RNA–Protein interactions for RNA: ENST00000551355.5

NEK3-203, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-203ENST00000551355 KIF2AO00139 706 aaPredicted RBP11.01□□□□□ -0.65
NEK3-203ENST00000551355 URODP06132 367 aa11.01□□□□□ -0.65
NEK3-203ENST00000551355 FAM200BP0CF97 657 aa11.01□□□□□ -0.65
NEK3-203ENST00000551355 MMP8P22894 467 aa11.01□□□□□ -0.65
NEK3-203ENST00000551355 ACAT1P24752 427 aaKnown RBP11.01□□□□□ -0.65
NEK3-203ENST00000551355 BMPR1AP36894 532 aa11.01□□□□□ -0.65
NEK3-203ENST00000551355 GPD2P43304 727 aa11.01□□□□□ -0.65
NEK3-203ENST00000551355 ACADSBP45954 432 aa11.01□□□□□ -0.65
NEK3-203ENST00000551355 GLUD2P49448 558 aa11.01□□□□□ -0.65
NEK3-203ENST00000551355 GALCP54803 685 aa11.01□□□□□ -0.65
NEK3-203ENST00000551355 DSG1Q02413 1049 aa11.01□□□□□ -0.65
NEK3-203ENST00000551355 ORC1Q13415 861 aa11.01□□□□□ -0.65
NEK3-203ENST00000551355 TCEAL1Q15170 157 aa11.01□□□□□ -0.65
NEK3-203ENST00000551355 SHHQ15465 462 aa11.01□□□□□ -0.65
NEK3-203ENST00000551355 GOLGA7BQ2TAP0 167 aa11.01□□□□□ -0.65
NEK3-203ENST00000551355 PKDCCQ504Y2 493 aa11.01□□□□□ -0.65
NEK3-203ENST00000551355 MDH1BQ5I0G3 518 aa11.01□□□□□ -0.65
NEK3-203ENST00000551355 NAA35Q5VZE5 725 aa11.01□□□□□ -0.65
NEK3-203ENST00000551355 ERICH1Q86X53 443 aa11.01□□□□□ -0.65
NEK3-203ENST00000551355 ZDHHC17Q8IUH5 632 aa11.01□□□□□ -0.65
NEK3-203ENST00000551355 SPATA2LQ8IUW3 424 aaPredicted RBP11.01□□□□□ -0.65
NEK3-203ENST00000551355 RHOT2Q8IXI1 618 aa11.01□□□□□ -0.65
NEK3-203ENST00000551355 SLC2A14Q8TDB8 520 aa11.01□□□□□ -0.65
NEK3-203ENST00000551355 IPO4Q8TEX9 1081 aaKnown RBP11.01□□□□□ -0.65
NEK3-203ENST00000551355 SMARCD1Q96GM5 515 aa11.01□□□□□ -0.65
NEK3-203ENST00000551355 PPP1R13BQ96KQ4 1090 aa11.01□□□□□ -0.65
NEK3-203ENST00000551355 HSFY1Q96LI6 401 aa11.01□□□□□ -0.65
NEK3-203ENST00000551355 GDF15Q99988 308 aa11.01□□□□□ -0.65
NEK3-203ENST00000551355 RTP3Q9BQQ7 232 aa11.01□□□□□ -0.65
NEK3-203ENST00000551355 MED10Q9BTT4 135 aa11.01□□□□□ -0.65
NEK3-203ENST00000551355 DUSP16Q9BY84 665 aa11.01□□□□□ -0.65
NEK3-203ENST00000551355 MRPL47Q9HD33 250 aaKnown RBP11.01□□□□□ -0.65
NEK3-203ENST00000551355 ABCB6Q9NP58 842 aa11.01□□□□□ -0.65
NEK3-203ENST00000551355 CRTAC1Q9NQ79 661 aa11.01□□□□□ -0.65
NEK3-203ENST00000551355 AVENQ9NQS1 362 aaPredicted RBP11.01□□□□□ -0.65
NEK3-203ENST00000551355 FAM49BQ9NUQ9 324 aa11.01□□□□□ -0.65
NEK3-203ENST00000551355 ADAM22Q9P0K1 906 aa11.01□□□□□ -0.65
NEK3-203ENST00000551355 HCSTQ9UBK5 93 aa11.01□□□□□ -0.65
NEK3-203ENST00000551355 MTRRQ9UBK8 725 aa11.01□□□□□ -0.65
NEK3-203ENST00000551355 GTF3C4Q9UKN8 822 aa11.01□□□□□ -0.65
NEK3-203ENST00000551355 NME7Q9Y5B8 376 aa11.01□□□□□ -0.65
NEK3-203ENST00000551355 ALPK3Q96L96 1907 aa11.01□□□□□ -0.65
NEK3-203ENST00000551355 HSFX4A0A1B0GTS1 333 aaPredicted RBP11□□□□□ -0.65
NEK3-203ENST00000551355 HSFX3A0A1B0GWH4 333 aaPredicted RBP11□□□□□ -0.65
NEK3-203ENST00000551355 MYBPHLA2RUH7 354 aa11□□□□□ -0.65
NEK3-203ENST00000551355 TMCO5BA8MYB1 307 aa11□□□□□ -0.65
NEK3-203ENST00000551355 C5orf67F2Z3F1 127 aa11□□□□□ -0.65
NEK3-203ENST00000551355 XPO1O14980 1071 aaKnown RBP11□□□□□ -0.65
NEK3-203ENST00000551355 KIF5CO60282 957 aa11□□□□□ -0.65
NEK3-203ENST00000551355 ZNF500O60304 480 aaPredicted RBP11□□□□□ -0.65
NEK3-203ENST00000551355 TBC1D4O60343 1298 aa11□□□□□ -0.65
NEK3-203ENST00000551355 FGF18O76093 207 aa11□□□□□ -0.65
NEK3-203ENST00000551355 NPR3P17342 541 aa11□□□□□ -0.65
NEK3-203ENST00000551355 PBX3P40426 434 aa11□□□□□ -0.65
NEK3-203ENST00000551355 PLA2G4AP47712 749 aa11□□□□□ -0.65
NEK3-203ENST00000551355 GABRB2P47870 512 aa11□□□□□ -0.65
NEK3-203ENST00000551355 RGS19P49795 217 aa11□□□□□ -0.65
NEK3-203ENST00000551355 GSCP56915 257 aaPredicted RBP11□□□□□ -0.65
NEK3-203ENST00000551355 PSMC1P62191 440 aaKnown RBP11□□□□□ -0.65
NEK3-203ENST00000551355 TAP1Q03518 808 aa11□□□□□ -0.65
NEK3-203ENST00000551355 GPR17Q13304 367 aa11□□□□□ -0.65
NEK3-203ENST00000551355 RAB30Q15771 203 aa11□□□□□ -0.65
NEK3-203ENST00000551355 PSMD5Q16401 504 aa11□□□□□ -0.65
NEK3-203ENST00000551355 CFAP221Q4G0U5 840 aa11□□□□□ -0.65
NEK3-203ENST00000551355 C9orf50Q5SZB4 431 aa11□□□□□ -0.65
NEK3-203ENST00000551355 SLC8B1Q6J4K2 584 aa11□□□□□ -0.65
NEK3-203ENST00000551355 DENND1BQ6P3S1 775 aa11□□□□□ -0.65
NEK3-203ENST00000551355 VSTM1Q6UX27 236 aa11□□□□□ -0.65
NEK3-203ENST00000551355 MON1BQ7L1V2 547 aa11□□□□□ -0.65
NEK3-203ENST00000551355 TMEM173Q86WV6 379 aaPredicted RBP11□□□□□ -0.65
NEK3-203ENST00000551355 PALB2Q86YC2 1186 aa11□□□□□ -0.65
NEK3-203ENST00000551355 PASD1Q8IV76 773 aa11□□□□□ -0.65
NEK3-203ENST00000551355 REXO1L1PQ8IX06 675 aa11□□□□□ -0.65
NEK3-203ENST00000551355 MCOLN2Q8IZK6 566 aa11□□□□□ -0.65
NEK3-203ENST00000551355 FUKQ8N0W3 1084 aa11□□□□□ -0.65
NEK3-203ENST00000551355 C1orf131Q8NDD1 294 aaKnown RBP11□□□□□ -0.65
NEK3-203ENST00000551355 OR10T2Q8NGX3 314 aa11□□□□□ -0.65
NEK3-203ENST00000551355 BCL7CQ8WUZ0 217 aaPredicted RBP11□□□□□ -0.65
NEK3-203ENST00000551355 SLC35F5Q8WV83 523 aa11□□□□□ -0.65
NEK3-203ENST00000551355 CPA5Q8WXQ8 436 aa11□□□□□ -0.65
NEK3-203ENST00000551355 RIN2Q8WYP3 895 aaPredicted RBP11□□□□□ -0.65
NEK3-203ENST00000551355 RFFLQ8WZ73 363 aa11□□□□□ -0.65
NEK3-203ENST00000551355 C18orf8Q96DM3 657 aa11□□□□□ -0.65
NEK3-203ENST00000551355 PCED1BQ96HM7 432 aa11□□□□□ -0.65
NEK3-203ENST00000551355 CEP295NLQ96MC4 621 aa11□□□□□ -0.65
NEK3-203ENST00000551355 PKMYT1Q99640 499 aa11□□□□□ -0.65
NEK3-203ENST00000551355 C11orf84Q9BUA3 381 aaPredicted RBP11□□□□□ -0.65
NEK3-203ENST00000551355 B3GNT5Q9BYG0 378 aa11□□□□□ -0.65
NEK3-203ENST00000551355 SYNCQ9H7C4 482 aa11□□□□□ -0.65
NEK3-203ENST00000551355 PNPLA8Q9NP80 782 aa11□□□□□ -0.65
NEK3-203ENST00000551355 MRPL17Q9NRX2 175 aaKnown RBP11□□□□□ -0.65
NEK3-203ENST00000551355 PARVAQ9NVD7 372 aa11□□□□□ -0.65
NEK3-203ENST00000551355 TRMT1Q9NXH9 659 aaKnown RBP11□□□□□ -0.65
NEK3-203ENST00000551355 UVRAGQ9P2Y5 699 aa11□□□□□ -0.65
NEK3-203ENST00000551355 HSFX1Q9UBD0 423 aa11□□□□□ -0.65
NEK3-203ENST00000551355 PCDHB5Q9Y5E4 795 aa11□□□□□ -0.65
NEK3-203ENST00000551355 SCINQ9Y6U3 715 aa11□□□□□ -0.65
NEK3-203ENST00000551355 TDRD15B5MCY1 1934 aaKnown RBP10.99□□□□□ -0.65
NEK3-203ENST00000551355 SCN1AP35498 2009 aa10.99□□□□□ -0.65
NEK3-203ENST00000551355 LINC01553A4QN01 128 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms