00000553278 FITM2Q8N6M3 262 aa6.54□□□□□ -1.36
SCFD1-208ENST00000553278 ANKRD52Q8NB46 1076 aa6.54□□□□□ -1.36
SCFD1-208ENST00000553278 TMIEQ8NEW7 156 aa6.54□□□□□ -1.36
SCFD1-208ENST00000553278 TDRD7Q8NHU6 1098 aaKnown RBP6.54□□□□□ -1.36
SCFD1-208ENST00000553278 MZB1Q8WU39 189 aa6.54□□□□□ -1.36
SCFD1-208ENST00000553278 WDR60Q8WVS4 1066 aa6.54□□□□□ -1.36
SCFD1-208ENST00000553278 LIN37Q96GY3 246 aaPredicted RBP6.54□□□□□ -1.36
SCFD1-208ENST00000553278 AJUBAQ96IF1 538 aa6.54□□□□□ -1.36
SCFD1-208ENST00000553278 MESP1Q9BRJ9 268 aa6.54□□□□□ -1.36
SCFD1-208ENST00000553278 AGXT2Q9BYV1 514 aa6.54□□□□□ -1.36
SCFD1-208ENST00000553278 BRD8Q9H0E9 1235 aa6.54□□□□□ -1.36
SCFD1-208ENST00000553278 EPC1Q9H2F5 836 aa6.54□□□□□ -1.36
SCFD1-208ENST00000553278 PRKRIP1Q9H875 184 aaPredicted RBP6.54□□□□□ -1.36
SCFD1-208ENST00000553278 SMYD2Q9NRG4 433 aa6.54□□□□□ -1.36
SCFD1-208ENST00000553278 ORC3Q9UBD5 711 aaPredicted RBP6.54□□□□□ -1.36
SCFD1-208ENST00000553278 HESX1Q9UBX0 185 aa6.54□□□□□ -1.36
SCFD1-208ENST00000553278 SHOC2Q9UQ13 582 aa6.54□□□□□ -1.36
SCFD1-208ENST00000553278 CDHR4A6H8M9 788 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms