RNA–Protein interactions for RNA: ENST00000551418.5

PRPF40B-215, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-215ENST00000551418 CCDC39Q9UFE4 941 aa19.24■□□□□ 0.67
PRPF40B-215ENST00000551418 PTPRJQ12913 1337 aa19.24■□□□□ 0.67
PRPF40B-215ENST00000551418 ANTXRLA6NF34 631 aa19.23■□□□□ 0.67
PRPF40B-215ENST00000551418 LRP3O75074 770 aa19.23■□□□□ 0.67
PRPF40B-215ENST00000551418 KRT37O76014 449 aa19.23■□□□□ 0.67
PRPF40B-215ENST00000551418 GAP43P17677 238 aa19.23■□□□□ 0.67
PRPF40B-215ENST00000551418 SOWAHAQ2M3V2 549 aa19.23■□□□□ 0.67
PRPF40B-215ENST00000551418 PPM1JQ5JR12 505 aa19.23■□□□□ 0.67
PRPF40B-215ENST00000551418 KBTBD6Q86V97 674 aa19.23■□□□□ 0.67
PRPF40B-215ENST00000551418 MRPS31Q92665 395 aaKnown RBP19.23■□□□□ 0.67
PRPF40B-215ENST00000551418 HPS3Q969F9 1004 aa19.23■□□□□ 0.67
PRPF40B-215ENST00000551418 ACBD6Q9BR61 282 aa19.23■□□□□ 0.67
PRPF40B-215ENST00000551418 MTMR12Q9C0I1 747 aa19.23■□□□□ 0.67
PRPF40B-215ENST00000551418 ARRDC1-AS1Q9H2J1 176 aa19.23■□□□□ 0.67
PRPF40B-215ENST00000551418 SMOC1Q9H4F8 434 aa19.23■□□□□ 0.67
PRPF40B-215ENST00000551418 SEL1LQ9UBV2 794 aa19.23■□□□□ 0.67
PRPF40B-215ENST00000551418 EXOC7Q9UPT5 735 aa19.23■□□□□ 0.67
PRPF40B-215ENST00000551418 SNX9Q9Y5X1 595 aa19.23■□□□□ 0.67
PRPF40B-215ENST00000551418 MYO16Q9Y6X6 1858 aa19.22■□□□□ 0.67
PRPF40B-215ENST00000551418 HUS1O60921 280 aa19.22■□□□□ 0.67
PRPF40B-215ENST00000551418 RNF40O75150 1001 aa19.22■□□□□ 0.67
PRPF40B-215ENST00000551418 NOL4O94818 638 aa19.22■□□□□ 0.67
PRPF40B-215ENST00000551418 KRT19P08727 400 aa19.22■□□□□ 0.67
PRPF40B-215ENST00000551418 CSH1P0DML2 217 aa19.22■□□□□ 0.67
PRPF40B-215ENST00000551418 CSH2P0DML3 217 aa19.22■□□□□ 0.67
PRPF40B-215ENST00000551418 PNPLA4P41247 253 aa19.22■□□□□ 0.67
PRPF40B-215ENST00000551418 GRSF1Q12849 480 aaKnown RBP eCLIP19.22■□□□□ 0.67
PRPF40B-215ENST00000551418 NFE2Q16621 373 aaPredicted RBP19.22■□□□□ 0.67
PRPF40B-215ENST00000551418 SYCP3Q8IZU3 236 aa19.22■□□□□ 0.67
PRPF40B-215ENST00000551418 OR5B17Q8NGF7 314 aa19.22■□□□□ 0.67
PRPF40B-215ENST00000551418 LEO1Q8WVC0 666 aaPredicted RBP19.22■□□□□ 0.67
PRPF40B-215ENST00000551418 TRPC7Q9HCX4 862 aa19.22■□□□□ 0.67
PRPF40B-215ENST00000551418 GDAP2Q9NXN4 497 aa19.22■□□□□ 0.67
PRPF40B-215ENST00000551418 WNT6Q9Y6F9 365 aa19.22■□□□□ 0.67
PRPF40B-215ENST00000551418 CNOT1A5YKK6 2376 aaKnown RBP19.22■□□□□ 0.67
PRPF40B-215ENST00000551418 FRMD3A2A2Y4 597 aa19.21■□□□□ 0.67
PRPF40B-215ENST00000551418 C2orf78A6NCI8 922 aa19.21■□□□□ 0.67
PRPF40B-215ENST00000551418 GABRDO14764 452 aa19.21■□□□□ 0.67
PRPF40B-215ENST00000551418 ADRB1P08588 477 aa19.21■□□□□ 0.67
PRPF40B-215ENST00000551418 SYT1P21579 422 aa19.21■□□□□ 0.67
PRPF40B-215ENST00000551418 GARTP22102 1010 aa19.21■□□□□ 0.67
PRPF40B-215ENST00000551418 LMO2P25791 158 aa19.21■□□□□ 0.67
PRPF40B-215ENST00000551418 DDX6P26196 483 aaKnown RBP eCLIP19.21■□□□□ 0.67
PRPF40B-215ENST00000551418 GJA4P35212 333 aa19.21■□□□□ 0.67
PRPF40B-215ENST00000551418 SCN4BQ8IWT1 228 aa19.21■□□□□ 0.67
PRPF40B-215ENST00000551418 LRRC52Q8N7C0 313 aa19.21■□□□□ 0.67
PRPF40B-215ENST00000551418 ARL14EPQ8N8R7 260 aaPredicted RBP19.21■□□□□ 0.67
PRPF40B-215ENST00000551418 CACTINQ8WUQ7 758 aaKnown RBP19.21■□□□□ 0.67
PRPF40B-215ENST00000551418 GAB3Q8WWW8 586 aa19.21■□□□□ 0.67
PRPF40B-215ENST00000551418 HHIPQ96QV1 700 aa19.21■□□□□ 0.67
PRPF40B-215ENST00000551418 USP28Q96RU2 1077 aa19.21■□□□□ 0.67
PRPF40B-215ENST00000551418 LINC00597Q9H2U6 94 aa19.21■□□□□ 0.67
PRPF40B-215ENST00000551418 OLFML3Q9NRN5 406 aa19.21■□□□□ 0.67
PRPF40B-215ENST00000551418 PANK4Q9NVE7 773 aa19.21■□□□□ 0.67
PRPF40B-215ENST00000551418 PCDHB13Q9Y5F0 798 aa19.21■□□□□ 0.67
PRPF40B-215ENST00000551418 KMT2BQ9UMN6 2715 aaPredicted RBP19.2■□□□□ 0.66
PRPF40B-215ENST00000551418 RPP40O75818 363 aaKnown RBP19.2■□□□□ 0.66
PRPF40B-215ENST00000551418 HOXD13P35453 343 aa19.2■□□□□ 0.66
PRPF40B-215ENST00000551418 PSMC1P62191 440 aaKnown RBP19.2■□□□□ 0.66
PRPF40B-215ENST00000551418 RPL10AP62906 217 aaKnown RBP19.2■□□□□ 0.66
PRPF40B-215ENST00000551418 RBP5P82980 135 aa19.2■□□□□ 0.66
PRPF40B-215ENST00000551418 ZXDBP98169 803 aa19.2■□□□□ 0.66
PRPF40B-215ENST00000551418 MYL7Q01449 175 aa19.2■□□□□ 0.66
PRPF40B-215ENST00000551418 ZNF268Q14587 947 aaPredicted RBP19.2■□□□□ 0.66
PRPF40B-215ENST00000551418 MTF1Q14872 753 aa19.2■□□□□ 0.66
PRPF40B-215ENST00000551418 CC2D1AQ6P1N0 951 aaPredicted RBP19.2■□□□□ 0.66
PRPF40B-215ENST00000551418 ADGRF2Q8IZF7 708 aa19.2■□□□□ 0.66
PRPF40B-215ENST00000551418 PDILTQ8N807 584 aa19.2■□□□□ 0.66
PRPF40B-215ENST00000551418 KBTBD7Q8WVZ9 684 aa19.2■□□□□ 0.66
PRPF40B-215ENST00000551418 MYRFLQ96LU7 910 aa19.2■□□□□ 0.66
PRPF40B-215ENST00000551418 ECT2Q9H8V3 914 aa19.2■□□□□ 0.66
PRPF40B-215ENST00000551418 KIF9Q9HAQ2 790 aa19.2■□□□□ 0.66
PRPF40B-215ENST00000551418 ABCB6Q9NP58 842 aa19.2■□□□□ 0.66
PRPF40B-215ENST00000551418 GCNT4Q9P109 453 aa19.2■□□□□ 0.66
PRPF40B-215ENST00000551418 ITGA11Q9UKX5 1188 aa19.2■□□□□ 0.66
PRPF40B-215ENST00000551418 SLC8A2Q9UPR5 921 aa19.2■□□□□ 0.66
PRPF40B-215ENST00000551418 NME7Q9Y5B8 376 aa19.2■□□□□ 0.66
PRPF40B-215ENST00000551418 KIAA1549LQ6ZVL6 1849 aa19.19■□□□□ 0.66
PRPF40B-215ENST00000551418 LDHAP00338 332 aaKnown RBP19.19■□□□□ 0.66
PRPF40B-215ENST00000551418 STAT6P42226 847 aa19.19■□□□□ 0.66
PRPF40B-215ENST00000551418 RAP1GAPP47736 663 aa19.19■□□□□ 0.66
PRPF40B-215ENST00000551418 ZNF77Q15935 545 aa19.19■□□□□ 0.66
PRPF40B-215ENST00000551418 FAM171BQ6P995 826 aa19.19■□□□□ 0.66
PRPF40B-215ENST00000551418 LIMS2Q7Z4I7 341 aa19.19■□□□□ 0.66
PRPF40B-215ENST00000551418 CBWD2Q8IUF1 395 aa19.19■□□□□ 0.66
PRPF40B-215ENST00000551418 SPATA2LQ8IUW3 424 aaPredicted RBP19.19■□□□□ 0.66
PRPF40B-215ENST00000551418 TMEM86AQ8N2M4 240 aa19.19■□□□□ 0.66
PRPF40B-215ENST00000551418 TRMT2BQ96GJ1 504 aaKnown RBP19.19■□□□□ 0.66
PRPF40B-215ENST00000551418 P2RY13Q9BPV8 354 aa19.19■□□□□ 0.66
PRPF40B-215ENST00000551418 CRTAC1Q9NQ79 661 aa19.19■□□□□ 0.66
PRPF40B-215ENST00000551418 FOXD4L1Q9NU39 408 aa19.19■□□□□ 0.66
PRPF40B-215ENST00000551418 INTS13Q9NVM9 706 aa19.19■□□□□ 0.66
PRPF40B-215ENST00000551418 DUS2Q9NX74 493 aaKnown RBP19.19■□□□□ 0.66
PRPF40B-215ENST00000551418 ZMYM5Q9UJ78 669 aa19.19■□□□□ 0.66
PRPF40B-215ENST00000551418 MAP1BP46821 2468 aaKnown RBP19.19■□□□□ 0.66
PRPF40B-215ENST00000551418 CHD8Q9HCK8 2581 aa19.19■□□□□ 0.66
PRPF40B-215ENST00000551418 DCLK1O15075 740 aa19.18■□□□□ 0.66
PRPF40B-215ENST00000551418 PDGFRBP09619 1106 aa19.18■□□□□ 0.66
PRPF40B-215ENST00000551418 TMEM191BP0C7N4 346 aa19.18■□□□□ 0.66
PRPF40B-215ENST00000551418 KCNA4P22459 653 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms