RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 MAB21L3Q8N8X9 362 aa17.01■□□□□ 0.31
CDK4-215ENST00000553237 FSIP1Q8NA03 581 aa17.01■□□□□ 0.31
CDK4-215ENST00000553237 GOLGA5Q8TBA6 731 aa17.01■□□□□ 0.31
CDK4-215ENST00000553237 CLDN23Q96B33 292 aa17.01■□□□□ 0.31
CDK4-215ENST00000553237 SCAND2PQ9GZW5 306 aaPredicted RBP17.01■□□□□ 0.31
CDK4-215ENST00000553237 CRTAC1Q9NQ79 661 aa17.01■□□□□ 0.31
CDK4-215ENST00000553237 CDH9Q9ULB4 789 aa17.01■□□□□ 0.31
CDK4-215ENST00000553237 F5P12259 2224 aa17.01■□□□□ 0.31
CDK4-215ENST00000553237 CACNA1IQ9P0X4 2223 aa17.01■□□□□ 0.31
CDK4-215ENST00000553237 PTPRZ1P23471 2315 aaPredicted RBP17■□□□□ 0.31
CDK4-215ENST00000553237 GNL1P36915 607 aaPredicted RBP17■□□□□ 0.31
CDK4-215ENST00000553237 SOX9P48436 509 aa17■□□□□ 0.31
CDK4-215ENST00000553237 KPNA1P52294 538 aaPredicted RBP17■□□□□ 0.31
CDK4-215ENST00000553237 NUCB2P80303 420 aa17■□□□□ 0.31
CDK4-215ENST00000553237 CMTM8Q8IZV2 173 aa17■□□□□ 0.31
CDK4-215ENST00000553237 OR6B3Q8NGW1 331 aa17■□□□□ 0.31
CDK4-215ENST00000553237 MYLPFQ96A32 169 aa17■□□□□ 0.31
CDK4-215ENST00000553237 SNX25Q9H3E2 840 aa17■□□□□ 0.31
CDK4-215ENST00000553237 KCTD10Q9H3F6 313 aa17■□□□□ 0.31
CDK4-215ENST00000553237 GOLPH3LQ9H4A5 285 aa17■□□□□ 0.31
CDK4-215ENST00000553237 DMAC2Q9NW81 257 aa17■□□□□ 0.31
CDK4-215ENST00000553237 MAGEC2Q9UBF1 373 aaPredicted RBP17■□□□□ 0.31
CDK4-215ENST00000553237 NXF1Q9UBU9 619 aaKnown RBP17■□□□□ 0.31
CDK4-215ENST00000553237 NME7Q9Y5B8 376 aa17■□□□□ 0.31
CDK4-215ENST00000553237 FAM237AA0A1B0GTK4 181 aa16.99■□□□□ 0.31
CDK4-215ENST00000553237 NOL4O94818 638 aa16.99■□□□□ 0.31
CDK4-215ENST00000553237 CLSTN1O94985 981 aa16.99■□□□□ 0.31
CDK4-215ENST00000553237 BDNFP23560 247 aa16.99■□□□□ 0.31
CDK4-215ENST00000553237 WEE1P30291 646 aa16.99■□□□□ 0.31
CDK4-215ENST00000553237 MAGEA9P43362 315 aa16.99■□□□□ 0.31
CDK4-215ENST00000553237 TNNC1P63316 161 aa16.99■□□□□ 0.31
CDK4-215ENST00000553237 CYP27A1Q02318 531 aa16.99■□□□□ 0.31
CDK4-215ENST00000553237 CSTF1Q05048 431 aaKnown RBP16.99■□□□□ 0.31
CDK4-215ENST00000553237 BIRC3Q13489 604 aa16.99■□□□□ 0.31
CDK4-215ENST00000553237 CFAP221Q4G0U5 840 aa16.99■□□□□ 0.31
CDK4-215ENST00000553237 ARHGAP29Q52LW3 1261 aa16.99■□□□□ 0.31
CDK4-215ENST00000553237 C4orf50Q6ZRC1 276 aa16.99■□□□□ 0.31
CDK4-215ENST00000553237 ZNF687Q8N1G0 1237 aa16.99■□□□□ 0.31
CDK4-215ENST00000553237 BPIFB1Q8TDL5 484 aa16.99■□□□□ 0.31
CDK4-215ENST00000553237 PARD3BQ8TEW8 1205 aa16.99■□□□□ 0.31
CDK4-215ENST00000553237 MRPS31Q92665 395 aaKnown RBP16.99■□□□□ 0.31
CDK4-215ENST00000553237 ELMO3Q96BJ8 720 aa16.99■□□□□ 0.31
CDK4-215ENST00000553237 FUBP3Q96I24 572 aaKnown RBP eCLIP16.99■□□□□ 0.31
CDK4-215ENST00000553237 LMAN1LQ9HAT1 526 aa16.99■□□□□ 0.31
CDK4-215ENST00000553237 OBP2AQ9NY56 170 aa16.99■□□□□ 0.31
CDK4-215ENST00000553237 GTSE1Q9NYZ3 720 aa16.99■□□□□ 0.31
CDK4-215ENST00000553237 CCL26Q9Y258 94 aa16.99■□□□□ 0.31
CDK4-215ENST00000553237 MIA3Q5JRA6 1907 aa16.99■□□□□ 0.31
CDK4-215ENST00000553237 TICRRQ7Z2Z1 1910 aa16.98■□□□□ 0.31
CDK4-215ENST00000553237 USP34Q70CQ2 3546 aa16.98■□□□□ 0.31
CDK4-215ENST00000553237 MYO15AQ9UKN7 3530 aa16.98■□□□□ 0.31
CDK4-215ENST00000553237 A0A1W2PQ27 194 aa16.98■□□□□ 0.31
CDK4-215ENST00000553237 A0A1W2PQ64 194 aa16.98■□□□□ 0.31
CDK4-215ENST00000553237 A0A1W2PQD8 194 aa16.98■□□□□ 0.31
CDK4-215ENST00000553237 LRRIQ3A6PVS8 624 aaPredicted RBP16.98■□□□□ 0.31
CDK4-215ENST00000553237 NR3C1P04150 777 aa16.98■□□□□ 0.31
CDK4-215ENST00000553237 MYL1P05976 194 aa16.98■□□□□ 0.31
CDK4-215ENST00000553237 AVPR1AP37288 418 aa16.98■□□□□ 0.31
CDK4-215ENST00000553237 GRIK1P39086 918 aa16.98■□□□□ 0.31
CDK4-215ENST00000553237 RPS9P46781 194 aaKnown RBP16.98■□□□□ 0.31
CDK4-215ENST00000553237 TNK2Q07912 1038 aa16.98■□□□□ 0.31
CDK4-215ENST00000553237 MDH1BQ5I0G3 518 aa16.98■□□□□ 0.31
CDK4-215ENST00000553237 TDRD10Q5VZ19 366 aaKnown RBP16.98■□□□□ 0.31
CDK4-215ENST00000553237 KRBA2Q6ZNG9 492 aa16.98■□□□□ 0.31
CDK4-215ENST00000553237 SLC9A9Q8IVB4 645 aa16.98■□□□□ 0.31
CDK4-215ENST00000553237 CELF5Q8N6W0 485 aaKnown RBP16.98■□□□□ 0.31
CDK4-215ENST00000553237 USP13Q92995 863 aaPredicted RBP16.98■□□□□ 0.31
CDK4-215ENST00000553237 CCDC47Q96A33 483 aaKnown RBP16.98■□□□□ 0.31
CDK4-215ENST00000553237 XYLT2Q9H1B5 865 aa16.98■□□□□ 0.31
CDK4-215ENST00000553237 UXTQ9UBK9 157 aaPredicted RBP16.98■□□□□ 0.31
CDK4-215ENST00000553237 MAPK8IP1Q9UQF2 711 aa16.98■□□□□ 0.31
CDK4-215ENST00000553237 RIF1Q5UIP0 2472 aaKnown RBP16.98■□□□□ 0.31
CDK4-215ENST00000553237 PDXKO00764 312 aa16.97■□□□□ 0.31
CDK4-215ENST00000553237 TACC1O75410 805 aa16.97■□□□□ 0.31
CDK4-215ENST00000553237 TADA3O75528 432 aa16.97■□□□□ 0.31
CDK4-215ENST00000553237 ZNF202O95125 648 aa16.97■□□□□ 0.31
CDK4-215ENST00000553237 C4BPAP04003 597 aaKnown RBP16.97■□□□□ 0.31
CDK4-215ENST00000553237 DDX6P26196 483 aaKnown RBP eCLIP16.97■□□□□ 0.311e-6■■■■□ 21.2
CDK4-215ENST00000553237 ATICP31939 592 aa16.97■□□□□ 0.31
CDK4-215ENST00000553237 MAGEA11P43364 429 aa16.97■□□□□ 0.31
CDK4-215ENST00000553237 CDH8P55286 799 aa16.97■□□□□ 0.31
CDK4-215ENST00000553237 DLG4P78352 724 aa16.97■□□□□ 0.31
CDK4-215ENST00000553237 DPYDQ12882 1025 aa16.97■□□□□ 0.31
CDK4-215ENST00000553237 MTAPQ13126 283 aa16.97■□□□□ 0.31
CDK4-215ENST00000553237 MAPRE1Q15691 268 aaKnown RBP16.97■□□□□ 0.31
CDK4-215ENST00000553237 CEP135Q66GS9 1140 aa16.97■□□□□ 0.31
CDK4-215ENST00000553237 TSSK4Q6SA08 328 aa16.97■□□□□ 0.31
CDK4-215ENST00000553237 MON1AQ86VX9 555 aa16.97■□□□□ 0.31
CDK4-215ENST00000553237 ADSSL1Q8N142 457 aa16.97■□□□□ 0.31
CDK4-215ENST00000553237 TTC16Q8NEE8 873 aa16.97■□□□□ 0.31
CDK4-215ENST00000553237 MYCBPAPQ8TBZ2 947 aa16.97■□□□□ 0.31
CDK4-215ENST00000553237 SYAP1Q96A49 352 aaPredicted RBP16.97■□□□□ 0.31
CDK4-215ENST00000553237 PCED1BQ96HM7 432 aa16.97■□□□□ 0.31
CDK4-215ENST00000553237 MYRFLQ96LU7 910 aa16.97■□□□□ 0.31
CDK4-215ENST00000553237 CYP2S1Q96SQ9 504 aa16.97■□□□□ 0.31
CDK4-215ENST00000553237 DPEP3Q9H4B8 488 aa16.97■□□□□ 0.31
CDK4-215ENST00000553237 C8orf33Q9H7E9 229 aaPredicted RBP16.97■□□□□ 0.31
CDK4-215ENST00000553237 TRPC7Q9HCX4 862 aa16.97■□□□□ 0.31
CDK4-215ENST00000553237 GKN1Q9NS71 199 aa16.97■□□□□ 0.31
CDK4-215ENST00000553237 THG1LQ9NWX6 298 aaKnown RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms