RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 RTL10Q7L3V2 364 aa12.21□□□□□ -0.45
TMEM116-218ENST00000552839 CELF5Q8N6W0 485 aaKnown RBP12.21□□□□□ -0.45
TMEM116-218ENST00000552839 RNF214Q8ND24 703 aa12.21□□□□□ -0.45
TMEM116-218ENST00000552839 TMC2Q8TDI7 906 aa12.21□□□□□ -0.45
TMEM116-218ENST00000552839 ELSPBP1Q96BH3 223 aa12.21□□□□□ -0.45
TMEM116-218ENST00000552839 UROC1Q96N76 676 aa12.21□□□□□ -0.45
TMEM116-218ENST00000552839 FUCA2Q9BTY2 467 aa12.21□□□□□ -0.45
TMEM116-218ENST00000552839 MTMR12Q9C0I1 747 aa12.21□□□□□ -0.45
TMEM116-218ENST00000552839 CBX8Q9HC52 389 aa12.21□□□□□ -0.45
TMEM116-218ENST00000552839 AVENQ9NQS1 362 aaPredicted RBP12.21□□□□□ -0.45
TMEM116-218ENST00000552839 CDY1Q9Y6F8 540 aa12.21□□□□□ -0.45
TMEM116-218ENST00000552839 LRRIQ3A6PVS8 624 aaPredicted RBP12.2□□□□□ -0.46
TMEM116-218ENST00000552839 MAN2B1O00754 1011 aa12.2□□□□□ -0.46
TMEM116-218ENST00000552839 SERPINC1P01008 464 aa12.2□□□□□ -0.46
TMEM116-218ENST00000552839 RETP07949 1114 aa12.2□□□□□ -0.46
TMEM116-218ENST00000552839 TKTP29401 623 aaKnown RBP12.2□□□□□ -0.46
TMEM116-218ENST00000552839 PLCB2Q00722 1185 aa12.2□□□□□ -0.46
TMEM116-218ENST00000552839 MYL7Q01449 175 aa12.2□□□□□ -0.46
TMEM116-218ENST00000552839 MYO1EQ12965 1108 aa12.2□□□□□ -0.46
TMEM116-218ENST00000552839 FILIP1LQ4L180 1135 aa12.2□□□□□ -0.46
TMEM116-218ENST00000552839 FKBP15Q5T1M5 1219 aa12.2□□□□□ -0.46
TMEM116-218ENST00000552839 CD300LGQ6UXG3 332 aa12.2□□□□□ -0.46
TMEM116-218ENST00000552839 PRR23BQ6ZRT6 265 aa12.2□□□□□ -0.46
TMEM116-218ENST00000552839 LUZP1Q86V48 1076 aa12.2□□□□□ -0.46
TMEM116-218ENST00000552839 ZC3H3Q8IXZ2 948 aaKnown RBP12.2□□□□□ -0.46
TMEM116-218ENST00000552839 TMEM174Q8WUU8 243 aa12.2□□□□□ -0.46
TMEM116-218ENST00000552839 TCEAL4Q96EI5 215 aa12.2□□□□□ -0.46
TMEM116-218ENST00000552839 DDX27Q96GQ7 796 aaKnown RBP12.2□□□□□ -0.46
TMEM116-218ENST00000552839 BRD9Q9H8M2 597 aa12.2□□□□□ -0.46
TMEM116-218ENST00000552839 LMAN1LQ9HAT1 526 aa12.2□□□□□ -0.46
TMEM116-218ENST00000552839 SAMSN1Q9NSI8 373 aaKnown RBP12.2□□□□□ -0.46
TMEM116-218ENST00000552839 SEMA4GQ9NTN9 838 aa12.2□□□□□ -0.46
TMEM116-218ENST00000552839 FANCLQ9NW38 375 aa12.2□□□□□ -0.46
TMEM116-218ENST00000552839 DPP3Q9NY33 737 aa12.2□□□□□ -0.46
TMEM116-218ENST00000552839 TUBGCP4Q9UGJ1 667 aa12.2□□□□□ -0.46
TMEM116-218ENST00000552839 ITGA11Q9UKX5 1188 aa12.2□□□□□ -0.46
TMEM116-218ENST00000552839 GREB1Q4ZG55 1949 aa12.19□□□□□ -0.46
TMEM116-218ENST00000552839 ARHGEF37A1IGU5 675 aa12.19□□□□□ -0.46
TMEM116-218ENST00000552839 TMEM189-UBE2V1I3L0A0 370 aa12.19□□□□□ -0.46
TMEM116-218ENST00000552839 PODXLO00592 558 aa12.19□□□□□ -0.46
TMEM116-218ENST00000552839 GDF9O60383 454 aa12.19□□□□□ -0.46
TMEM116-218ENST00000552839 LRP3O75074 770 aa12.19□□□□□ -0.46
TMEM116-218ENST00000552839 B3GAT3O94766 335 aa12.19□□□□□ -0.46
TMEM116-218ENST00000552839 AFPP02771 609 aaKnown RBP12.19□□□□□ -0.46
TMEM116-218ENST00000552839 TPM3P06753 285 aa12.19□□□□□ -0.46
TMEM116-218ENST00000552839 PTPN2P17706 415 aa12.19□□□□□ -0.46
TMEM116-218ENST00000552839 CYP3A5P20815 502 aa12.19□□□□□ -0.46
TMEM116-218ENST00000552839 GCLMP48507 274 aa12.19□□□□□ -0.46
TMEM116-218ENST00000552839 PPP2R5DQ14738 602 aa12.19□□□□□ -0.46
TMEM116-218ENST00000552839 MAN2A1Q16706 1144 aa12.19□□□□□ -0.46
TMEM116-218ENST00000552839 FAM78AQ5JUQ0 283 aa12.19□□□□□ -0.46
TMEM116-218ENST00000552839 PRSS36Q5K4E3 855 aa12.19□□□□□ -0.46
TMEM116-218ENST00000552839 KRT39Q6A163 491 aa12.19□□□□□ -0.46
TMEM116-218ENST00000552839 PRR23CQ6ZRP0 262 aa12.19□□□□□ -0.46
TMEM116-218ENST00000552839 EFCAB13Q8IY85 973 aa12.19□□□□□ -0.46
TMEM116-218ENST00000552839 PARD3BQ8TEW8 1205 aa12.19□□□□□ -0.46
TMEM116-218ENST00000552839 FAM3CQ92520 227 aa12.19□□□□□ -0.46
TMEM116-218ENST00000552839 C18orf25Q96B23 403 aaPredicted RBP12.19□□□□□ -0.46
TMEM116-218ENST00000552839 PCMTD1Q96MG8 357 aaPredicted RBP12.19□□□□□ -0.46
TMEM116-218ENST00000552839 PPP1R10Q96QC0 940 aaKnown RBP12.19□□□□□ -0.46
TMEM116-218ENST00000552839 IER2Q9BTL4 223 aa12.19□□□□□ -0.46
TMEM116-218ENST00000552839 TRMT61BQ9BVS5 477 aaKnown RBP12.19□□□□□ -0.46
TMEM116-218ENST00000552839 GOLGA2P5Q9HBQ8 144 aa12.19□□□□□ -0.46
TMEM116-218ENST00000552839 ZFP14Q9HCL3 533 aa12.19□□□□□ -0.46
TMEM116-218ENST00000552839 ZNF334Q9HCZ1 680 aaPredicted RBP12.19□□□□□ -0.46
TMEM116-218ENST00000552839 INTS13Q9NVM9 706 aa12.19□□□□□ -0.46
TMEM116-218ENST00000552839 TAB2Q9NYJ8 693 aa12.19□□□□□ -0.46
TMEM116-218ENST00000552839 BACE2Q9Y5Z0 518 aa12.19□□□□□ -0.46
TMEM116-218ENST00000552839 I3L4J1 428 aa12.18□□□□□ -0.46
TMEM116-218ENST00000552839 HRO43593 1189 aa12.18□□□□□ -0.46
TMEM116-218ENST00000552839 TRAPPC3O43617 180 aa12.18□□□□□ -0.46
TMEM116-218ENST00000552839 LRG1P02750 347 aa12.18□□□□□ -0.46
TMEM116-218ENST00000552839 ITGB3P05106 788 aa12.18□□□□□ -0.46
TMEM116-218ENST00000552839 CHRNB1P11230 501 aa12.18□□□□□ -0.46
TMEM116-218ENST00000552839 P4HA1P13674 534 aa12.18□□□□□ -0.46
TMEM116-218ENST00000552839 POLR2BP30876 1174 aaKnown RBP12.18□□□□□ -0.46
TMEM116-218ENST00000552839 GTF2H1P32780 548 aa12.18□□□□□ -0.46
TMEM116-218ENST00000552839 RPL9P32969 192 aaKnown RBP12.18□□□□□ -0.46
TMEM116-218ENST00000552839 PNPLA4P41247 253 aa12.18□□□□□ -0.46
TMEM116-218ENST00000552839 CCR2P41597 374 aa12.18□□□□□ -0.46
TMEM116-218ENST00000552839 BRCC3P46736 316 aa12.18□□□□□ -0.46
TMEM116-218ENST00000552839 CCR3P51677 355 aa12.18□□□□□ -0.46
TMEM116-218ENST00000552839 CLCNKBP51801 687 aa12.18□□□□□ -0.46
TMEM116-218ENST00000552839 GUCY2FP51841 1108 aa12.18□□□□□ -0.46
TMEM116-218ENST00000552839 RBP5P82980 135 aa12.18□□□□□ -0.46
TMEM116-218ENST00000552839 SATB1Q01826 763 aa12.18□□□□□ -0.46
TMEM116-218ENST00000552839 ROR1Q01973 937 aa12.18□□□□□ -0.46
TMEM116-218ENST00000552839 ENPEPQ07075 957 aa12.18□□□□□ -0.46
TMEM116-218ENST00000552839 DMWDQ09019 674 aa12.18□□□□□ -0.46
TMEM116-218ENST00000552839 GAS6Q14393 721 aa12.18□□□□□ -0.46
TMEM116-218ENST00000552839 SV2CQ496J9 727 aa12.18□□□□□ -0.46
TMEM116-218ENST00000552839 TCP11X2Q5H9J9 407 aa12.18□□□□□ -0.46
TMEM116-218ENST00000552839 WDR44Q5JSH3 913 aa12.18□□□□□ -0.46
TMEM116-218ENST00000552839 VITQ6UXI7 678 aa12.18□□□□□ -0.46
TMEM116-218ENST00000552839 DSTYKQ6XUX3 929 aa12.18□□□□□ -0.46
TMEM116-218ENST00000552839 ANKS3Q6ZW76 656 aa12.18□□□□□ -0.46
TMEM116-218ENST00000552839 DHX40Q8IX18 779 aaKnown RBP12.18□□□□□ -0.46
TMEM116-218ENST00000552839 ZNF461Q8TAF7 563 aa12.18□□□□□ -0.46
TMEM116-218ENST00000552839 ZMAT2Q96NC0 199 aaKnown RBP12.18□□□□□ -0.46
TMEM116-218ENST00000552839 ASB16Q96NS5 453 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms