RNA–Protein interactions for RNA: ENST00000552162.5

RAB5C-209, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5C, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-209ENST00000552162 AK8Q96MA6 479 aa17.58■□□□□ 0.4
RAB5C-209ENST00000552162 ZNF560Q96MR9 790 aa17.58■□□□□ 0.4
RAB5C-209ENST00000552162 TRPC7Q9HCX4 862 aa17.58■□□□□ 0.4
RAB5C-209ENST00000552162 DUS2Q9NX74 493 aaKnown RBP17.58■□□□□ 0.4
RAB5C-209ENST00000552162 UXTQ9UBK9 157 aaPredicted RBP17.58■□□□□ 0.4
RAB5C-209ENST00000552162 HELZP42694 1942 aaKnown RBP17.58■□□□□ 0.4
RAB5C-209ENST00000552162 SPEGQ15772 3267 aa17.58■□□□□ 0.4
RAB5C-209ENST00000552162 IFNAR2P48551 515 aa17.57■□□□□ 0.4
RAB5C-209ENST00000552162 DGKEP52429 567 aa17.57■□□□□ 0.4
RAB5C-209ENST00000552162 ZNF252P-AS1Q0IIN9 211 aa17.57■□□□□ 0.4
RAB5C-209ENST00000552162 USP4Q13107 963 aa17.57■□□□□ 0.4
RAB5C-209ENST00000552162 MCM6Q14566 821 aa17.57■□□□□ 0.4
RAB5C-209ENST00000552162 DDR2Q16832 855 aa17.57■□□□□ 0.4
RAB5C-209ENST00000552162 ZC2HC1CQ53FD0 456 aaPredicted RBP17.57■□□□□ 0.4
RAB5C-209ENST00000552162 DAB2IPQ5VWQ8 1189 aa17.57■□□□□ 0.4
RAB5C-209ENST00000552162 LEO1Q8WVC0 666 aaPredicted RBP17.57■□□□□ 0.4
RAB5C-209ENST00000552162 TRMT2BQ96GJ1 504 aaKnown RBP17.57■□□□□ 0.4
RAB5C-209ENST00000552162 TMEM206Q9H813 350 aa17.57■□□□□ 0.4
RAB5C-209ENST00000552162 BLOC1S4Q9NUP1 217 aa17.57■□□□□ 0.4
RAB5C-209ENST00000552162 KIF3AQ9Y496 699 aa17.57■□□□□ 0.4
RAB5C-209ENST00000552162 WNT6Q9Y6F9 365 aa17.57■□□□□ 0.4
RAB5C-209ENST00000552162 STYXL1Q9Y6J8 313 aa17.57■□□□□ 0.4
RAB5C-209ENST00000552162 ANAPC1Q9H1A4 1944 aa17.57■□□□□ 0.4
RAB5C-209ENST00000552162 ASPMQ8IZT6 3477 aa17.56■□□□□ 0.4
RAB5C-209ENST00000552162 NOL4O94818 638 aa17.56■□□□□ 0.4
RAB5C-209ENST00000552162 CKMP06732 381 aa17.56■□□□□ 0.4
RAB5C-209ENST00000552162 PLCG1P19174 1290 aa17.56■□□□□ 0.4
RAB5C-209ENST00000552162 UBA7P41226 1012 aa17.56■□□□□ 0.4
RAB5C-209ENST00000552162 PNPLA4P41247 253 aa17.56■□□□□ 0.4
RAB5C-209ENST00000552162 RPL10AP62906 217 aaKnown RBP17.56■□□□□ 0.4
RAB5C-209ENST00000552162 FOXC1Q12948 553 aa17.56■□□□□ 0.4
RAB5C-209ENST00000552162 EML3Q32P44 896 aa17.56■□□□□ 0.4
RAB5C-209ENST00000552162 SH3PXD2AQ5TCZ1 1133 aa17.56■□□□□ 0.4
RAB5C-209ENST00000552162 PMS2CLQ68D20 193 aa17.56■□□□□ 0.4
RAB5C-209ENST00000552162 PDCL2Q8N4E4 241 aa17.56■□□□□ 0.4
RAB5C-209ENST00000552162 TSTD1Q8NFU3 115 aa17.56■□□□□ 0.4
RAB5C-209ENST00000552162 RAD54LQ92698 747 aa17.56■□□□□ 0.4
RAB5C-209ENST00000552162 SLC22A12Q96S37 553 aa17.56■□□□□ 0.4
RAB5C-209ENST00000552162 TPSD1Q9BZJ3 242 aa17.56■□□□□ 0.4
RAB5C-209ENST00000552162 ABCB6Q9NP58 842 aa17.56■□□□□ 0.4
RAB5C-209ENST00000552162 INVSQ9Y283 1065 aa17.56■□□□□ 0.4
RAB5C-209ENST00000552162 THADAQ6YHU6 1953 aa17.56■□□□□ 0.4
RAB5C-209ENST00000552162 ABCA7Q8IZY2 2146 aa17.56■□□□□ 0.4
RAB5C-209ENST00000552162 BAHCC1Q9P281 2608 aa17.55■□□□□ 0.4
RAB5C-209ENST00000552162 TRAV19A0A0A6YYK7 116 aa17.55■□□□□ 0.4
RAB5C-209ENST00000552162 IL18RAPO95256 599 aa17.55■□□□□ 0.4
RAB5C-209ENST00000552162 USP17L7P0C7H9 530 aa17.55■□□□□ 0.4
RAB5C-209ENST00000552162 ACAT1P24752 427 aaKnown RBP17.55■□□□□ 0.4
RAB5C-209ENST00000552162 CYP2F1P24903 491 aa17.55■□□□□ 0.4
RAB5C-209ENST00000552162 POU5F1Q01860 360 aaKnown RBP17.55■□□□□ 0.4
RAB5C-209ENST00000552162 INTS6LQ5JSJ4 861 aaKnown RBP17.55■□□□□ 0.4
RAB5C-209ENST00000552162 CRELD2Q6UXH1 353 aaPredicted RBP17.55■□□□□ 0.4
RAB5C-209ENST00000552162 C11orf74Q86VG3 221 aa17.55■□□□□ 0.4
RAB5C-209ENST00000552162 NT5DC4Q86YG4 428 aa17.55■□□□□ 0.4
RAB5C-209ENST00000552162 RASSF8Q8NHQ8 419 aa17.55■□□□□ 0.4
RAB5C-209ENST00000552162 POMGNT1Q8WZA1 660 aa17.55■□□□□ 0.4
RAB5C-209ENST00000552162 MYRFLQ96LU7 910 aa17.55■□□□□ 0.4
RAB5C-209ENST00000552162 CYP2S1Q96SQ9 504 aa17.55■□□□□ 0.4
RAB5C-209ENST00000552162 ACBD6Q9BR61 282 aa17.55■□□□□ 0.4
RAB5C-209ENST00000552162 IKZF4Q9H2S9 585 aa17.55■□□□□ 0.4
RAB5C-209ENST00000552162 DDX43Q9NXZ2 648 aaKnown RBP17.55■□□□□ 0.4
RAB5C-209ENST00000552162 ZMIZ1Q9ULJ6 1067 aa17.55■□□□□ 0.4
RAB5C-209ENST00000552162 L1RE1Q9UN81 338 aa17.55■□□□□ 0.4
RAB5C-209ENST00000552162 ATRXP46100 2492 aa17.54■□□□□ 0.4
RAB5C-209ENST00000552162 KHNYNO15037 678 aaKnown RBP17.54■□□□□ 0.4
RAB5C-209ENST00000552162 POLR2BP30876 1174 aaKnown RBP17.54■□□□□ 0.4
RAB5C-209ENST00000552162 USP39Q53GS9 565 aaKnown RBP17.54■□□□□ 0.4
RAB5C-209ENST00000552162 CYP2U1Q7Z449 544 aa17.54■□□□□ 0.4
RAB5C-209ENST00000552162 CCDC26Q8TAB7 109 aa17.54■□□□□ 0.4
RAB5C-209ENST00000552162 PKMYT1Q99640 499 aa17.54■□□□□ 0.4
RAB5C-209ENST00000552162 KIF2CQ99661 725 aa17.54■□□□□ 0.4
RAB5C-209ENST00000552162 ST6GALNAC4Q9H4F1 302 aa17.54■□□□□ 0.4
RAB5C-209ENST00000552162 TMEM9BQ9NQ34 198 aa17.54■□□□□ 0.4
RAB5C-209ENST00000552162 WASF3Q9UPY6 502 aa17.54■□□□□ 0.4
RAB5C-209ENST00000552162 AKAP13Q12802 2813 aa17.53■□□□□ 0.4
RAB5C-209ENST00000552162 PATE3B3GLJ2 98 aa17.53■□□□□ 0.4
RAB5C-209ENST00000552162 TULP1O00294 542 aaPredicted RBP17.53■□□□□ 0.4
RAB5C-209ENST00000552162 HUS1O60921 280 aa17.53■□□□□ 0.4
RAB5C-209ENST00000552162 ITGB3P05106 788 aa17.53■□□□□ 0.4
RAB5C-209ENST00000552162 SPINK2P20155 84 aa17.53■□□□□ 0.4
RAB5C-209ENST00000552162 ADSSP30520 456 aa17.53■□□□□ 0.4
RAB5C-209ENST00000552162 SEC13P55735 322 aa17.53■□□□□ 0.4
RAB5C-209ENST00000552162 WNT7BP56706 349 aa17.53■□□□□ 0.4
RAB5C-209ENST00000552162 TFAMQ00059 246 aaKnown RBP17.53■□□□□ 0.4
RAB5C-209ENST00000552162 MYL7Q01449 175 aa17.53■□□□□ 0.4
RAB5C-209ENST00000552162 NR1H3Q13133 447 aa17.53■□□□□ 0.4
RAB5C-209ENST00000552162 KCNB1Q14721 858 aa17.53■□□□□ 0.4
RAB5C-209ENST00000552162 CCDC142Q17RM4 750 aa17.53■□□□□ 0.4
RAB5C-209ENST00000552162 ANO7Q6IWH7 933 aa17.53■□□□□ 0.4
RAB5C-209ENST00000552162 RASSF3Q86WH2 238 aa17.53■□□□□ 0.4
RAB5C-209ENST00000552162 TMEM86AQ8N2M4 240 aa17.53■□□□□ 0.4
RAB5C-209ENST00000552162 ARL14EPQ8N8R7 260 aaPredicted RBP17.53■□□□□ 0.4
RAB5C-209ENST00000552162 SH3RF2Q8TEC5 729 aa17.53■□□□□ 0.4
RAB5C-209ENST00000552162 USP33Q8TEY7 942 aa17.53■□□□□ 0.4
RAB5C-209ENST00000552162 LARP4BQ92615 738 aaKnown RBP17.53■□□□□ 0.4
RAB5C-209ENST00000552162 ADAM33Q9BZ11 813 aa17.53■□□□□ 0.4
RAB5C-209ENST00000552162 GTF3C4Q9UKN8 822 aa17.53■□□□□ 0.4
RAB5C-209ENST00000552162 AGAP1Q9UPQ3 857 aa17.53■□□□□ 0.4
RAB5C-209ENST00000552162 ZFYVE26Q68DK2 2539 aa17.53■□□□□ 0.4
RAB5C-209ENST00000552162 PTPRDP23468 1912 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms