RNA–Protein interactions for RNA: ENST00000552713.5

CDK4-213, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-213ENST00000552713 K7EQS6 105 aa9.17□□□□□ -0.94
CDK4-213ENST00000552713 PIRO00625 290 aa9.17□□□□□ -0.94
CDK4-213ENST00000552713 ZIC2O95409 532 aaPredicted RBP9.17□□□□□ -0.94
CDK4-213ENST00000552713 CYP11A1P05108 521 aa9.17□□□□□ -0.94
CDK4-213ENST00000552713 ADRB2P07550 413 aa9.17□□□□□ -0.94
CDK4-213ENST00000552713 CHRM1P11229 460 aaPredicted RBP9.17□□□□□ -0.94
CDK4-213ENST00000552713 PLS3P13797 630 aa9.17□□□□□ -0.94
CDK4-213ENST00000552713 PTGER3P43115 390 aa9.17□□□□□ -0.94
CDK4-213ENST00000552713 MAPK8P45983 427 aa9.17□□□□□ -0.94
CDK4-213ENST00000552713 PPP2R3AQ06190 1150 aa9.17□□□□□ -0.94
CDK4-213ENST00000552713 MESP2Q0VG99 397 aa9.17□□□□□ -0.94
CDK4-213ENST00000552713 STRN3Q13033 797 aa9.17□□□□□ -0.94
CDK4-213ENST00000552713 TRIM29Q14134 588 aa9.17□□□□□ -0.94
CDK4-213ENST00000552713 MTF1Q14872 753 aa9.17□□□□□ -0.94
CDK4-213ENST00000552713 ZNF77Q15935 545 aa9.17□□□□□ -0.94
CDK4-213ENST00000552713 TAF12Q16514 161 aa9.17□□□□□ -0.94
CDK4-213ENST00000552713 GAB4Q2WGN9 574 aa9.17□□□□□ -0.94
CDK4-213ENST00000552713 EML3Q32P44 896 aa9.17□□□□□ -0.94
CDK4-213ENST00000552713 ZC2HC1CQ53FD0 456 aaPredicted RBP9.17□□□□□ -0.94
CDK4-213ENST00000552713 USP39Q53GS9 565 aaKnown RBP9.17□□□□□ -0.94
CDK4-213ENST00000552713 C2orf27AQ580R0 203 aa9.17□□□□□ -0.94
CDK4-213ENST00000552713 TRIM61Q5EBN2 209 aa9.17□□□□□ -0.94
CDK4-213ENST00000552713 WSCD1Q658N2 575 aa9.17□□□□□ -0.94
CDK4-213ENST00000552713 SCARA3Q6AZY7 606 aa9.17□□□□□ -0.94
CDK4-213ENST00000552713 CC2D1AQ6P1N0 951 aaPredicted RBP9.17□□□□□ -0.94
CDK4-213ENST00000552713 TMEM92Q6UXU6 159 aa9.17□□□□□ -0.94
CDK4-213ENST00000552713 ZPBP2Q6X784 338 aa9.17□□□□□ -0.94
CDK4-213ENST00000552713 PIP4P1Q86T03 277 aa9.17□□□□□ -0.94
CDK4-213ENST00000552713 MON1AQ86VX9 555 aa9.17□□□□□ -0.94
CDK4-213ENST00000552713 CCDC33Q8N5R6 958 aa9.17□□□□□ -0.94
CDK4-213ENST00000552713 IGSF22Q8N9C0 903 aa9.17□□□□□ -0.94
CDK4-213ENST00000552713 SPIRE2Q8WWL2 714 aa9.17□□□□□ -0.94
CDK4-213ENST00000552713 ACDQ96AP0 544 aa9.17□□□□□ -0.94
CDK4-213ENST00000552713 FNBP1Q96RU3 617 aa9.17□□□□□ -0.94
CDK4-213ENST00000552713 C17orf75Q9HAS0 396 aa9.17□□□□□ -0.94
CDK4-213ENST00000552713 DUS2Q9NX74 493 aaKnown RBP9.17□□□□□ -0.94
CDK4-213ENST00000552713 MBD1Q9UIS9 605 aaPredicted RBP9.17□□□□□ -0.94
CDK4-213ENST00000552713 MAGED2Q9UNF1 606 aaPredicted RBP9.17□□□□□ -0.94
CDK4-213ENST00000552713 DNM3Q9UQ16 869 aa9.17□□□□□ -0.94
CDK4-213ENST00000552713 DSPP15924 2871 aaKnown RBP9.17□□□□□ -0.94
CDK4-213ENST00000552713 KNL1Q8NG31 2342 aa9.16□□□□□ -0.94
CDK4-213ENST00000552713 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.16□□□□□ -0.94
CDK4-213ENST00000552713 CYB561D2O14569 222 aa9.16□□□□□ -0.94
CDK4-213ENST00000552713 GUCY2CP25092 1073 aa9.16□□□□□ -0.94
CDK4-213ENST00000552713 OPRD1P41143 372 aa9.16□□□□□ -0.94
CDK4-213ENST00000552713 TOB1P50616 345 aaPredicted RBP9.16□□□□□ -0.94
CDK4-213ENST00000552713 SIM1P81133 766 aaPredicted RBP9.16□□□□□ -0.94
CDK4-213ENST00000552713 ZXDBP98169 803 aa9.16□□□□□ -0.94
CDK4-213ENST00000552713 AMPD2Q01433 879 aa9.16□□□□□ -0.94
CDK4-213ENST00000552713 USP4Q13107 963 aa9.16□□□□□ -0.94
CDK4-213ENST00000552713 PDIA5Q14554 519 aa9.16□□□□□ -0.94
CDK4-213ENST00000552713 ZNF268Q14587 947 aaPredicted RBP9.16□□□□□ -0.94
CDK4-213ENST00000552713 PDGFRLQ15198 375 aa9.16□□□□□ -0.94
CDK4-213ENST00000552713 CCDC142Q17RM4 750 aa9.16□□□□□ -0.94
CDK4-213ENST00000552713 SLC39A4Q6P5W5 647 aa9.16□□□□□ -0.94
CDK4-213ENST00000552713 TTC30AQ86WT1 665 aa9.16□□□□□ -0.94
CDK4-213ENST00000552713 EFCAB13Q8IY85 973 aa9.16□□□□□ -0.94
CDK4-213ENST00000552713 TMEFF1Q8IYR6 380 aa9.16□□□□□ -0.94
CDK4-213ENST00000552713 CHCHD4Q8N4Q1 142 aa9.16□□□□□ -0.94
CDK4-213ENST00000552713 CPA6Q8N4T0 437 aa9.16□□□□□ -0.94
CDK4-213ENST00000552713 OR2I1PQ8NGU4 316 aa9.16□□□□□ -0.94
CDK4-213ENST00000552713 OLIG1Q8TAK6 271 aa9.16□□□□□ -0.94
CDK4-213ENST00000552713 LRRC15Q8TF66 581 aa9.16□□□□□ -0.94
CDK4-213ENST00000552713 OSCP1Q8WVF1 389 aa9.16□□□□□ -0.94
CDK4-213ENST00000552713 CNOT6LQ96LI5 555 aaKnown RBP9.16□□□□□ -0.94
CDK4-213ENST00000552713 PNMA5Q96PV4 448 aa9.16□□□□□ -0.94
CDK4-213ENST00000552713 PLIN2Q99541 437 aa9.16□□□□□ -0.94
CDK4-213ENST00000552713 PYM1Q9BRP8 204 aaKnown RBP9.16□□□□□ -0.94
CDK4-213ENST00000552713 PI4K2AQ9BTU6 479 aa9.16□□□□□ -0.94
CDK4-213ENST00000552713 RPF1Q9H9Y2 349 aaKnown RBP9.16□□□□□ -0.94
CDK4-213ENST00000552713 KIF9Q9HAQ2 790 aa9.16□□□□□ -0.94
CDK4-213ENST00000552713 ZDHHC4Q9NPG8 344 aa9.16□□□□□ -0.94
CDK4-213ENST00000552713 EVLQ9UI08 416 aaPredicted RBP9.16□□□□□ -0.94
CDK4-213ENST00000552713 GPSM3Q9Y4H4 160 aa9.16□□□□□ -0.94
CDK4-213ENST00000552713 PCDHB6Q9Y5E3 794 aa9.16□□□□□ -0.94
CDK4-213ENST00000552713 CABIN1Q9Y6J0 2220 aa9.15□□□□□ -0.94
CDK4-213ENST00000552713 C2orf78A6NCI8 922 aa9.15□□□□□ -0.94
CDK4-213ENST00000552713 TISP43B9A030 160 aa9.15□□□□□ -0.94
CDK4-213ENST00000552713 PYGBP11216 843 aa9.15□□□□□ -0.94
CDK4-213ENST00000552713 ENGP17813 658 aa9.15□□□□□ -0.94
CDK4-213ENST00000552713 DDX6P26196 483 aaKnown RBP eCLIP9.15□□□□□ -0.94
CDK4-213ENST00000552713 FAM160A1Q05DH4 1040 aa9.15□□□□□ -0.94
CDK4-213ENST00000552713 SEMA3BQ13214 749 aa9.15□□□□□ -0.94
CDK4-213ENST00000552713 ORC2Q13416 577 aaPredicted RBP9.15□□□□□ -0.94
CDK4-213ENST00000552713 SAFBQ15424 915 aaKnown RBP eCLIP9.15□□□□□ -0.94
CDK4-213ENST00000552713 ZRSR1Q15695 479 aaKnown RBP9.15□□□□□ -0.94
CDK4-213ENST00000552713 CRY1Q16526 586 aa9.15□□□□□ -0.94
CDK4-213ENST00000552713 DDR2Q16832 855 aa9.15□□□□□ -0.94
CDK4-213ENST00000552713 ARSHQ5FYA8 562 aa9.15□□□□□ -0.94
CDK4-213ENST00000552713 EMC10Q5UCC4 262 aa9.15□□□□□ -0.94
CDK4-213ENST00000552713 PROSER1Q86XN7 944 aa9.15□□□□□ -0.94
CDK4-213ENST00000552713 ARL14EPQ8N8R7 260 aaPredicted RBP9.15□□□□□ -0.94
CDK4-213ENST00000552713 SPPL2BQ8TCT7 592 aa9.15□□□□□ -0.94
CDK4-213ENST00000552713 MRPS31Q92665 395 aaKnown RBP9.15□□□□□ -0.94
CDK4-213ENST00000552713 RNF25Q96BH1 459 aaPredicted RBP9.15□□□□□ -0.94
CDK4-213ENST00000552713 BICD1Q96G01 975 aa9.15□□□□□ -0.94
CDK4-213ENST00000552713 FOXP1Q9H334 677 aaPredicted RBP9.15□□□□□ -0.94
CDK4-213ENST00000552713 TRPC7Q9HCX4 862 aa9.15□□□□□ -0.94
CDK4-213ENST00000552713 GCNT4Q9P109 453 aa9.15□□□□□ -0.94
CDK4-213ENST00000552713 ZMYM5Q9UJ78 669 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms