RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 ARHGAP17Q68EM7 881 aa12.14□□□□□ -0.47
RAB5C-208ENST00000551338 CXCL17Q6UXB2 119 aa12.14□□□□□ -0.47
RAB5C-208ENST00000551338 SPOCD1Q6ZMY3 1216 aa12.14□□□□□ -0.47
RAB5C-208ENST00000551338 ACOT1Q86TX2 421 aa12.14□□□□□ -0.47
RAB5C-208ENST00000551338 TTC30AQ86WT1 665 aa12.14□□□□□ -0.47
RAB5C-208ENST00000551338 RCOR2Q8IZ40 523 aa12.14□□□□□ -0.47
RAB5C-208ENST00000551338 EMC1Q8N766 993 aa12.14□□□□□ -0.47
RAB5C-208ENST00000551338 ARRDC4Q8NCT1 418 aa12.14□□□□□ -0.47
RAB5C-208ENST00000551338 FBXO25Q8TCJ0 367 aa12.14□□□□□ -0.47
RAB5C-208ENST00000551338 IPO4Q8TEX9 1081 aaKnown RBP12.14□□□□□ -0.47
RAB5C-208ENST00000551338 UBLCP1Q8WVY7 318 aaPredicted RBP12.14□□□□□ -0.47
RAB5C-208ENST00000551338 HHIPL1Q96JK4 782 aa12.14□□□□□ -0.47
RAB5C-208ENST00000551338 ZNF560Q96MR9 790 aa12.14□□□□□ -0.47
RAB5C-208ENST00000551338 TSPAN18Q96SJ8 248 aa12.14□□□□□ -0.47
RAB5C-208ENST00000551338 HEMGNQ9BXL5 484 aa12.14□□□□□ -0.47
RAB5C-208ENST00000551338 EPB41L4BQ9H329 900 aa12.14□□□□□ -0.47
RAB5C-208ENST00000551338 DDX56Q9NY93 547 aaKnown RBP12.14□□□□□ -0.47
RAB5C-208ENST00000551338 PARP2Q9UGN5 583 aa12.14□□□□□ -0.47
RAB5C-208ENST00000551338 PTPN22Q9Y2R2 807 aa12.14□□□□□ -0.47
RAB5C-208ENST00000551338 NEU2Q9Y3R4 380 aa12.14□□□□□ -0.47
RAB5C-208ENST00000551338 NLRC5Q86WI3 1866 aa12.13□□□□□ -0.47
RAB5C-208ENST00000551338 GOLGA6CA6NDK9 693 aa12.13□□□□□ -0.47
RAB5C-208ENST00000551338 SPTLC1O15269 473 aa12.13□□□□□ -0.47
RAB5C-208ENST00000551338 XPOTO43592 962 aaKnown RBP12.13□□□□□ -0.47
RAB5C-208ENST00000551338 HCRTO43612 131 aa12.13□□□□□ -0.47
RAB5C-208ENST00000551338 PGK1P00558 417 aa12.13□□□□□ -0.47
RAB5C-208ENST00000551338 CD4P01730 458 aa12.13□□□□□ -0.47
RAB5C-208ENST00000551338 KRT14P02533 472 aa12.13□□□□□ -0.47
RAB5C-208ENST00000551338 GOLGA6DP0CG33 693 aa12.13□□□□□ -0.47
RAB5C-208ENST00000551338 SETSIPP0DME0 302 aa12.13□□□□□ -0.47
RAB5C-208ENST00000551338 KRT10P13645 584 aa12.13□□□□□ -0.47
RAB5C-208ENST00000551338 IL1R2P27930 398 aa12.13□□□□□ -0.47
RAB5C-208ENST00000551338 FLT3LGP49771 235 aa12.13□□□□□ -0.47
RAB5C-208ENST00000551338 PLTPP55058 493 aa12.13□□□□□ -0.47
RAB5C-208ENST00000551338 PRKCZQ05513 592 aa12.13□□□□□ -0.47
RAB5C-208ENST00000551338 DHX9Q08211 1270 aaKnown RBP12.13□□□□□ -0.47
RAB5C-208ENST00000551338 ADCY2Q08462 1091 aa12.13□□□□□ -0.47
RAB5C-208ENST00000551338 MGAT3Q09327 533 aa12.13□□□□□ -0.47
RAB5C-208ENST00000551338 SOWAHAQ2M3V2 549 aa12.13□□□□□ -0.47
RAB5C-208ENST00000551338 NBPF20Q3BBV1 942 aa12.13□□□□□ -0.47
RAB5C-208ENST00000551338 GNASQ5JWF2 1037 aa12.13□□□□□ -0.47
RAB5C-208ENST00000551338 PPP1R26Q5T8A7 1209 aaPredicted RBP12.13□□□□□ -0.47
RAB5C-208ENST00000551338 FAM102AQ5T9C2 384 aaPredicted RBP12.13□□□□□ -0.47
RAB5C-208ENST00000551338 GDF6Q6KF10 455 aaPredicted RBP12.13□□□□□ -0.47
RAB5C-208ENST00000551338 TRNP1Q6NT89 227 aa12.13□□□□□ -0.47
RAB5C-208ENST00000551338 RHBDF2Q6PJF5 856 aa12.13□□□□□ -0.47
RAB5C-208ENST00000551338 FAM183BPQ6ZVS7 135 aa12.13□□□□□ -0.47
RAB5C-208ENST00000551338 SYDE1Q6ZW31 735 aaPredicted RBP12.13□□□□□ -0.47
RAB5C-208ENST00000551338 ZNF771Q7L3S4 317 aaPredicted RBP12.13□□□□□ -0.47
RAB5C-208ENST00000551338 DPH6Q7L8W6 267 aa12.13□□□□□ -0.47
RAB5C-208ENST00000551338 LIMS2Q7Z4I7 341 aa12.13□□□□□ -0.47
RAB5C-208ENST00000551338 POLNQ7Z5Q5 900 aa12.13□□□□□ -0.47
RAB5C-208ENST00000551338 UNC93AQ86WB7 457 aa12.13□□□□□ -0.47
RAB5C-208ENST00000551338 C12orf29Q8N999 325 aa12.13□□□□□ -0.47
RAB5C-208ENST00000551338 GRK7Q8WTQ7 553 aa12.13□□□□□ -0.47
RAB5C-208ENST00000551338 KBTBD7Q8WVZ9 684 aa12.13□□□□□ -0.47
RAB5C-208ENST00000551338 RAPGEF5Q92565 580 aa12.13□□□□□ -0.47
RAB5C-208ENST00000551338 ART4Q93070 314 aa12.13□□□□□ -0.47
RAB5C-208ENST00000551338 ACSF2Q96CM8 615 aaPredicted RBP12.13□□□□□ -0.47
RAB5C-208ENST00000551338 FAM129AQ9BZQ8 928 aa12.13□□□□□ -0.47
RAB5C-208ENST00000551338 DPEP3Q9H4B8 488 aa12.13□□□□□ -0.47
RAB5C-208ENST00000551338 GOLGA2P5Q9HBQ8 144 aa12.13□□□□□ -0.47
RAB5C-208ENST00000551338 TMBIM4Q9HC24 238 aa12.13□□□□□ -0.47
RAB5C-208ENST00000551338 FAM49BQ9NUQ9 324 aa12.13□□□□□ -0.47
RAB5C-208ENST00000551338 GOLGA6AQ9NYA3 693 aa12.13□□□□□ -0.47
RAB5C-208ENST00000551338 WHRNQ9P202 907 aa12.13□□□□□ -0.47
RAB5C-208ENST00000551338 C3orf70A6NLC5 250 aaPredicted RBP12.12□□□□□ -0.47
RAB5C-208ENST00000551338 E5RJQ4 531 aa12.12□□□□□ -0.47
RAB5C-208ENST00000551338 TULP2O00295 520 aa12.12□□□□□ -0.47
RAB5C-208ENST00000551338 PTGESO14684 152 aa12.12□□□□□ -0.47
RAB5C-208ENST00000551338 SEPT4O43236 478 aa12.12□□□□□ -0.47
RAB5C-208ENST00000551338 FGFR1P11362 822 aa12.12□□□□□ -0.47
RAB5C-208ENST00000551338 ATF7P17544 494 aaPredicted RBP12.12□□□□□ -0.47
RAB5C-208ENST00000551338 GPD1P21695 349 aa12.12□□□□□ -0.47
RAB5C-208ENST00000551338 IVDP26440 423 aa12.12□□□□□ -0.47
RAB5C-208ENST00000551338 CETN2P41208 172 aa12.12□□□□□ -0.47
RAB5C-208ENST00000551338 CDKN2BP42772 138 aa12.12□□□□□ -0.47
RAB5C-208ENST00000551338 RGS7P49802 495 aa12.12□□□□□ -0.47
RAB5C-208ENST00000551338 TAF6P49848 677 aa12.12□□□□□ -0.47
RAB5C-208ENST00000551338 COPS2P61201 443 aa12.12□□□□□ -0.47
RAB5C-208ENST00000551338 ZNF844Q08AG5 666 aa12.12□□□□□ -0.47
RAB5C-208ENST00000551338 PPP1R7Q15435 360 aa12.12□□□□□ -0.47
RAB5C-208ENST00000551338 FBXO47Q5MNV8 452 aa12.12□□□□□ -0.47
RAB5C-208ENST00000551338 CEP85LQ5SZL2 805 aa12.12□□□□□ -0.47
RAB5C-208ENST00000551338 CYP4F22Q6NT55 531 aa12.12□□□□□ -0.47
RAB5C-208ENST00000551338 OSTM1Q86WC4 334 aa12.12□□□□□ -0.47
RAB5C-208ENST00000551338 SH2D3CQ8N5H7 860 aa12.12□□□□□ -0.47
RAB5C-208ENST00000551338 GOLGA6L1Q8N7Z2 621 aa12.12□□□□□ -0.47
RAB5C-208ENST00000551338 OR2W6PQ8NHA6 318 aa12.12□□□□□ -0.47
RAB5C-208ENST00000551338 FAM76AQ8TAV0 307 aa12.12□□□□□ -0.47
RAB5C-208ENST00000551338 PIWIL1Q96J94 861 aaKnown RBP12.12□□□□□ -0.47
RAB5C-208ENST00000551338 FAM118BQ9BPY3 351 aa12.12□□□□□ -0.47
RAB5C-208ENST00000551338 LPIN3Q9BQK8 851 aa12.12□□□□□ -0.47
RAB5C-208ENST00000551338 SLC4A5Q9BY07 1137 aa12.12□□□□□ -0.47
RAB5C-208ENST00000551338 SYNCQ9H7C4 482 aa12.12□□□□□ -0.47
RAB5C-208ENST00000551338 HOMER3Q9NSC5 361 aa12.12□□□□□ -0.47
RAB5C-208ENST00000551338 GDAP2Q9NXN4 497 aa12.12□□□□□ -0.47
RAB5C-208ENST00000551338 MTRF1LQ9UGC7 380 aaKnown RBP12.12□□□□□ -0.47
RAB5C-208ENST00000551338 ATP8A1Q9Y2Q0 1164 aa12.12□□□□□ -0.47
RAB5C-208ENST00000551338 LRRD1A4D1F6 860 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms